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The map label for this gene is fadE25 [H]

Identifier: 146340423

GI number: 146340423

Start: 3637979

End: 3639688

Strand: Direct

Name: fadE25 [H]

Synonym: BRADO3459

Alternate gene names: 146340423

Gene position: 3637979-3639688 (Clockwise)

Preceding gene: 146340419

Following gene: 146340425

Centisome position: 48.79

GC content: 70.06

Gene sequence:

>1710_bases
ATGACCCGCGCCAACGTTCCACCGCTCGACTGCTCCAGCCTGCGAGCTCAACTCGCAGCGCTGCCCGGTCTGGCTCGGCT
GCGAGACCTGTCCGCAGGCTTTGCGGAGGCCGGGGACGAGACAATCGCTGCGATCCTCGAGTCCGCGTCGGCCTTCGCTG
CGGACCGCCTCGAAGCGCTCAACGCTCAGTCGAACAGCGCAGCGCCGCGACTGGTCGACGGGGCAGTCGTCACCTCCGAC
CTGCATGGACGCGTCTGGCGCGAATACGCCGAGAGCGGCTGGATCGCACTCGATCTTCCCGAGCAGCTCGGCGGCCAAGG
GCTGCCGCTGGTGGTCGCCGTTGCCGTTCAGGAAGTGTTCGACCGCCATTGCGCCGCCTTCGGCATGCTGCCGGTACCGG
TGCGCTCGGCGGTGCGGCTGATCGAAGCCTGGACGACGGACGACATGATCCGATCAGAATGGCTGCCGAAGCTGATCGCG
GGTGAGTGGGGCGCCACGATCTGTATCTCGGAAGTCGGCGCCGGCTCCGACGTGAGCCGCATCCGGACCAAGGCTGTGCC
GCGCGGCGACGGCCGCTGGTCGATCACCGGGGAGAAGCAATGGATCTCGTTCGGCGGCCATGACCTGACCAACCGCATCG
TGCACTGCCTGCTGGCGCGCACCGAGGGAGCCAAAGGGTTGTCGCTGTTTCTGGTGCCCGACCGTATCGATGGCGCCGCG
AACGGTGTGGTCGTGCGTAAGCTTGAGCACAAACTCGGCCTTCATCTGTCGCCGACCTGCGCGATGGGCTTCGAGGACGC
GATTGGCCATCTGCTCGGCGAGGAGGGCCGCGGGCTGGCGCAGATGTTCGTGATGATCACCAACATGCGGATGGCGGTCG
GCGCGATGGGGCTCGGCATCGCCTCTGCGGCTGCCGACGTTGCGCTCGCTTATGCGCGGCAACGCCTGCAAGGCGGCGCG
GGGCCGCAGCCGCTGCCGATCATCGTGCACGCCGACGTGCAGCGCACGCTGCTGTCGATGCAGGCGGACGTCGAATGCGC
TCGCGCGCTGATCTACGCCGCCGCGGTCGAGGCCGATCTCGCGCGCGTCGAGACCAACGATGATGCGCGCCGCGACAGTG
CCGCGCTGGCGCAATGGCTGTTGCCGATCGTCAAGACGCTCGGCGGCGAGCTCGCCTTTGCGACGGCCGACAGCGCCATC
CAGGTGCTCGGCGGTGCCGGCTACACCACGGACTGGCCCGTCGAGCAGCTGCTGCGCGACTCGCGCGTGCTGCCGATCTT
CGAGGGTACGACCGGGATGCAGGGGCTCGACCTCCTGCACCGCCGGCTGTGGAAGGACGGCGGCGAGGGCCTTCGCGCGT
TCCTCTCGCGCGCCCGGGCCGACATCGCGCCGTTGGCGGAACGCGACGTCGCGGCCGCCACCGAGATCATCGATTTGCTG
GAGACGACGGCCGGACAGCTCGCCCGGATGCGCGACACCCCGCGTGATGGCGAGGCCGGCGCGACGGGGTTCCTGCACCT
CGCCATCGACGCCGCGCTGACGTGGTCGGCAGCGCGGCTCGGCGCGCTTCGCAACGACACGCCGGCCGGCGCCCGGCTGC
GTGCGCTCGGCAGCTTCCAGCTCGGCGAGCTTGTCGGGCGGGCACGGCACCACGCCGCGGACGCGCTGCGTGGAGCCGCC
GCCTTGGAGGGCATCGCCACGCTGCTCTGA

Upstream 100 bases:

>100_bases
CCGTCCGGCGGCAGCACACCCGTCGGACGTGACGGCCAGGGTTCCAGCCGGTATGGAAAAGGCAGCCATCACGATCCCCG
TCCGTCCGGAATGACACTCC

Downstream 100 bases:

>100_bases
TCTATGCGGCCGAAGATGGTGATCAGGTGCGTCTCGTGCGTCATTGCGGCCGTTCTGCCAGCTTTCGGAACGAGCGCTTC
AACGCATTGACGCTGGCCAA

Product: putative acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 569; Mature: 568

Protein sequence:

>569_residues
MTRANVPPLDCSSLRAQLAALPGLARLRDLSAGFAEAGDETIAAILESASAFAADRLEALNAQSNSAAPRLVDGAVVTSD
LHGRVWREYAESGWIALDLPEQLGGQGLPLVVAVAVQEVFDRHCAAFGMLPVPVRSAVRLIEAWTTDDMIRSEWLPKLIA
GEWGATICISEVGAGSDVSRIRTKAVPRGDGRWSITGEKQWISFGGHDLTNRIVHCLLARTEGAKGLSLFLVPDRIDGAA
NGVVVRKLEHKLGLHLSPTCAMGFEDAIGHLLGEEGRGLAQMFVMITNMRMAVGAMGLGIASAAADVALAYARQRLQGGA
GPQPLPIIVHADVQRTLLSMQADVECARALIYAAAVEADLARVETNDDARRDSAALAQWLLPIVKTLGGELAFATADSAI
QVLGGAGYTTDWPVEQLLRDSRVLPIFEGTTGMQGLDLLHRRLWKDGGEGLRAFLSRARADIAPLAERDVAAATEIIDLL
ETTAGQLARMRDTPRDGEAGATGFLHLAIDAALTWSAARLGALRNDTPAGARLRALGSFQLGELVGRARHHAADALRGAA
ALEGIATLL

Sequences:

>Translated_569_residues
MTRANVPPLDCSSLRAQLAALPGLARLRDLSAGFAEAGDETIAAILESASAFAADRLEALNAQSNSAAPRLVDGAVVTSD
LHGRVWREYAESGWIALDLPEQLGGQGLPLVVAVAVQEVFDRHCAAFGMLPVPVRSAVRLIEAWTTDDMIRSEWLPKLIA
GEWGATICISEVGAGSDVSRIRTKAVPRGDGRWSITGEKQWISFGGHDLTNRIVHCLLARTEGAKGLSLFLVPDRIDGAA
NGVVVRKLEHKLGLHLSPTCAMGFEDAIGHLLGEEGRGLAQMFVMITNMRMAVGAMGLGIASAAADVALAYARQRLQGGA
GPQPLPIIVHADVQRTLLSMQADVECARALIYAAAVEADLARVETNDDARRDSAALAQWLLPIVKTLGGELAFATADSAI
QVLGGAGYTTDWPVEQLLRDSRVLPIFEGTTGMQGLDLLHRRLWKDGGEGLRAFLSRARADIAPLAERDVAAATEIIDLL
ETTAGQLARMRDTPRDGEAGATGFLHLAIDAALTWSAARLGALRNDTPAGARLRALGSFQLGELVGRARHHAADALRGAA
ALEGIATLL
>Mature_568_residues
TRANVPPLDCSSLRAQLAALPGLARLRDLSAGFAEAGDETIAAILESASAFAADRLEALNAQSNSAAPRLVDGAVVTSDL
HGRVWREYAESGWIALDLPEQLGGQGLPLVVAVAVQEVFDRHCAAFGMLPVPVRSAVRLIEAWTTDDMIRSEWLPKLIAG
EWGATICISEVGAGSDVSRIRTKAVPRGDGRWSITGEKQWISFGGHDLTNRIVHCLLARTEGAKGLSLFLVPDRIDGAAN
GVVVRKLEHKLGLHLSPTCAMGFEDAIGHLLGEEGRGLAQMFVMITNMRMAVGAMGLGIASAAADVALAYARQRLQGGAG
PQPLPIIVHADVQRTLLSMQADVECARALIYAAAVEADLARVETNDDARRDSAALAQWLLPIVKTLGGELAFATADSAIQ
VLGGAGYTTDWPVEQLLRDSRVLPIFEGTTGMQGLDLLHRRLWKDGGEGLRAFLSRARADIAPLAERDVAAATEIIDLLE
TTAGQLARMRDTPRDGEAGATGFLHLAIDAALTWSAARLGALRNDTPAGARLRALGSFQLGELVGRARHHAADALRGAAA
LEGIATLL

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=350, Percent_Identity=32.8571428571429, Blast_Score=136, Evalue=6e-32,
Organism=Homo sapiens, GI4557231, Length=429, Percent_Identity=27.039627039627, Blast_Score=123, Evalue=6e-28,
Organism=Homo sapiens, GI187960098, Length=429, Percent_Identity=27.039627039627, Blast_Score=123, Evalue=6e-28,
Organism=Homo sapiens, GI4501859, Length=363, Percent_Identity=27.8236914600551, Blast_Score=122, Evalue=6e-28,
Organism=Homo sapiens, GI21361497, Length=367, Percent_Identity=27.7929155313352, Blast_Score=117, Evalue=3e-26,
Organism=Homo sapiens, GI7656849, Length=452, Percent_Identity=25.4424778761062, Blast_Score=111, Evalue=2e-24,
Organism=Homo sapiens, GI226958414, Length=372, Percent_Identity=26.6129032258064, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI226958412, Length=357, Percent_Identity=26.890756302521, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI4501857, Length=354, Percent_Identity=27.1186440677966, Blast_Score=105, Evalue=2e-22,
Organism=Homo sapiens, GI4557235, Length=358, Percent_Identity=29.0502793296089, Blast_Score=103, Evalue=6e-22,
Organism=Homo sapiens, GI76496475, Length=358, Percent_Identity=29.0502793296089, Blast_Score=103, Evalue=6e-22,
Organism=Escherichia coli, GI87082384, Length=393, Percent_Identity=29.0076335877863, Blast_Score=98, Evalue=1e-21,
Organism=Escherichia coli, GI87081958, Length=361, Percent_Identity=27.4238227146814, Blast_Score=90, Evalue=4e-19,
Organism=Escherichia coli, GI1786223, Length=365, Percent_Identity=27.9452054794521, Blast_Score=88, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17508101, Length=361, Percent_Identity=30.4709141274238, Blast_Score=141, Evalue=9e-34,
Organism=Caenorhabditis elegans, GI17534899, Length=368, Percent_Identity=29.8913043478261, Blast_Score=136, Evalue=3e-32,
Organism=Caenorhabditis elegans, GI17506239, Length=348, Percent_Identity=29.0229885057471, Blast_Score=134, Evalue=9e-32,
Organism=Caenorhabditis elegans, GI17570075, Length=368, Percent_Identity=27.445652173913, Blast_Score=132, Evalue=7e-31,
Organism=Caenorhabditis elegans, GI17569725, Length=362, Percent_Identity=28.1767955801105, Blast_Score=122, Evalue=6e-28,
Organism=Caenorhabditis elegans, GI17538396, Length=367, Percent_Identity=27.7929155313352, Blast_Score=121, Evalue=9e-28,
Organism=Caenorhabditis elegans, GI17533517, Length=431, Percent_Identity=26.2180974477958, Blast_Score=115, Evalue=9e-26,
Organism=Caenorhabditis elegans, GI71990804, Length=282, Percent_Identity=30.1418439716312, Blast_Score=105, Evalue=6e-23,
Organism=Caenorhabditis elegans, GI71985184, Length=359, Percent_Identity=26.4623955431755, Blast_Score=105, Evalue=9e-23,
Organism=Caenorhabditis elegans, GI86563383, Length=285, Percent_Identity=30.1754385964912, Blast_Score=101, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI86563381, Length=285, Percent_Identity=30.1754385964912, Blast_Score=101, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17551932, Length=368, Percent_Identity=29.6195652173913, Blast_Score=99, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI17505929, Length=354, Percent_Identity=29.9435028248588, Blast_Score=98, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI32563615, Length=229, Percent_Identity=30.1310043668122, Blast_Score=94, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI71985192, Length=310, Percent_Identity=24.1935483870968, Blast_Score=79, Evalue=8e-15,
Organism=Drosophila melanogaster, GI21356377, Length=354, Percent_Identity=30.5084745762712, Blast_Score=137, Evalue=3e-32,
Organism=Drosophila melanogaster, GI24666513, Length=364, Percent_Identity=27.7472527472527, Blast_Score=119, Evalue=4e-27,
Organism=Drosophila melanogaster, GI24660351, Length=304, Percent_Identity=31.5789473684211, Blast_Score=119, Evalue=5e-27,
Organism=Drosophila melanogaster, GI24646207, Length=352, Percent_Identity=29.5454545454545, Blast_Score=113, Evalue=4e-25,
Organism=Drosophila melanogaster, GI281363737, Length=361, Percent_Identity=29.0858725761773, Blast_Score=110, Evalue=3e-24,
Organism=Drosophila melanogaster, GI21355753, Length=359, Percent_Identity=28.9693593314763, Blast_Score=107, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 60241; Mature: 60109

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRANVPPLDCSSLRAQLAALPGLARLRDLSAGFAEAGDETIAAILESASAFAADRLEAL
CCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHH
NAQSNSAAPRLVDGAVVTSDLHGRVWREYAESGWIALDLPEQLGGQGLPLVVAVAVQEVF
CCCCCCCCCCCCCCCEEECHHHHHHHHHHHHCCCEEEECHHHHCCCCCHHHHHHHHHHHH
DRHCAAFGMLPVPVRSAVRLIEAWTTDDMIRSEWLPKLIAGEWGATICISEVGAGSDVSR
HHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHH
IRTKAVPRGDGRWSITGEKQWISFGGHDLTNRIVHCLLARTEGAKGLSLFLVPDRIDGAA
HHHHCCCCCCCCEEECCCCCEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC
NGVVVRKLEHKLGLHLSPTCAMGFEDAIGHLLGEEGRGLAQMFVMITNMRMAVGAMGLGI
CCHHHEEHHHHHCCCCCCHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ASAAADVALAYARQRLQGGAGPQPLPIIVHADVQRTLLSMQADVECARALIYAAAVEADL
HHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARVETNDDARRDSAALAQWLLPIVKTLGGELAFATADSAIQVLGGAGYTTDWPVEQLLRD
HHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCCCCCCHHHHHHC
SRVLPIFEGTTGMQGLDLLHRRLWKDGGEGLRAFLSRARADIAPLAERDVAAATEIIDLL
CCCEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETTAGQLARMRDTPRDGEAGATGFLHLAIDAALTWSAARLGALRNDTPAGARLRALGSFQ
HHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCH
LGELVGRARHHAADALRGAAALEGIATLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
TRANVPPLDCSSLRAQLAALPGLARLRDLSAGFAEAGDETIAAILESASAFAADRLEAL
CCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHH
NAQSNSAAPRLVDGAVVTSDLHGRVWREYAESGWIALDLPEQLGGQGLPLVVAVAVQEVF
CCCCCCCCCCCCCCCEEECHHHHHHHHHHHHCCCEEEECHHHHCCCCCHHHHHHHHHHHH
DRHCAAFGMLPVPVRSAVRLIEAWTTDDMIRSEWLPKLIAGEWGATICISEVGAGSDVSR
HHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHH
IRTKAVPRGDGRWSITGEKQWISFGGHDLTNRIVHCLLARTEGAKGLSLFLVPDRIDGAA
HHHHCCCCCCCCEEECCCCCEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC
NGVVVRKLEHKLGLHLSPTCAMGFEDAIGHLLGEEGRGLAQMFVMITNMRMAVGAMGLGI
CCHHHEEHHHHHCCCCCCHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ASAAADVALAYARQRLQGGAGPQPLPIIVHADVQRTLLSMQADVECARALIYAAAVEADL
HHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARVETNDDARRDSAALAQWLLPIVKTLGGELAFATADSAIQVLGGAGYTTDWPVEQLLRD
HHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCCCCCCHHHHHHC
SRVLPIFEGTTGMQGLDLLHRRLWKDGGEGLRAFLSRARADIAPLAERDVAAATEIIDLL
CCCEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETTAGQLARMRDTPRDGEAGATGFLHLAIDAALTWSAARLGALRNDTPAGARLRALGSFQ
HHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCH
LGELVGRARHHAADALRGAAALEGIATLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]