Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is catE [H]
Identifier: 146340419
GI number: 146340419
Start: 3635724
End: 3636695
Strand: Direct
Name: catE [H]
Synonym: BRADO3455
Alternate gene names: 146340419
Gene position: 3635724-3636695 (Clockwise)
Preceding gene: 146340416
Following gene: 146340423
Centisome position: 48.76
GC content: 66.15
Gene sequence:
>972_bases ATGACTGCAGATCCAACCCGCCGCGCGCTGCTGAAGCTGGCTGGCGCTTCTTCCATGATGATGGCTGCCGTGGCGGCAGT GCGCGCCGAGGGCGGTGGCGAGAGCACCGCTGCCGGCCCGACATTCGCGAGCTGGACCCCGATTCGGATCGGCATGATGA CATTGCGCGTCAACGATCCCGACAAGGTCTCGGCCTTCTACCGCGATGTGATCGGTCTGTCGGTGCTGCAGCGGACCGAG ACCATCGTTCGTCTCGGGGCGGGCGGCGTGCCGCTGGTCGAGCTGGAGGCGCGGCCGGATGCGAGCCGTGAATCGCCGCG CGCCGCCGGACTATTCCATACCGCGTTCCTGATGCCGACCCGCAAGGATCTGGCTCGTTGGCTGGTGCACGTTGCCCGCA ACCGTACGCCGCTGACCGGCTTCGCCGACCACAATGTCAGCGAGGCGGTCTATCTCGATGATCCCGAAGGCAATGGCGTC GAAGTCTATGCCGACCGCGCGCCCGAGCTCTGGCAGTGGCGCGATGGCTCCGTCAAGATGGGCACTGAGCAGCTCGATGT CGACGATCTCGTCGCGCTGACCGATACGCGCAGCAGCAACTACGCTGCCGCGCCCGACGGCCTGCGCATTGGTCATGTTC ATCTCAAGGTGGGAGACGTCGGCCAGGCGAGCGGCTTCTATGCGGGGCTGATCGGACTCAATCCGACGCGGATGATTGAT CGGGCCGCCTTCCTGTCCTCCGGCCGCTATCATCATCACATCGGCGCCAACAGCTGGCGCAGCGCTGGAGCCGGCCGCCG TGATGAGAGCACCACCGGTCTGTCGTGGTTTTCCTTCGAGGTGAAAAGCGACGACGGCCTCGCGCGGCACGAGGAGCGCC TGTGCCAGGCGGGGGCGGCGCTGACTGTGCTCTCAAATGGGCTGGAGACCGCCGATCCCTGGGGCACGAAAGTCCGCTTG ATCCGCGTGTGA
Upstream 100 bases:
>100_bases CGATCTCGTTCTTCACACGCACGTGAGGCATGTATCCGGTGGCAGACTTGCGCGACCCCAAGCCAATCCGTAGGACAACG GGGACTGTCAGGGGGCCTTC
Downstream 100 bases:
>100_bases GCTCATCGCGCCGACGTACAGGCCGACGTTCGGCGCGACTCAGGCCTCGTTGAGGCCCGCGCCGCGATCGGTCAGGACCT TCTGGCCCTTTGCTGTCAGC
Product: putative glyoxalase/Bleomycin resistance protein/dihydroxybiphenyl dioxygenase superfamily protein
Products: NA
Alternate protein names: Catechol-induced ring cleavage extradiol dioxygenase [H]
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MTADPTRRALLKLAGASSMMMAAVAAVRAEGGGESTAAGPTFASWTPIRIGMMTLRVNDPDKVSAFYRDVIGLSVLQRTE TIVRLGAGGVPLVELEARPDASRESPRAAGLFHTAFLMPTRKDLARWLVHVARNRTPLTGFADHNVSEAVYLDDPEGNGV EVYADRAPELWQWRDGSVKMGTEQLDVDDLVALTDTRSSNYAAAPDGLRIGHVHLKVGDVGQASGFYAGLIGLNPTRMID RAAFLSSGRYHHHIGANSWRSAGAGRRDESTTGLSWFSFEVKSDDGLARHEERLCQAGAALTVLSNGLETADPWGTKVRL IRV
Sequences:
>Translated_323_residues MTADPTRRALLKLAGASSMMMAAVAAVRAEGGGESTAAGPTFASWTPIRIGMMTLRVNDPDKVSAFYRDVIGLSVLQRTE TIVRLGAGGVPLVELEARPDASRESPRAAGLFHTAFLMPTRKDLARWLVHVARNRTPLTGFADHNVSEAVYLDDPEGNGV EVYADRAPELWQWRDGSVKMGTEQLDVDDLVALTDTRSSNYAAAPDGLRIGHVHLKVGDVGQASGFYAGLIGLNPTRMID RAAFLSSGRYHHHIGANSWRSAGAGRRDESTTGLSWFSFEVKSDDGLARHEERLCQAGAALTVLSNGLETADPWGTKVRL IRV >Mature_322_residues TADPTRRALLKLAGASSMMMAAVAAVRAEGGGESTAAGPTFASWTPIRIGMMTLRVNDPDKVSAFYRDVIGLSVLQRTET IVRLGAGGVPLVELEARPDASRESPRAAGLFHTAFLMPTRKDLARWLVHVARNRTPLTGFADHNVSEAVYLDDPEGNGVE VYADRAPELWQWRDGSVKMGTEQLDVDDLVALTDTRSSNYAAAPDGLRIGHVHLKVGDVGQASGFYAGLIGLNPTRMIDR AAFLSSGRYHHHIGANSWRSAGAGRRDESTTGLSWFSFEVKSDDGLARHEERLCQAGAALTVLSNGLETADPWGTKVRLI RV
Specific function: Involved in the meta cleavage of catechol to 2- hydroxymuconic semialdehyde. Essential for growth and viability in the presence of catechol and probably involved in the detoxification of catechol [H]
COG id: COG2514
COG function: function code R; Predicted ring-cleavage extradiol dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the extradiol ring-cleavage dioxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004360 - InterPro: IPR000486 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: =1.13.11.2 [H]
Molecular weight: Translated: 34865; Mature: 34734
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTADPTRRALLKLAGASSMMMAAVAAVRAEGGGESTAAGPTFASWTPIRIGMMTLRVNDP CCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCC DKVSAFYRDVIGLSVLQRTETIVRLGAGGVPLVELEARPDASRESPRAAGLFHTAFLMPT HHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEECCCCCCCCCCCHHHHEEHHEECCC RKDLARWLVHVARNRTPLTGFADHNVSEAVYLDDPEGNGVEVYADRAPELWQWRDGSVKM HHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCEEECCCCEEE GTEQLDVDDLVALTDTRSSNYAAAPDGLRIGHVHLKVGDVGQASGFYAGLIGLNPTRMID CCCCCCHHHEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEECCCHHHHHH RAAFLSSGRYHHHIGANSWRSAGAGRRDESTTGLSWFSFEVKSDDGLARHEERLCQAGAA HHHHHHCCCEEEECCCCCHHHCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCE LTVLSNGLETADPWGTKVRLIRV EEEHHCCCCCCCCCCCEEEEEEC >Mature Secondary Structure TADPTRRALLKLAGASSMMMAAVAAVRAEGGGESTAAGPTFASWTPIRIGMMTLRVNDP CCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCC DKVSAFYRDVIGLSVLQRTETIVRLGAGGVPLVELEARPDASRESPRAAGLFHTAFLMPT HHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEECCCCCCCCCCCHHHHEEHHEECCC RKDLARWLVHVARNRTPLTGFADHNVSEAVYLDDPEGNGVEVYADRAPELWQWRDGSVKM HHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCEEECCCCEEE GTEQLDVDDLVALTDTRSSNYAAAPDGLRIGHVHLKVGDVGQASGFYAGLIGLNPTRMID CCCCCCHHHEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEECCCHHHHHH RAAFLSSGRYHHHIGANSWRSAGAGRRDESTTGLSWFSFEVKSDDGLARHEERLCQAGAA HHHHHHCCCEEEECCCCCHHHCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCE LTVLSNGLETADPWGTKVRLIRV EEEHHCCCCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8704981; 9384377 [H]