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The map label for this gene is yfdZ [C]

Identifier: 146340469

GI number: 146340469

Start: 3692490

End: 3693689

Strand: Direct

Name: yfdZ [C]

Synonym: BRADO3509

Alternate gene names: 146340469

Gene position: 3692490-3693689 (Clockwise)

Preceding gene: 146340466

Following gene: 146340470

Centisome position: 49.52

GC content: 66.75

Gene sequence:

>1200_bases
ATGGTGGATGCGACAGTGATACCGACATTGGAACAGCGGCTCGCCAGCCTGACGGCGCCCTCCGCCCGCAGCAATGTTCC
GCCGTTCATGGTGATGGACGTGATGGCCGCGGCCGAGCGCATCGAGGCGGGCGGCGGCCATGTCATCCACATGGAGGTCG
GCCAGCCGGCCGCGCCGGCACCGCGAACCGCGATTGCTGCCGCCCATGCGGCGCTCGACCAGGCCCGTATCGATTACACG
TCGGCGCTGGGACTTTCGTCGCTGCGCCAGCGAATCGCGCGTCACTATCACGAGACTCATGCGTGCGAGATCGATCCGGC
GCGGATCGTGATCACCACGGGATCCTCGGCGGGATTCATCCTGGCCTTCCTGGCGATGTTCGAGCCCGGCGACCGCGTCG
CCGTCACGGTGCCAGGCTATCCGCCTTATCGCCACATCCTCACCGCGCTCGGCTGCGAGCCGGTGCTGATCGAGACCACC
GCCGAGAACCGACACGCCCTGACCGGCGAGGCACTGCTGGCGGCGCATCGCGAGACCCCGTTGAAGGGCGTGCTGGTGGC
GAGCCCGGCCAATCCCACGGGCACGATGATGTCGCGCGAGGCGCTGGGCGGCGTCATCGCGGCGGCGCGCGGCGCCGGCA
TCCGCTTCATCTCCGACGAGATCTATCACGGGCTCGACTACGCGTTTCCGGCGGTCACCGCGGCGGAGCTGTCGCCGGAC
GCGCTGATCATCAACTCGTTCTCGAAATACTTCTGCATGACCGGCTGGCGCATCGGCTGGATGGTGGTGCCGGATGCGCT
GGTGCGTCCGATCGAGCGCCTGCAGCAAAACCTCGCGATCTCGGTTCCCACCTTGTCGCAGATTGCGGCCGAAGCGGCGT
TCGATGGCCGGCCGGAAATGGACGCGATCAAGCATGGTTATCAGGAGAACCGCCGCATCCTGATCGAGGGTCTTCCGAAG
GCGGGTCTGAGCCGGTTCCTGCCGGCCGACGGCGCATTCTATCTCTACGCCGATGTGTCTGACTTCACGACCGACAGCTT
CGACTTTGCCAAGCGGATGCTGGAGGAGACCCATGTCGCTGCGACGCCCGGCGTCGACTTCGATCCGATCCACGGCCGCA
GCTTCGTGCGCTTCTCCTATGCACGCTCGGCTGACGACATGCGCGAGGCGGTGGCCCGGATCGCACGTTGGCTCGGCTAG

Upstream 100 bases:

>100_bases
GAATGCGGCCCAAATCAGATCCCACGACCCGGTCATTTGGGGCCTGCGTCCGCCGATCGAGAGAGCGGGTCCGAACAGCC
GGGGTCAATAGCAGATATCG

Downstream 100 bases:

>100_bases
GGCAGGGCTCTCCGGCGATCCTTCGTCGTCATTGACTCGGCCGCGACAAACTGTCTGAGGTGCGCCGCGCACGGGCTGGG
ACAAGCGACGCCCGATAGAC

Product: putative aminotransferase

Products: NA

Alternate protein names: AspAT; Transaminase A [H]

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MVDATVIPTLEQRLASLTAPSARSNVPPFMVMDVMAAAERIEAGGGHVIHMEVGQPAAPAPRTAIAAAHAALDQARIDYT
SALGLSSLRQRIARHYHETHACEIDPARIVITTGSSAGFILAFLAMFEPGDRVAVTVPGYPPYRHILTALGCEPVLIETT
AENRHALTGEALLAAHRETPLKGVLVASPANPTGTMMSREALGGVIAAARGAGIRFISDEIYHGLDYAFPAVTAAELSPD
ALIINSFSKYFCMTGWRIGWMVVPDALVRPIERLQQNLAISVPTLSQIAAEAAFDGRPEMDAIKHGYQENRRILIEGLPK
AGLSRFLPADGAFYLYADVSDFTTDSFDFAKRMLEETHVAATPGVDFDPIHGRSFVRFSYARSADDMREAVARIARWLG

Sequences:

>Translated_399_residues
MVDATVIPTLEQRLASLTAPSARSNVPPFMVMDVMAAAERIEAGGGHVIHMEVGQPAAPAPRTAIAAAHAALDQARIDYT
SALGLSSLRQRIARHYHETHACEIDPARIVITTGSSAGFILAFLAMFEPGDRVAVTVPGYPPYRHILTALGCEPVLIETT
AENRHALTGEALLAAHRETPLKGVLVASPANPTGTMMSREALGGVIAAARGAGIRFISDEIYHGLDYAFPAVTAAELSPD
ALIINSFSKYFCMTGWRIGWMVVPDALVRPIERLQQNLAISVPTLSQIAAEAAFDGRPEMDAIKHGYQENRRILIEGLPK
AGLSRFLPADGAFYLYADVSDFTTDSFDFAKRMLEETHVAATPGVDFDPIHGRSFVRFSYARSADDMREAVARIARWLG
>Mature_399_residues
MVDATVIPTLEQRLASLTAPSARSNVPPFMVMDVMAAAERIEAGGGHVIHMEVGQPAAPAPRTAIAAAHAALDQARIDYT
SALGLSSLRQRIARHYHETHACEIDPARIVITTGSSAGFILAFLAMFEPGDRVAVTVPGYPPYRHILTALGCEPVLIETT
AENRHALTGEALLAAHRETPLKGVLVASPANPTGTMMSREALGGVIAAARGAGIRFISDEIYHGLDYAFPAVTAAELSPD
ALIINSFSKYFCMTGWRIGWMVVPDALVRPIERLQQNLAISVPTLSQIAAEAAFDGRPEMDAIKHGYQENRRILIEGLPK
AGLSRFLPADGAFYLYADVSDFTTDSFDFAKRMLEETHVAATPGVDFDPIHGRSFVRFSYARSADDMREAVARIARWLG

Specific function: Unknown

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI95147551, Length=407, Percent_Identity=24.5700245700246, Blast_Score=121, Evalue=1e-27,
Organism=Homo sapiens, GI169881279, Length=407, Percent_Identity=24.5700245700246, Blast_Score=121, Evalue=1e-27,
Organism=Homo sapiens, GI56713256, Length=381, Percent_Identity=24.4094488188976, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI56713254, Length=363, Percent_Identity=25.068870523416, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI169881281, Length=253, Percent_Identity=25.296442687747, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI4507369, Length=377, Percent_Identity=24.1379310344828, Blast_Score=85, Evalue=1e-16,
Organism=Escherichia coli, GI1788722, Length=367, Percent_Identity=28.3378746594005, Blast_Score=116, Evalue=3e-27,
Organism=Escherichia coli, GI1786816, Length=355, Percent_Identity=25.6338028169014, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI1788627, Length=395, Percent_Identity=26.0759493670886, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1787710, Length=326, Percent_Identity=28.5276073619632, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1790797, Length=244, Percent_Identity=27.4590163934426, Blast_Score=72, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI71994472, Length=396, Percent_Identity=24.7474747474747, Blast_Score=102, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI71994476, Length=396, Percent_Identity=24.7474747474747, Blast_Score=101, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI17567369, Length=391, Percent_Identity=24.2966751918159, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17567663, Length=369, Percent_Identity=24.9322493224932, Blast_Score=87, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6322401, Length=391, Percent_Identity=23.0179028132992, Blast_Score=89, Evalue=1e-18,
Organism=Drosophila melanogaster, GI28573069, Length=354, Percent_Identity=21.1864406779661, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24646114, Length=354, Percent_Identity=21.1864406779661, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI28573067, Length=354, Percent_Identity=21.1864406779661, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI28573065, Length=354, Percent_Identity=21.1864406779661, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI18859735, Length=374, Percent_Identity=24.331550802139, Blast_Score=77, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001176
- InterPro:   IPR004839
- InterPro:   IPR004838
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: =2.6.1.1 [H]

Molecular weight: Translated: 43091; Mature: 43091

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDATVIPTLEQRLASLTAPSARSNVPPFMVMDVMAAAERIEAGGGHVIHMEVGQPAAPA
CCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC
PRTAIAAAHAALDQARIDYTSALGLSSLRQRIARHYHETHACEIDPARIVITTGSSAGFI
CHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHH
LAFLAMFEPGDRVAVTVPGYPPYRHILTALGCEPVLIETTAENRHALTGEALLAAHRETP
HHHHHHCCCCCEEEEECCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCC
LKGVLVASPANPTGTMMSREALGGVIAAARGAGIRFISDEIYHGLDYAFPAVTAAELSPD
CCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHCCHHHHHCCCHHHCCCC
ALIINSFSKYFCMTGWRIGWMVVPDALVRPIERLQQNLAISVPTLSQIAAEAAFDGRPEM
EEEECCHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCEECCCHHHHHHHHHHCCCCCCH
DAIKHGYQENRRILIEGLPKAGLSRFLPADGAFYLYADVSDFTTDSFDFAKRMLEETHVA
HHHHCCHHCCCEEEEECCCHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCE
ATPGVDFDPIHGRSFVRFSYARSADDMREAVARIARWLG
ECCCCCCCCCCCCCEEEEEHHCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVDATVIPTLEQRLASLTAPSARSNVPPFMVMDVMAAAERIEAGGGHVIHMEVGQPAAPA
CCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC
PRTAIAAAHAALDQARIDYTSALGLSSLRQRIARHYHETHACEIDPARIVITTGSSAGFI
CHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHH
LAFLAMFEPGDRVAVTVPGYPPYRHILTALGCEPVLIETTAENRHALTGEALLAAHRETP
HHHHHHCCCCCEEEEECCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCC
LKGVLVASPANPTGTMMSREALGGVIAAARGAGIRFISDEIYHGLDYAFPAVTAAELSPD
CCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHCCHHHHHCCCHHHCCCC
ALIINSFSKYFCMTGWRIGWMVVPDALVRPIERLQQNLAISVPTLSQIAAEAAFDGRPEM
EEEECCHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCEECCCHHHHHHHHHHCCCCCCH
DAIKHGYQENRRILIEGLPKAGLSRFLPADGAFYLYADVSDFTTDSFDFAKRMLEETHVA
HHHHCCHHCCCEEEEECCCHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCE
ATPGVDFDPIHGRSFVRFSYARSADDMREAVARIARWLG
ECCCCCCCCCCCCCEEEEEHHCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]