Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is ytfP [H]

Identifier: 146340129

GI number: 146340129

Start: 3342989

End: 3344215

Strand: Direct

Name: ytfP [H]

Synonym: BRADO3144

Alternate gene names: 146340129

Gene position: 3342989-3344215 (Clockwise)

Preceding gene: 146340128

Following gene: 146340133

Centisome position: 44.83

GC content: 67.48

Gene sequence:

>1227_bases
ATGTCTTCTTCAAAGCATATTGCGGTTGTCGGGGCCGGCCCGGCCGGGCTGATGGCCGCCGAGGTGCTGGCCGCGGGCGG
AGCCGACGTGACCGTCTACGACGCGATGCCGTCGGTGGCGCGCAAGTTCCTGATGGCGGGGCGAGGGGGCCTCAATCTCA
CGCATAGCGAAGAGCTGGAGGCATTCCTGGCGCGTTATCGCGAAGCGGCGGACTGGCTTGCGCCCGCGGTCCAAGGCTTC
GCGCCACAACAACTGCGCGACTGGTGCGAAGCGTTGGGCCAACCGACCTTCGTCGGCTCCTCGGGCCGCGTGTTTCCGGT
CGCGATGAAAGCCTCGCCACTGCTCCGCGCCTGGCTGCGCCGGCTCGATGCGCACGGCGCGCGCACCGAGCTGCGCCATC
GCTGGACCGGCTGGGACGATCAGGGTCGTCTCATCTTCGACACGCCAAACGGTCCGCGCGCCATCGCAGCCGAGGCGACG
GTGCTCGCCCTCGGCGGCGCGAGCTGGCCGCGGCTCGGCTCCGATGGCGGCTGGGTATCGATCCTTGCAGCAAGAGGCGT
CGCGATCGCGCCGCTGCGGCCCTCCAATTGTGGCTTCAGCGTCGGCTGGTCCGACATCTTTCGCGACCGGTTCGAGGGCC
ATCCGCTGAAGGGTATCGCGCTGTCGTTTGGCGAGCGCAGTGTGCGCGGTGAGGCGGTCGTCACGCGAGATGGCATTGAA
GGCGGCGCAGTCTACGCGCTGTCGGCTGAATTGCGCGAGGCCATCGCGCTGAATGGCGAGACGGTCTTGCATGTCGCGTT
GCGGCCTGACCTCGAGACGCCCGATCTGATCAGGCGGCTGTCGGCACCGCGCGGAAAACAGTCGTTCTCGAACGTGCTGC
GCAAGGTGCTGCAGCTCTCTCCTGTGGCGATCGGGCTATTGCAGGAGGCGGCAAAGACGCAAGGGCAGTCATTGTCTTCG
CTGCCACCCGAGCGTCTCGCGGCGCTCGTTAACGACGTGCCAATCAAGCTGACGGGCATTGCGGGGCTCGCGCGCGCTAT
CTCCAGCGCCGGCGGTATCGCGCACGACGAGCTCGATGCTGACTACATGCTCAGGCGTCTCCCAGGCGTGTTCGCCGCGG
GAGAGATGCTGGACTGGGAGGCCCCGACCGGCGGCTATCTGCTGCAGGCCTCATTTGCGACGGGCGTGGCTGCGGGGAGG
GGCGTGCTGAAGTGGCTCAAATCGTAG

Upstream 100 bases:

>100_bases
CGGGCGTTCGCCGCGCCGAAGCGGCTTCGGCCGCGCAGGCGGATCAAGCCCGGGCATGACGCCCTTTGGTTTGGCAGGCC
GCGCGGCTTAAACTGGCGAG

Downstream 100 bases:

>100_bases
GGTGGGCAAAGCGCAGCGTGCACACCATCAGCGTCAACCGAGACCACGGTGGGCACGATGCGCCGCGGCTTTGCCGCGTC
GTCTCTTTGCCCACCCTACA

Product: putative signal peptide

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 407

Protein sequence:

>408_residues
MSSSKHIAVVGAGPAGLMAAEVLAAGGADVTVYDAMPSVARKFLMAGRGGLNLTHSEELEAFLARYREAADWLAPAVQGF
APQQLRDWCEALGQPTFVGSSGRVFPVAMKASPLLRAWLRRLDAHGARTELRHRWTGWDDQGRLIFDTPNGPRAIAAEAT
VLALGGASWPRLGSDGGWVSILAARGVAIAPLRPSNCGFSVGWSDIFRDRFEGHPLKGIALSFGERSVRGEAVVTRDGIE
GGAVYALSAELREAIALNGETVLHVALRPDLETPDLIRRLSAPRGKQSFSNVLRKVLQLSPVAIGLLQEAAKTQGQSLSS
LPPERLAALVNDVPIKLTGIAGLARAISSAGGIAHDELDADYMLRRLPGVFAAGEMLDWEAPTGGYLLQASFATGVAAGR
GVLKWLKS

Sequences:

>Translated_408_residues
MSSSKHIAVVGAGPAGLMAAEVLAAGGADVTVYDAMPSVARKFLMAGRGGLNLTHSEELEAFLARYREAADWLAPAVQGF
APQQLRDWCEALGQPTFVGSSGRVFPVAMKASPLLRAWLRRLDAHGARTELRHRWTGWDDQGRLIFDTPNGPRAIAAEAT
VLALGGASWPRLGSDGGWVSILAARGVAIAPLRPSNCGFSVGWSDIFRDRFEGHPLKGIALSFGERSVRGEAVVTRDGIE
GGAVYALSAELREAIALNGETVLHVALRPDLETPDLIRRLSAPRGKQSFSNVLRKVLQLSPVAIGLLQEAAKTQGQSLSS
LPPERLAALVNDVPIKLTGIAGLARAISSAGGIAHDELDADYMLRRLPGVFAAGEMLDWEAPTGGYLLQASFATGVAAGR
GVLKWLKS
>Mature_407_residues
SSSKHIAVVGAGPAGLMAAEVLAAGGADVTVYDAMPSVARKFLMAGRGGLNLTHSEELEAFLARYREAADWLAPAVQGFA
PQQLRDWCEALGQPTFVGSSGRVFPVAMKASPLLRAWLRRLDAHGARTELRHRWTGWDDQGRLIFDTPNGPRAIAAEATV
LALGGASWPRLGSDGGWVSILAARGVAIAPLRPSNCGFSVGWSDIFRDRFEGHPLKGIALSFGERSVRGEAVVTRDGIEG
GAVYALSAELREAIALNGETVLHVALRPDLETPDLIRRLSAPRGKQSFSNVLRKVLQLSPVAIGLLQEAAKTQGQSLSSL
PPERLAALVNDVPIKLTGIAGLARAISSAGGIAHDELDADYMLRRLPGVFAAGEMLDWEAPTGGYLLQASFATGVAAGRG
VLKWLKS

Specific function: Unknown

COG id: COG2081

COG function: function code R; Predicted flavoproteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004792
- InterPro:   IPR013027 [H]

Pfam domain/function: PF03486 HI0933_like [H]

EC number: NA

Molecular weight: Translated: 43204; Mature: 43073

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSKHIAVVGAGPAGLMAAEVLAAGGADVTVYDAMPSVARKFLMAGRGGLNLTHSEELE
CCCCCEEEEEECCCHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCHHHHH
AFLARYREAADWLAPAVQGFAPQQLRDWCEALGQPTFVGSSGRVFPVAMKASPLLRAWLR
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEECCCCCEEEEEECCCHHHHHHHH
RLDAHGARTELRHRWTGWDDQGRLIFDTPNGPRAIAAEATVLALGGASWPRLGSDGGWVS
HHHCCCCHHHHHHCCCCCCCCCEEEEECCCCCCEEECCEEEEEECCCCCCCCCCCCCEEE
ILAARGVAIAPLRPSNCGFSVGWSDIFRDRFEGHPLKGIALSFGERSVRGEAVVTRDGIE
EEECCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEEECCCC
GGAVYALSAELREAIALNGETVLHVALRPDLETPDLIRRLSAPRGKQSFSNVLRKVLQLS
CCEEEEEHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHC
PVAIGLLQEAAKTQGQSLSSLPPERLAALVNDVPIKLTGIAGLARAISSAGGIAHDELDA
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCCCHHCCH
DYMLRRLPGVFAAGEMLDWEAPTGGYLLQASFATGVAAGRGVLKWLKS
HHHHHHCCCCCCCCCEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SSSKHIAVVGAGPAGLMAAEVLAAGGADVTVYDAMPSVARKFLMAGRGGLNLTHSEELE
CCCCEEEEEECCCHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCHHHHH
AFLARYREAADWLAPAVQGFAPQQLRDWCEALGQPTFVGSSGRVFPVAMKASPLLRAWLR
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEECCCCCEEEEEECCCHHHHHHHH
RLDAHGARTELRHRWTGWDDQGRLIFDTPNGPRAIAAEATVLALGGASWPRLGSDGGWVS
HHHCCCCHHHHHHCCCCCCCCCEEEEECCCCCCEEECCEEEEEECCCCCCCCCCCCCEEE
ILAARGVAIAPLRPSNCGFSVGWSDIFRDRFEGHPLKGIALSFGERSVRGEAVVTRDGIE
EEECCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEEECCCC
GGAVYALSAELREAIALNGETVLHVALRPDLETPDLIRRLSAPRGKQSFSNVLRKVLQLS
CCEEEEEHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHC
PVAIGLLQEAAKTQGQSLSSLPPERLAALVNDVPIKLTGIAGLARAISSAGGIAHDELDA
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCCCHHCCH
DYMLRRLPGVFAAGEMLDWEAPTGGYLLQASFATGVAAGRGVLKWLKS
HHHHHHCCCCCCCCCEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]