| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is arsB [H]
Identifier: 146340221
GI number: 146340221
Start: 3442304
End: 3443560
Strand: Reverse
Name: arsB [H]
Synonym: BRADO3240
Alternate gene names: 146340221
Gene position: 3443560-3442304 (Counterclockwise)
Preceding gene: 146340222
Following gene: 146340219
Centisome position: 46.18
GC content: 67.94
Gene sequence:
>1257_bases ATGCTCGCACACCCGACCTGGCTCACCTACGCCATCATCATCACCGCCACCGCCGGCGTCATTATTCGCCCCTTCCGGCT GCCCGAAGCAATCTGGGCGGTGGCCGGCGCGGTCCTGCTCGTCGCGCTCGGTCTGCTGCCTTGGACGGACGCGCTCGCCG GCATCCGCAAGGGCATCGACGTCTATCTGTTCCTGATCGGCATGATGCTGATCGCCGAGCTCGCGCGCCGCGAAGGTCTG TTCGATTATCTGGCCGCCTATGCGGTGGAGCATGCGCGCGGCTCGCCGCAGCTGCTGTTCCTGCTGGTCTATGCGGTCGG CACCCTGGTCACCGTGCTGCTCTCCAACGACGCCACCGCGATCGTGCTGACGCCCGCCGTCTATGCCGCGACGCGCGCCG CCGGCGCCTCGCCGCTGCCTTACCTCTACGTCTGCGCCTTCATCGCCAACGCGGCGAGCTTCGTGCTGCCAATCTCAAAC CCGGCCAACCTCGTGGTGTTCGGCGAGCGCATGCCGCATCTGACCGAATGGCTGCGCCAGTTCACCCTGCCCTCGATTGC GGCCATCGCCCTCACCTATGTGGCCTTGTGGCTGACCCAGCGCCGTGCGCTAAGCGACGAGACGCTGCGCACTGACGCCG ACAAGCCCCATCTGAGCCGCGAGGGCCGGCTCGCGGCGATGGGCATCATCGCGATTGCCGCCGTGCTGCTGACGGCGTCC GCGCTCGACGTGCAGCTGGGCCTGCCGACCTTCGTCTGCGGCGTGGTCACGGCGGCCGCGATCCTGCTGGTCAGCCGGCA GTCGCCCTGGCCGATCCTCAAGGGCGTGTCCTGGGGCGTGCTGCCGCTGGTCGGCGGGCTGTTCGTGATGGTGGAGGGAT TGGGCCGCCTTGGTGCGATCGGCCAGCTCAGCGCCTGGCTGCATCAGGGCGTCAGTCAGTCACCGGCGGGAACCGCCTGG GCTGCCGGCCTGATCACGGCGGTCGCCGACAACATCGCCAACAATCTGCCGGTCGGGCTCGTCGCAGGCTCGGTCGCGGC GAGCGATCACCTGCCGCAAGAAGTCATCCGCTCGATCCTGATCGGGGTCGATCTCGGGCCGAACATCTCGGTCACGGGCT CGCTCGCGACCATCCTGTGGCTGACGGCGCTGCGGCGCGAAAAGATCGAGGTGTCGGCCTGGCAATTTCTCAAGATCGGA CTCGTGGCAACGCCGCCAGCGCTGATTGCAGCACTAGCGGCGGCCATTCAAGGGTAG
Upstream 100 bases:
>100_bases CTGCTGCTGCCCGAGACCGGCGGAGCGGAGGCCGCGCATCCGGACGCCGCCGCCGCGCCCGCTATCCCCGCCGAATGATT TGCTCTAACGATCCCCGATC
Downstream 100 bases:
>100_bases AGCGTGCGCGGTGATCAGGCAGCCGCCTCGTAGTTGACCTCGCTCTCGGCGACCTTGGTCAGGAGATCGTCGGTCTTCTT CTCCTCGTTCAGGGTCTGGT
Product: putative arsenite permease
Products: ADP; phosphate; arsenite [Periplasm] [C]
Alternate protein names: Arsenic efflux pump protein [H]
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MLAHPTWLTYAIIITATAGVIIRPFRLPEAIWAVAGAVLLVALGLLPWTDALAGIRKGIDVYLFLIGMMLIAELARREGL FDYLAAYAVEHARGSPQLLFLLVYAVGTLVTVLLSNDATAIVLTPAVYAATRAAGASPLPYLYVCAFIANAASFVLPISN PANLVVFGERMPHLTEWLRQFTLPSIAAIALTYVALWLTQRRALSDETLRTDADKPHLSREGRLAAMGIIAIAAVLLTAS ALDVQLGLPTFVCGVVTAAAILLVSRQSPWPILKGVSWGVLPLVGGLFVMVEGLGRLGAIGQLSAWLHQGVSQSPAGTAW AAGLITAVADNIANNLPVGLVAGSVAASDHLPQEVIRSILIGVDLGPNISVTGSLATILWLTALRREKIEVSAWQFLKIG LVATPPALIAALAAAIQG
Sequences:
>Translated_418_residues MLAHPTWLTYAIIITATAGVIIRPFRLPEAIWAVAGAVLLVALGLLPWTDALAGIRKGIDVYLFLIGMMLIAELARREGL FDYLAAYAVEHARGSPQLLFLLVYAVGTLVTVLLSNDATAIVLTPAVYAATRAAGASPLPYLYVCAFIANAASFVLPISN PANLVVFGERMPHLTEWLRQFTLPSIAAIALTYVALWLTQRRALSDETLRTDADKPHLSREGRLAAMGIIAIAAVLLTAS ALDVQLGLPTFVCGVVTAAAILLVSRQSPWPILKGVSWGVLPLVGGLFVMVEGLGRLGAIGQLSAWLHQGVSQSPAGTAW AAGLITAVADNIANNLPVGLVAGSVAASDHLPQEVIRSILIGVDLGPNISVTGSLATILWLTALRREKIEVSAWQFLKIG LVATPPALIAALAAAIQG >Mature_418_residues MLAHPTWLTYAIIITATAGVIIRPFRLPEAIWAVAGAVLLVALGLLPWTDALAGIRKGIDVYLFLIGMMLIAELARREGL FDYLAAYAVEHARGSPQLLFLLVYAVGTLVTVLLSNDATAIVLTPAVYAATRAAGASPLPYLYVCAFIANAASFVLPISN PANLVVFGERMPHLTEWLRQFTLPSIAAIALTYVALWLTQRRALSDETLRTDADKPHLSREGRLAAMGIIAIAAVLLTAS ALDVQLGLPTFVCGVVTAAAILLVSRQSPWPILKGVSWGVLPLVGGLFVMVEGLGRLGAIGQLSAWLHQGVSQSPAGTAW AAGLITAVADNIANNLPVGLVAGSVAASDHLPQEVIRSILIGVDLGPNISVTGSLATILWLTALRREKIEVSAWQFLKIG LVATPPALIAALAAAIQG
Specific function: Involved in arsenical resistance. Thought to form the channel of an arsenite pump [H]
COG id: COG1055
COG function: function code P; Na+/H+ antiporter NhaD and related arsenite permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArsB family [H]
Homologues:
Organism=Escherichia coli, GI87082277, Length=369, Percent_Identity=28.4552845528455, Blast_Score=107, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000802 [H]
Pfam domain/function: PF02040 ArsB [H]
EC number: NA
Molecular weight: Translated: 43950; Mature: 43950
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAHPTWLTYAIIITATAGVIIRPFRLPEAIWAVAGAVLLVALGLLPWTDALAGIRKGID CCCCCHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH VYLFLIGMMLIAELARREGLFDYLAAYAVEHARGSPQLLFLLVYAVGTLVTVLLSNDATA HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCE IVLTPAVYAATRAAGASPLPYLYVCAFIANAASFVLPISNPANLVVFGERMPHLTEWLRQ EEECHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEECCCCCCEEEECCCCCHHHHHHHH FTLPSIAAIALTYVALWLTQRRALSDETLRTDADKPHLSREGRLAAMGIIAIAAVLLTAS HCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH ALDVQLGLPTFVCGVVTAAAILLVSRQSPWPILKGVSWGVLPLVGGLFVMVEGLGRLGAI HHHEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCH GQLSAWLHQGVSQSPAGTAWAAGLITAVADNIANNLPVGLVAGSVAASDHLPQEVIRSIL HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHCCCCHHHHHHHHH IGVDLGPNISVTGSLATILWLTALRREKIEVSAWQFLKIGLVATPPALIAALAAAIQG HCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHCC >Mature Secondary Structure MLAHPTWLTYAIIITATAGVIIRPFRLPEAIWAVAGAVLLVALGLLPWTDALAGIRKGID CCCCCHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH VYLFLIGMMLIAELARREGLFDYLAAYAVEHARGSPQLLFLLVYAVGTLVTVLLSNDATA HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCE IVLTPAVYAATRAAGASPLPYLYVCAFIANAASFVLPISNPANLVVFGERMPHLTEWLRQ EEECHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEECCCCCCEEEECCCCCHHHHHHHH FTLPSIAAIALTYVALWLTQRRALSDETLRTDADKPHLSREGRLAAMGIIAIAAVLLTAS HCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH ALDVQLGLPTFVCGVVTAAAILLVSRQSPWPILKGVSWGVLPLVGGLFVMVEGLGRLGAI HHHEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCH GQLSAWLHQGVSQSPAGTAWAAGLITAVADNIANNLPVGLVAGSVAASDHLPQEVIRSIL HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHCCCCHHHHHHHHH IGVDLGPNISVTGSLATILWLTALRREKIEVSAWQFLKIGLVATPPALIAALAAAIQG HCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; arsenite [Cytoplasm]; H2O [C]
Specific reaction: ATP + arsenite [Cytoplasm] + H2O = ADP + phosphate + arsenite [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12950922 [H]