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The map label for this gene is dcrA [H]

Identifier: 146340403

GI number: 146340403

Start: 3621761

End: 3623836

Strand: Direct

Name: dcrA [H]

Synonym: BRADO3436

Alternate gene names: 146340403

Gene position: 3621761-3623836 (Clockwise)

Preceding gene: 146340396

Following gene: 146340409

Centisome position: 48.57

GC content: 67.39

Gene sequence:

>2076_bases
ATGCGAGTCGGTCAGCTTTTTGCAGTCTCGATGCTCTCAGTCACGGCCCTGGCGTGCGTGCTCGGGGGTGAAGTCCTGGT
GACGCACTACCGCGCCTACGAGAGCAGGACGGAAGCGATCAAATCAGTCGACGCGTTCGGGGCTGTGCTTCTGGCCGGCC
AAGCCGTTGCCGGACTACGTGCGCCGTTCGTGACGCCAATGTTTCAGGATACACCGGCCACGCCAGCTCAGCAGGAGGCT
CTCGACAAGGCGGCGCAGCAGGCAGAGGCCGCCTTTGCCAAGGCGAAGGGGGCGGTCGAGACGCTCTCCGACGGTGAGTC
CATCCTCAGCGGTCTGAATGCCGCGAAGACGAAGCTCACCGATGTGCGCGCGATGGTCGACCGCGCCGTGAAGCTGCCGT
TGAGCGCGCGGGACCCGTCGACCATGAAGGGCTTCCTGCCCGGGCTCACGGATGTGCTCAAGACGATCGAGCCGCTGCTG
AACCGCCTCGAGAACCGTGTTGCGAGCGCCGACGCCTCTCTGACGCCCTTGCTGTCGATCGCACGCATCACTCAGGATCT
GCGCATCACTGCAGGCGGTCGCGCCGCCATGCTGGCCCCGGCGCTCGGCGCGAAGCGCGCGCTGAGCGTCGCGGAACAGT
CCGGTATCGATCGCGCACAGGGGCGGATCGAGGTCGACCGCGAGCGGATCGAGTCGAGCATCGACCAGCTGGGCAGCCCT
CCCAAGGTGGCCCAGGCGATGGCCGAGGCTGTGGATGCCTATTTCAACAACGCCGCCGGGCTGATCGAAAAGGAGATCGC
GGCGTCCCGCACCAACGCCAGCTATTCGTTGACGCCGGAGCAACTGGGCGGGACCGTCGTGCCGCCGATCGGGAAGTTCT
TGGCAGTTCGCGACAATGCCATCGCCGAGGCAAAGGGCCGCGCGGAAGCTGCGCGCGACGACGCGTTCCTGATGCTGGGG
ATCGGAAGCGGCGCCGTGATCGCGCTGCTCGGCATGCTCGGTGTCGTCACCTTCATGCTTCGCCGTCGCGTCATCGCTCC
GCTGGCGGCGCTGACCGGGGTCGTCGGTGAGCTCGCCGCCGGCCGCGACGAGGTCAGCATTCCCGCGAGTGACCGGCAGG
ACGAGATCGGCACACTGGCCGGCTCCCTGCAGGTGTTCAAGGATGCGCTGGTGGCGAAGAAGGCCGCCGACCGTGCGGCT
GCGGCCGAGGCGGAAGCCAAGATCCAGCGCGGCCAGCGCGTCGACACGATCACCCGCGAGTTCGAAACCATCATCAGCGA
AATCGTCGACGTCGTGTCGGCGGCATCGACCGCGCTGGAGAGCTCGGCGGGAACGCTCACCACGACCGCTGAGCAGTCGG
AGCGGCTCGCGATTACCGTCGCTTCCGCATCGGAAGAGGCCTCGACGAACGTGCAGTCGGTGGCGTCGGCGACCGAGGAG
ATGTCGTCGTCGGTAACCGAGATCAGCCGCCAGGTGCAGGACTCCGCGAGAGTTGCCAACGCGGCGGTTCAGCAGGCGCA
GCGAACCAATGATCGCGTCGGCGAACTGGCCAAGGCCGCTGGCCGGATCGGCGATGTCGTCGAGCTCATCAATTCGATTG
CAGGTCAGACCAATTTGCTGGCGCTCAACGCCACCATCGAGGCCGCGCGCGCGGGAGAGGCCGGGCGCGGCTTCGCCGTG
GTCGCGTCGGAGGTGAAGGCGCTGGCCGAGCAGACCGCCAAGGCGACCGACGAGATCAGCCAGCAGATCAACGGCATCCA
GGCGGCGACGCAGGAGTCGGTCAATGCCATCCGGGAGATTGGCGAGACGATCGAGCGGATGTCGGAGATCGCCTCGACGG
TCGCCTCCGCCGTGGAAGAGCAGGGCGCGGCGACGCAGGAGATCTCCCGCAGCATTCAGCAGGCTGCGCATGGCACGCAG
CAGGTGTCGTCGAACATCACCGACGTGCAGCGCGGCGCCAGCGCGACCGGCCAGGCCTCAGCGCAAGTGCTGACCGCAGC
GAAGTCGCTGGCCGGCGAAAGCAGTCGCCTGAAGCGCGAGGTGTCGCGCTTCCTCGGCTCCGTCCGCGCCGCATAG

Upstream 100 bases:

>100_bases
TGCGGGTTGCGGCGATCTGCAGCTCGACTGGCGCGCGAAATTAAGACCCTCTTAGGCTCGGCTGCGTAATTTGACCCGAT
CTTTCCAAGGGAAACGTTCC

Downstream 100 bases:

>100_bases
GGGCTGAGCCGACGCGATATCTTCAGAACGCGAGAGCGCCGGACTTTCGAGGTCCGGCGCTCTCGTCACGTCAAAGACGG
GTACTGGCTCGTGCCTATTT

Product: putative methyl-accepting chemotaxis receptor/sensory transducer protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 691; Mature: 691

Protein sequence:

>691_residues
MRVGQLFAVSMLSVTALACVLGGEVLVTHYRAYESRTEAIKSVDAFGAVLLAGQAVAGLRAPFVTPMFQDTPATPAQQEA
LDKAAQQAEAAFAKAKGAVETLSDGESILSGLNAAKTKLTDVRAMVDRAVKLPLSARDPSTMKGFLPGLTDVLKTIEPLL
NRLENRVASADASLTPLLSIARITQDLRITAGGRAAMLAPALGAKRALSVAEQSGIDRAQGRIEVDRERIESSIDQLGSP
PKVAQAMAEAVDAYFNNAAGLIEKEIAASRTNASYSLTPEQLGGTVVPPIGKFLAVRDNAIAEAKGRAEAARDDAFLMLG
IGSGAVIALLGMLGVVTFMLRRRVIAPLAALTGVVGELAAGRDEVSIPASDRQDEIGTLAGSLQVFKDALVAKKAADRAA
AAEAEAKIQRGQRVDTITREFETIISEIVDVVSAASTALESSAGTLTTTAEQSERLAITVASASEEASTNVQSVASATEE
MSSSVTEISRQVQDSARVANAAVQQAQRTNDRVGELAKAAGRIGDVVELINSIAGQTNLLALNATIEAARAGEAGRGFAV
VASEVKALAEQTAKATDEISQQINGIQAATQESVNAIREIGETIERMSEIASTVASAVEEQGAATQEISRSIQQAAHGTQ
QVSSNITDVQRGASATGQASAQVLTAAKSLAGESSRLKREVSRFLGSVRAA

Sequences:

>Translated_691_residues
MRVGQLFAVSMLSVTALACVLGGEVLVTHYRAYESRTEAIKSVDAFGAVLLAGQAVAGLRAPFVTPMFQDTPATPAQQEA
LDKAAQQAEAAFAKAKGAVETLSDGESILSGLNAAKTKLTDVRAMVDRAVKLPLSARDPSTMKGFLPGLTDVLKTIEPLL
NRLENRVASADASLTPLLSIARITQDLRITAGGRAAMLAPALGAKRALSVAEQSGIDRAQGRIEVDRERIESSIDQLGSP
PKVAQAMAEAVDAYFNNAAGLIEKEIAASRTNASYSLTPEQLGGTVVPPIGKFLAVRDNAIAEAKGRAEAARDDAFLMLG
IGSGAVIALLGMLGVVTFMLRRRVIAPLAALTGVVGELAAGRDEVSIPASDRQDEIGTLAGSLQVFKDALVAKKAADRAA
AAEAEAKIQRGQRVDTITREFETIISEIVDVVSAASTALESSAGTLTTTAEQSERLAITVASASEEASTNVQSVASATEE
MSSSVTEISRQVQDSARVANAAVQQAQRTNDRVGELAKAAGRIGDVVELINSIAGQTNLLALNATIEAARAGEAGRGFAV
VASEVKALAEQTAKATDEISQQINGIQAATQESVNAIREIGETIERMSEIASTVASAVEEQGAATQEISRSIQQAAHGTQ
QVSSNITDVQRGASATGQASAQVLTAAKSLAGESSRLKREVSRFLGSVRAA
>Mature_691_residues
MRVGQLFAVSMLSVTALACVLGGEVLVTHYRAYESRTEAIKSVDAFGAVLLAGQAVAGLRAPFVTPMFQDTPATPAQQEA
LDKAAQQAEAAFAKAKGAVETLSDGESILSGLNAAKTKLTDVRAMVDRAVKLPLSARDPSTMKGFLPGLTDVLKTIEPLL
NRLENRVASADASLTPLLSIARITQDLRITAGGRAAMLAPALGAKRALSVAEQSGIDRAQGRIEVDRERIESSIDQLGSP
PKVAQAMAEAVDAYFNNAAGLIEKEIAASRTNASYSLTPEQLGGTVVPPIGKFLAVRDNAIAEAKGRAEAARDDAFLMLG
IGSGAVIALLGMLGVVTFMLRRRVIAPLAALTGVVGELAAGRDEVSIPASDRQDEIGTLAGSLQVFKDALVAKKAADRAA
AAEAEAKIQRGQRVDTITREFETIISEIVDVVSAASTALESSAGTLTTTAEQSERLAITVASASEEASTNVQSVASATEE
MSSSVTEISRQVQDSARVANAAVQQAQRTNDRVGELAKAAGRIGDVVELINSIAGQTNLLALNATIEAARAGEAGRGFAV
VASEVKALAEQTAKATDEISQQINGIQAATQESVNAIREIGETIERMSEIASTVASAVEEQGAATQEISRSIQQAAHGTQ
QVSSNITDVQRGASATGQASAQVLTAAKSLAGESSRLKREVSRFLGSVRAA

Specific function: Mediates Taxis Toward Dipeptides VIa An Interaction With The Periplasmic Dipeptide-Binding Protein. Chemotactic-Signal Transducers Respond To Changes In The Concentration Of Attractants And Repellents In The Environment, Transduce A Signal From The Outsid

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=332, Percent_Identity=30.421686746988, Blast_Score=105, Evalue=1e-23,
Organism=Escherichia coli, GI1787690, Length=402, Percent_Identity=31.8407960199005, Blast_Score=102, Evalue=8e-23,
Organism=Escherichia coli, GI2367378, Length=324, Percent_Identity=31.4814814814815, Blast_Score=96, Evalue=6e-21,
Organism=Escherichia coli, GI1788195, Length=327, Percent_Identity=29.0519877675841, Blast_Score=95, Evalue=2e-20,
Organism=Escherichia coli, GI1789453, Length=196, Percent_Identity=32.1428571428571, Blast_Score=86, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF00989 PAS [H]

EC number: NA

Molecular weight: Translated: 71677; Mature: 71677

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2 ; PS50192 T_SNARE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVGQLFAVSMLSVTALACVLGGEVLVTHYRAYESRTEAIKSVDAFGAVLLAGQAVAGLR
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
APFVTPMFQDTPATPAQQEALDKAAQQAEAAFAKAKGAVETLSDGESILSGLNAAKTKLT
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
DVRAMVDRAVKLPLSARDPSTMKGFLPGLTDVLKTIEPLLNRLENRVASADASLTPLLSI
HHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
ARITQDLRITAGGRAAMLAPALGAKRALSVAEQSGIDRAQGRIEVDRERIESSIDQLGSP
HHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHCCCC
PKVAQAMAEAVDAYFNNAAGLIEKEIAASRTNASYSLTPEQLGGTVVPPIGKFLAVRDNA
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHHHHHCCCH
IAEAKGRAEAARDDAFLMLGIGSGAVIALLGMLGVVTFMLRRRVIAPLAALTGVVGELAA
HHHHCCHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GRDEVSIPASDRQDEIGTLAGSLQVFKDALVAKKAADRAAAAEAEAKIQRGQRVDTITRE
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
FETIISEIVDVVSAASTALESSAGTLTTTAEQSERLAITVASASEEASTNVQSVASATEE
HHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH
MSSSVTEISRQVQDSARVANAAVQQAQRTNDRVGELAKAAGRIGDVVELINSIAGQTNLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
ALNATIEAARAGEAGRGFAVVASEVKALAEQTAKATDEISQQINGIQAATQESVNAIREI
EEECHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GETIERMSEIASTVASAVEEQGAATQEISRSIQQAAHGTQQVSSNITDVQRGASATGQAS
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHH
AQVLTAAKSLAGESSRLKREVSRFLGSVRAA
HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRVGQLFAVSMLSVTALACVLGGEVLVTHYRAYESRTEAIKSVDAFGAVLLAGQAVAGLR
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
APFVTPMFQDTPATPAQQEALDKAAQQAEAAFAKAKGAVETLSDGESILSGLNAAKTKLT
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
DVRAMVDRAVKLPLSARDPSTMKGFLPGLTDVLKTIEPLLNRLENRVASADASLTPLLSI
HHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
ARITQDLRITAGGRAAMLAPALGAKRALSVAEQSGIDRAQGRIEVDRERIESSIDQLGSP
HHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHCCCC
PKVAQAMAEAVDAYFNNAAGLIEKEIAASRTNASYSLTPEQLGGTVVPPIGKFLAVRDNA
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHHHHHCCCH
IAEAKGRAEAARDDAFLMLGIGSGAVIALLGMLGVVTFMLRRRVIAPLAALTGVVGELAA
HHHHCCHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GRDEVSIPASDRQDEIGTLAGSLQVFKDALVAKKAADRAAAAEAEAKIQRGQRVDTITRE
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
FETIISEIVDVVSAASTALESSAGTLTTTAEQSERLAITVASASEEASTNVQSVASATEE
HHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH
MSSSVTEISRQVQDSARVANAAVQQAQRTNDRVGELAKAAGRIGDVVELINSIAGQTNLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
ALNATIEAARAGEAGRGFAVVASEVKALAEQTAKATDEISQQINGIQAATQESVNAIREI
EEECHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GETIERMSEIASTVASAVEEQGAATQEISRSIQQAAHGTQQVSSNITDVQRGASATGQAS
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHH
AQVLTAAKSLAGESSRLKREVSRFLGSVRAA
HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1548224 [H]