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The map label for this gene is ybgK [C]

Identifier: 146340742

GI number: 146340742

Start: 3968845

End: 3969873

Strand: Reverse

Name: ybgK [C]

Synonym: BRADO3797

Alternate gene names: 146340742

Gene position: 3969873-3968845 (Counterclockwise)

Preceding gene: 146340743

Following gene: 146340741

Centisome position: 53.24

GC content: 67.93

Gene sequence:

>1029_bases
ATGCTCGTCGTTGCGCAGATCGGTCCGGCAAGCTCGGTGCAGGATGGTGGCCGCTTCGGCGCGCAGCGCTACGGGCTGAC
GCCATCGGGCGCGATGGATAAGCTGGCGCTGGCGGCGGCGAACAGCCTCGTCGGCAACGCGCTGACGGCCGCCGCGATCG
AGATCGGTCCGTTCGGTGCGACGTTTGTCGCCAGGGGCGGCGCTTTGCGCGTGGCGCTGTCCGGCGCAGCGCGGCCCGCT
GATGTGGCCAAACGTCCTGTCGAGATGAATACGTCGGTCACCTTGAACGAGGGCGACAGGCTGACGCTCGGCTTCGCGCG
CGGCGGCTCGTTCAGCTATCTCGCCATCGAAGGCGGCATCGCCGGTGAGCCGATGTTCGACAGTTTGTCGGTCAATGCGC
GTGCGGGACTGGGCAGCCCCTACCCGCGCCCGCTGCAGTCGGGCGATGTGTTCCAGACGGCGCCTGCGAGTCAGACCCCG
GAGATGCGGATCGAGCTCCCGAAGACAAGCGGCGCGATCCGGGTCGTCATGGGGCCGCAGGACGACGAGTTCAGCAACGA
GATGAAGGCGCTGTTCCTGGGCAGCGACTGGACGGTCTCGGCAACCAGCGACCGCATGGGCTATCGCCTCGAAGGTCCGG
TGATCCGTCATTTGCACGGCCACAACATCGTTTCCGACGGCACCGTGGAGGGCAGCATCCAGGTGCCCGGCAACGGCTCG
CCGATCGTGCTGATGTCCGACCGCGGCACCAGCGGCGGCTATCCGAAGATCGCGACCGTCATCACTGCTGATTTCGGCCG
TCTGGCGCAGACGCCGGCCGGCACGCCGTTCCGCTTCCAGGCGGTGAGCATGGCCGAGGCCCAGGCCGAACTGCGGCGCT
ACAGGGATCTGCTGCGCAGCCTGCCGGATCGTGTCCGCGAGCTGACGAGCAGCGAGTTCGACGTGGACGCGCTGTTCACG
GCCAACGTGGCCGGGCATGCCGTCAGCGCAACCGACGTCACCACCTGGCCCGGAGTGACGCCCGATTAA

Upstream 100 bases:

>100_bases
ACGAGGTCAGCTTCACGGCGGTGGACGAGAAGATCTTCGCCGAGCAGGAGCGCGCGGCCGCAGCCGGCGAGCTCATCGCG
GAGCGGATCGCGGCATGAGC

Downstream 100 bases:

>100_bases
CCTGATCGCCGCTAACGCTGTTTCCGACCCCTCAACGCGCGGAGCCCTGACATGACCAGCACCGTCGACCTGAACTGCGA
CCTCGGAGAAAGCTTTGGCC

Product: putative carboxylase, like RuBisCO small subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MLVVAQIGPASSVQDGGRFGAQRYGLTPSGAMDKLALAAANSLVGNALTAAAIEIGPFGATFVARGGALRVALSGAARPA
DVAKRPVEMNTSVTLNEGDRLTLGFARGGSFSYLAIEGGIAGEPMFDSLSVNARAGLGSPYPRPLQSGDVFQTAPASQTP
EMRIELPKTSGAIRVVMGPQDDEFSNEMKALFLGSDWTVSATSDRMGYRLEGPVIRHLHGHNIVSDGTVEGSIQVPGNGS
PIVLMSDRGTSGGYPKIATVITADFGRLAQTPAGTPFRFQAVSMAEAQAELRRYRDLLRSLPDRVRELTSSEFDVDALFT
ANVAGHAVSATDVTTWPGVTPD

Sequences:

>Translated_342_residues
MLVVAQIGPASSVQDGGRFGAQRYGLTPSGAMDKLALAAANSLVGNALTAAAIEIGPFGATFVARGGALRVALSGAARPA
DVAKRPVEMNTSVTLNEGDRLTLGFARGGSFSYLAIEGGIAGEPMFDSLSVNARAGLGSPYPRPLQSGDVFQTAPASQTP
EMRIELPKTSGAIRVVMGPQDDEFSNEMKALFLGSDWTVSATSDRMGYRLEGPVIRHLHGHNIVSDGTVEGSIQVPGNGS
PIVLMSDRGTSGGYPKIATVITADFGRLAQTPAGTPFRFQAVSMAEAQAELRRYRDLLRSLPDRVRELTSSEFDVDALFT
ANVAGHAVSATDVTTWPGVTPD
>Mature_342_residues
MLVVAQIGPASSVQDGGRFGAQRYGLTPSGAMDKLALAAANSLVGNALTAAAIEIGPFGATFVARGGALRVALSGAARPA
DVAKRPVEMNTSVTLNEGDRLTLGFARGGSFSYLAIEGGIAGEPMFDSLSVNARAGLGSPYPRPLQSGDVFQTAPASQTP
EMRIELPKTSGAIRVVMGPQDDEFSNEMKALFLGSDWTVSATSDRMGYRLEGPVIRHLHGHNIVSDGTVEGSIQVPGNGS
PIVLMSDRGTSGGYPKIATVITADFGRLAQTPAGTPFRFQAVSMAEAQAELRRYRDLLRSLPDRVRELTSSEFDVDALFT
ANVAGHAVSATDVTTWPGVTPD

Specific function: Unknown

COG id: COG1984

COG function: function code E; Allophanate hydrolase subunit 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycsJ and yeast urea amidolyase (DUR1,2) [H]

Homologues:

Organism=Escherichia coli, GI1786930, Length=306, Percent_Identity=37.5816993464052, Blast_Score=176, Evalue=2e-45,
Organism=Saccharomyces cerevisiae, GI6319685, Length=332, Percent_Identity=27.1084337349398, Blast_Score=86, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003778
- InterPro:   IPR002130 [H]

Pfam domain/function: PF02626 AHS2 [H]

EC number: NA

Molecular weight: Translated: 35738; Mature: 35738

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVVAQIGPASSVQDGGRFGAQRYGLTPSGAMDKLALAAANSLVGNALTAAAIEIGPFGA
CEEEEECCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCHHEEEEEEECCCCC
TFVARGGALRVALSGAARPADVAKRPVEMNTSVTLNEGDRLTLGFARGGSFSYLAIEGGI
CEEECCCEEEEEECCCCCCHHHHCCCEECCCEEEECCCCEEEEEEECCCCEEEEEEECCC
AGEPMFDSLSVNARAGLGSPYPRPLQSGDVFQTAPASQTPEMRIELPKTSGAIRVVMGPQ
CCCCCCCCEECEECCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEECCCCCEEEEEECCC
DDEFSNEMKALFLGSDWTVSATSDRMGYRLEGPVIRHLHGHNIVSDGTVEGSIQVPGNGS
CCCCCCCEEEEEECCCEEEEECCCCCCEEECCCCEEEECCCCEECCCEEEEEEEECCCCC
PIVLMSDRGTSGGYPKIATVITADFGRLAQTPAGTPFRFQAVSMAEAQAELRRYRDLLRS
CEEEECCCCCCCCCCEEEEEEECCHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHH
LPDRVRELTSSEFDVDALFTANVAGHAVSATDVTTWPGVTPD
HHHHHHHHHCCCCCEEEEEEECCCCCEEECCCCCCCCCCCCC
>Mature Secondary Structure
MLVVAQIGPASSVQDGGRFGAQRYGLTPSGAMDKLALAAANSLVGNALTAAAIEIGPFGA
CEEEEECCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCHHEEEEEEECCCCC
TFVARGGALRVALSGAARPADVAKRPVEMNTSVTLNEGDRLTLGFARGGSFSYLAIEGGI
CEEECCCEEEEEECCCCCCHHHHCCCEECCCEEEECCCCEEEEEEECCCCEEEEEEECCC
AGEPMFDSLSVNARAGLGSPYPRPLQSGDVFQTAPASQTPEMRIELPKTSGAIRVVMGPQ
CCCCCCCCEECEECCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEECCCCCEEEEEECCC
DDEFSNEMKALFLGSDWTVSATSDRMGYRLEGPVIRHLHGHNIVSDGTVEGSIQVPGNGS
CCCCCCCEEEEEECCCEEEEECCCCCCEEECCCCEEEECCCCEECCCEEEEEEEECCCCC
PIVLMSDRGTSGGYPKIATVITADFGRLAQTPAGTPFRFQAVSMAEAQAELRRYRDLLRS
CEEEECCCCCCCCCCEEEEEEECCHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHH
LPDRVRELTSSEFDVDALFTANVAGHAVSATDVTTWPGVTPD
HHHHHHHHHCCCCCEEEEEEECCCCCEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]