| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146340409
Identifier: 146340409
GI number: 146340409
Start: 3627970
End: 3628521
Strand: Direct
Name: 146340409
Synonym: BRADO3442
Alternate gene names: NA
Gene position: 3627970-3628521 (Clockwise)
Preceding gene: 146340403
Following gene: 146340411
Centisome position: 48.65
GC content: 66.12
Gene sequence:
>552_bases ATGTCTCTCCAACGTCTGTTTTCGTTCGTCGGCGGACCGGTCGGAGCCTGGGCGGTCCGTGAGATCCGGCCAGTCAGGGG GGCGACGCTGGCCGGCGTCGCGCGGTTGGAGATCGCTCCGGGCGATGTCTCGCCTCAGGACGCGTGCTGGTCGCTTCGCG GGGTCACCAGCAACGTCAGATACTCGACGCGGTCCGAGCAGAGCACGCTCGCCTCGGTCCAGGCTGGGCTCGGGCGGTCA GAGGCGACCTGTGCCGCGCTGATCCCGATCGCGAAGACGGCCGCATGGTGGGATCTGCCACAGGATGAGCGGCGGGCTAT TTTCGAGGAGCATTCGCGTCACACCAGTATCGGCTTGAAGTATCTGCCGCCGGTCGCGCGACGGCTGCATCATTGTCGCG ACATCGGCACGGCGGAGCCGTTTGACTTCCTGACCTGGTTCGAGTTCGCGCCAGAGCATGAGGCCGCTTTTGATGATCTC CTGGCCGAGCTGCGCGCGACGAAGGAGTGGGATTTCGTCGCGCGGGAGGTCGAGGTCAGGCTCACGCGCTGA
Upstream 100 bases:
>100_bases GAGCAGGAGCTGCCCAGGTTTTCCGATTGCAAATTTCATCGATTGAAGCACCATCGAGACGTCATGAGGATGCAGGGCTC CTCGACGTGGTGCGGATCTG
Downstream 100 bases:
>100_bases GGCGCGGGCGCCGGAAGGCTGGCTCTCATTGGCTCTTGTTGAGCGGGCCGTTGCCGCGCGCGCTGTCGCTTGCGGTATCG TTACGTGGCGCGGCGACTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MSLQRLFSFVGGPVGAWAVREIRPVRGATLAGVARLEIAPGDVSPQDACWSLRGVTSNVRYSTRSEQSTLASVQAGLGRS EATCAALIPIAKTAAWWDLPQDERRAIFEEHSRHTSIGLKYLPPVARRLHHCRDIGTAEPFDFLTWFEFAPEHEAAFDDL LAELRATKEWDFVAREVEVRLTR
Sequences:
>Translated_183_residues MSLQRLFSFVGGPVGAWAVREIRPVRGATLAGVARLEIAPGDVSPQDACWSLRGVTSNVRYSTRSEQSTLASVQAGLGRS EATCAALIPIAKTAAWWDLPQDERRAIFEEHSRHTSIGLKYLPPVARRLHHCRDIGTAEPFDFLTWFEFAPEHEAAFDDL LAELRATKEWDFVAREVEVRLTR >Mature_182_residues SLQRLFSFVGGPVGAWAVREIRPVRGATLAGVARLEIAPGDVSPQDACWSLRGVTSNVRYSTRSEQSTLASVQAGLGRSE ATCAALIPIAKTAAWWDLPQDERRAIFEEHSRHTSIGLKYLPPVARRLHHCRDIGTAEPFDFLTWFEFAPEHEAAFDDLL AELRATKEWDFVAREVEVRLTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20458; Mature: 20327
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLQRLFSFVGGPVGAWAVREIRPVRGATLAGVARLEIAPGDVSPQDACWSLRGVTSNVR CCHHHHHHHHCCCCCHHHHHHHHCCCCCHHHCEEEEEECCCCCCCHHHHHHHHCCCCCCE YSTRSEQSTLASVQAGLGRSEATCAALIPIAKTAAWWDLPQDERRAIFEEHSRHTSIGLK ECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHCCCH YLPPVARRLHHCRDIGTAEPFDFLTWFEFAPEHEAAFDDLLAELRATKEWDFVAREVEVR HCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHEEE LTR ECC >Mature Secondary Structure SLQRLFSFVGGPVGAWAVREIRPVRGATLAGVARLEIAPGDVSPQDACWSLRGVTSNVR CHHHHHHHHCCCCCHHHHHHHHCCCCCHHHCEEEEEECCCCCCCHHHHHHHHCCCCCCE YSTRSEQSTLASVQAGLGRSEATCAALIPIAKTAAWWDLPQDERRAIFEEHSRHTSIGLK ECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHCCCH YLPPVARRLHHCRDIGTAEPFDFLTWFEFAPEHEAAFDDLLAELRATKEWDFVAREVEVR HCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHEEE LTR ECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA