| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146340219
Identifier: 146340219
GI number: 146340219
Start: 3439733
End: 3441589
Strand: Reverse
Name: 146340219
Synonym: BRADO3238
Alternate gene names: NA
Gene position: 3441589-3439733 (Counterclockwise)
Preceding gene: 146340221
Following gene: 146340217
Centisome position: 46.16
GC content: 66.56
Gene sequence:
>1857_bases ATGCGCCGCCCGCTCGTGCTGCTGTGCGCCGGACTGACCCTCTTGTCGTCCAGTGCCGCATTTGCGCAGAACGCCACGCC CCGTAACCTCATCCTGTTCATTCCCGACGGTCTGCGCGCGGCAAAGGTGACGCCGGAGACCGCGCCGGCCATGGCCGCCG TCCGCGACAAGGGCGTCAATTTCAAGAACTCGCACTCGCTGTTTCCGACTTTCACCATGGCCAACGGCTCGGCCATGGCG ACCGGCCACTATCTCGGCGACACCGGCACGTTCTCGAACACCATCTTCACCGGCTACACCTCGGTGCCGGCCGGCGACAC CGTCGTGCCCTTCATCGAGAACGACGCCGTGCTCGGCGACATCGACGAGCATTTCAACGGCGACTATCTCAACGAGGACA CGATCCTGAAGCTCGCCCGCAAGGCCGGCTATTCCACGGCCGCGATCGGCAAGCTCGGCCCGACCTATCTGTTCGACCAC ACCGGCTGCCCCTGCAAGCCCGGCGCGACATCGTCGATCGTGATCGACGATTCCACCGGCGGCAAGGCCGGCGTGCCGCT GACCGACGAGATCAAAGACGCCATCGGCAAGGCCGGGCTGCCGCTGGCGACGCCGTCGCGCGGCGACAATGGCAAGGCGG GCGATGCCAAGACACCGGGCACCACCTCGGCCAACGTCGCCCAGCAGGCCTATATGGTCGACGTCGCCACCAAGGTGGTG CTGCCGATGTTCAAGGCCCGCAACAAGCCGTTCGTGCTGGTGTTCTGGTCGCGTGACCCCGACGGCAGCCAGCACAATCA GGGCGACAGCCTCAACACCATCACGCCGGGCATCAACGGCCCGACCTCGATGGCCAGCATCAAGAATGCCGACGACAATC TCGCCGCGCTGCGCAAGGCGCTCGATGATCTCGGGCTTGCTTCCTCGACCAACATCATGGTGCAGGCCGACCACGGCTTC TCGACCATCTCCAAGGAGAGCAAGACCTCGCCCTCGGCCAAGGTCAGCTATGACGACACGCCGAAGGATTTCCTGCCGAT GGGCTTCCTGGCGATCGACCTCGCGAAGGCGCTCGACCTGCCGCTGTTCGATCCCAACGACAAGAACGCCGCGGTACCCG ACGGCAAGCATCCCAAGTCCGGCAACGGCGTGCTCGGCAAGGACCCGGCCAAGCCGGACCTCGTCGTCGCCACCAATGGC GGCTCCGACCTGATCTATCTGCCGAACGGCGACAAGAAGCTCGCCCGCCGCACCGTGAAGGCGCTGCTGGCGCAGGATTA TGTCTCCGGCATCTTCGTCGACGACAAGCTCGGCGAGATCCCCGGCACATTGCCGCTGTCGGAGATCAACCTGCAGGGCA AGGCGGTGACGCCGCATCCCGCGATCGTGGTGAACTTCCGCTCCTACGTCGCACCTGGCTGCGACCAGCCGACCAATTGC CAGGTCGAGGTCGCCGACACGGTGCTGCGCCAGGGCCAGGGCATGCACGGCTCGTTCGGCCGCGGCGACACCTACAACTT CATGGCCGCCATCGGTCCCGACTTCAAGGCGGGCTTCGTCGATCCCCTGCCCGTCAGCAACGCCGATGTCGGCGCCACCG CGGCCAAGCTGCTCGACCTCAAGGTCGCGCCGAAGGGCAAACTGGTAGGCCGCGTGATGACCGAGGCGATGCCGAACGGC GCGACGCCGAAGGCCACGACCGACGTCATCAAGTCCGACCCGGCCGCCGGCGGGCTCCGCACCGTGCTGAAGCTGCAGCG CGTCGGCAGCCAGCGCTATTTCGACGTCGCCGGCTTCCCGGGCCGCACGGTGGGCCTGGATGACGAGGCGCCGCAGCAGA AGGCGGCGGCGAAGTAG
Upstream 100 bases:
>100_bases GCAGCCTTCCCCCTTGTAACAAAACCGTCACCTGGCAAAACTAAAGCTCTTGCCTGCGGCGAGACGCCGCGATTCCGCCG ATTGCTTTCAGGAGTTATCA
Downstream 100 bases:
>100_bases TCGGATTACGGCCTTTCAGCGATCAGCGAGTGCCCCGTGCAAGCGGGGCACTCCTTTTTGAACGCGACGCGCTGCCGTCG CCCGGGTGAGCGCAGCGACA
Product: putative signal peptide
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 618; Mature: 618
Protein sequence:
>618_residues MRRPLVLLCAGLTLLSSSAAFAQNATPRNLILFIPDGLRAAKVTPETAPAMAAVRDKGVNFKNSHSLFPTFTMANGSAMA TGHYLGDTGTFSNTIFTGYTSVPAGDTVVPFIENDAVLGDIDEHFNGDYLNEDTILKLARKAGYSTAAIGKLGPTYLFDH TGCPCKPGATSSIVIDDSTGGKAGVPLTDEIKDAIGKAGLPLATPSRGDNGKAGDAKTPGTTSANVAQQAYMVDVATKVV LPMFKARNKPFVLVFWSRDPDGSQHNQGDSLNTITPGINGPTSMASIKNADDNLAALRKALDDLGLASSTNIMVQADHGF STISKESKTSPSAKVSYDDTPKDFLPMGFLAIDLAKALDLPLFDPNDKNAAVPDGKHPKSGNGVLGKDPAKPDLVVATNG GSDLIYLPNGDKKLARRTVKALLAQDYVSGIFVDDKLGEIPGTLPLSEINLQGKAVTPHPAIVVNFRSYVAPGCDQPTNC QVEVADTVLRQGQGMHGSFGRGDTYNFMAAIGPDFKAGFVDPLPVSNADVGATAAKLLDLKVAPKGKLVGRVMTEAMPNG ATPKATTDVIKSDPAAGGLRTVLKLQRVGSQRYFDVAGFPGRTVGLDDEAPQQKAAAK
Sequences:
>Translated_618_residues MRRPLVLLCAGLTLLSSSAAFAQNATPRNLILFIPDGLRAAKVTPETAPAMAAVRDKGVNFKNSHSLFPTFTMANGSAMA TGHYLGDTGTFSNTIFTGYTSVPAGDTVVPFIENDAVLGDIDEHFNGDYLNEDTILKLARKAGYSTAAIGKLGPTYLFDH TGCPCKPGATSSIVIDDSTGGKAGVPLTDEIKDAIGKAGLPLATPSRGDNGKAGDAKTPGTTSANVAQQAYMVDVATKVV LPMFKARNKPFVLVFWSRDPDGSQHNQGDSLNTITPGINGPTSMASIKNADDNLAALRKALDDLGLASSTNIMVQADHGF STISKESKTSPSAKVSYDDTPKDFLPMGFLAIDLAKALDLPLFDPNDKNAAVPDGKHPKSGNGVLGKDPAKPDLVVATNG GSDLIYLPNGDKKLARRTVKALLAQDYVSGIFVDDKLGEIPGTLPLSEINLQGKAVTPHPAIVVNFRSYVAPGCDQPTNC QVEVADTVLRQGQGMHGSFGRGDTYNFMAAIGPDFKAGFVDPLPVSNADVGATAAKLLDLKVAPKGKLVGRVMTEAMPNG ATPKATTDVIKSDPAAGGLRTVLKLQRVGSQRYFDVAGFPGRTVGLDDEAPQQKAAAK >Mature_618_residues MRRPLVLLCAGLTLLSSSAAFAQNATPRNLILFIPDGLRAAKVTPETAPAMAAVRDKGVNFKNSHSLFPTFTMANGSAMA TGHYLGDTGTFSNTIFTGYTSVPAGDTVVPFIENDAVLGDIDEHFNGDYLNEDTILKLARKAGYSTAAIGKLGPTYLFDH TGCPCKPGATSSIVIDDSTGGKAGVPLTDEIKDAIGKAGLPLATPSRGDNGKAGDAKTPGTTSANVAQQAYMVDVATKVV LPMFKARNKPFVLVFWSRDPDGSQHNQGDSLNTITPGINGPTSMASIKNADDNLAALRKALDDLGLASSTNIMVQADHGF STISKESKTSPSAKVSYDDTPKDFLPMGFLAIDLAKALDLPLFDPNDKNAAVPDGKHPKSGNGVLGKDPAKPDLVVATNG GSDLIYLPNGDKKLARRTVKALLAQDYVSGIFVDDKLGEIPGTLPLSEINLQGKAVTPHPAIVVNFRSYVAPGCDQPTNC QVEVADTVLRQGQGMHGSFGRGDTYNFMAAIGPDFKAGFVDPLPVSNADVGATAAKLLDLKVAPKGKLVGRVMTEAMPNG ATPKATTDVIKSDPAAGGLRTVLKLQRVGSQRYFDVAGFPGRTVGLDDEAPQQKAAAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64624; Mature: 64624
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRPLVLLCAGLTLLSSSAAFAQNATPRNLILFIPDGLRAAKVTPETAPAMAAVRDKGVN CCCCEEEEEHHHHHHHCCHHHHCCCCCCEEEEECCCCCCEEECCCCCCHHHHHHHHCCCC FKNSHSLFPTFTMANGSAMATGHYLGDTGTFSNTIFTGYTSVPAGDTVVPFIENDAVLGD CCCCCCCCEEEEECCCCEEEECCEECCCCCCCCEEEECEECCCCCCEEEEEECCCCEEEC IDEHFNGDYLNEDTILKLARKAGYSTAAIGKLGPTYLFDHTGCPCKPGATSSIVIDDSTG HHHHCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCEEECCCCCCCCCCCCCEEEEECCCC GKAGVPLTDEIKDAIGKAGLPLATPSRGDNGKAGDAKTPGTTSANVAQQAYMVDVATKVV CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH LPMFKARNKPFVLVFWSRDPDGSQHNQGDSLNTITPGINGPTSMASIKNADDNLAALRKA HHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEECCCCCCCHHHHHHCCCCHHHHHHHHH LDDLGLASSTNIMVQADHGFSTISKESKTSPSAKVSYDDTPKDFLPMGFLAIDLAKALDL HHHHCCCCCCEEEEEECCCCHHHCHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCC PLFDPNDKNAAVPDGKHPKSGNGVLGKDPAKPDLVVATNGGSDLIYLPNGDKKLARRTVK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCHHHHHHHHH ALLAQDYVSGIFVDDKLGEIPGTLPLSEINLQGKAVTPHPAIVVNFRSYVAPGCDQPTNC HHHHHHHHHCEEEECHHCCCCCCCCHHHCCCCCCEECCCCEEEEEEHHHCCCCCCCCCCC QVEVADTVLRQGQGMHGSFGRGDTYNFMAAIGPDFKAGFVDPLPVSNADVGATAAKLLDL EEEHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHEEE KVAPKGKLVGRVMTEAMPNGATPKATTDVIKSDPAAGGLRTVLKLQRVGSQRYFDVAGFP EECCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEECCCC GRTVGLDDEAPQQKAAAK CCEECCCCCCCHHHHCCC >Mature Secondary Structure MRRPLVLLCAGLTLLSSSAAFAQNATPRNLILFIPDGLRAAKVTPETAPAMAAVRDKGVN CCCCEEEEEHHHHHHHCCHHHHCCCCCCEEEEECCCCCCEEECCCCCCHHHHHHHHCCCC FKNSHSLFPTFTMANGSAMATGHYLGDTGTFSNTIFTGYTSVPAGDTVVPFIENDAVLGD CCCCCCCCEEEEECCCCEEEECCEECCCCCCCCEEEECEECCCCCCEEEEEECCCCEEEC IDEHFNGDYLNEDTILKLARKAGYSTAAIGKLGPTYLFDHTGCPCKPGATSSIVIDDSTG HHHHCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCEEECCCCCCCCCCCCCEEEEECCCC GKAGVPLTDEIKDAIGKAGLPLATPSRGDNGKAGDAKTPGTTSANVAQQAYMVDVATKVV CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH LPMFKARNKPFVLVFWSRDPDGSQHNQGDSLNTITPGINGPTSMASIKNADDNLAALRKA HHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEECCCCCCCHHHHHHCCCCHHHHHHHHH LDDLGLASSTNIMVQADHGFSTISKESKTSPSAKVSYDDTPKDFLPMGFLAIDLAKALDL HHHHCCCCCCEEEEEECCCCHHHCHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCC PLFDPNDKNAAVPDGKHPKSGNGVLGKDPAKPDLVVATNGGSDLIYLPNGDKKLARRTVK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCHHHHHHHHH ALLAQDYVSGIFVDDKLGEIPGTLPLSEINLQGKAVTPHPAIVVNFRSYVAPGCDQPTNC HHHHHHHHHCEEEECHHCCCCCCCCHHHCCCCCCEECCCCEEEEEEHHHCCCCCCCCCCC QVEVADTVLRQGQGMHGSFGRGDTYNFMAAIGPDFKAGFVDPLPVSNADVGATAAKLLDL EEEHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHEEE KVAPKGKLVGRVMTEAMPNGATPKATTDVIKSDPAAGGLRTVLKLQRVGSQRYFDVAGFP EECCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEECCCC GRTVGLDDEAPQQKAAAK CCEECCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA