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The map label for this gene is 146339636

Identifier: 146339636

GI number: 146339636

Start: 2820546

End: 2821793

Strand: Direct

Name: 146339636

Synonym: BRADO2629

Alternate gene names: NA

Gene position: 2820546-2821793 (Clockwise)

Preceding gene: 146339635

Following gene: 146339637

Centisome position: 37.83

GC content: 69.31

Gene sequence:

>1248_bases
ATGACCAAGACCGCTCACATCATCGGCGCCGGGATCTCCGGCTTCTCCGCCGGCGTGCGCCTCGCCAAGGCGGGCTACAC
CGTGCACGTCCACGAGGCCACGCAGCAGCTCGGCGGCCGCTGCCGCTCCTATTATGACGCCGCGACCGATCTCGTGATCG
ACAACGGCAACCATCTCCTGCTGTCGGCCAACCACCATGTGCTCGATTATGCCCGTGCGATCGGCTCGGAGGCAGGACTG
GTCGGGCCGAAGGAGGCGCAGTTCGCCTTCGTCGACATCAAGACCGGGCAGCGCTGGCTGCTCGATCTCGGCAGCGGCCG
GCTGCCGCTCTGGGTGTTCGACGAGGGGCGCCGCGTGCCAGACACGTCGCTGGGCGATTACCTCGCGCTGTCGCCGCTGA
TCTGGGCCGGCACGTCGAAGACGATCGGCGACACCATTCCCTGCAAGGGGACGCTGTATGACCGGCTGGTTCAGCCGCTA
CTGCTGGCGGCGCTGAATTGCGACCCGCCGGAAGGCTCGGCGGGGCTCGCCGGCGCCATCGTTCGCGAGACTCTGCTGGC
CGGCGGCCAGGCCTGCCGTCCGCTGATTGCCCGCGACGGCCTCTCCGGCGTTCTGATCGATCCGGCCGTGAAATTTCTGG
AAGGCAATGGCGGCAGCGTGCGGATCGGCCGCGAGCTGCGCGGGCTGGAAAGCGCCGCCGGTCGCGTCACCGGCCTGAAG
TTCGGCGACGAGACGGTCGCGCTCGGCGCCTCCGATGTCGTCGTGCTCGCGGTGCCGCCGCGGCCGGCGATGGCGCTATT
GCCGGGACTGACCGGGCCGACGAAGTATCGCGCCATCGTCAATGCTCATTTCCGCATCACGCCGCCGAAGGATGCGCCGG
CTTTGCTCGGCGTCGTCGGTGGCCTGATCGAGTGGCTGTTCGCCTTCCCGCAACGTCTGTCGGTCACGATCAGCAATGGC
GACAGGCTGGTCGACATGCCGCGTGAGGAACTCGCGAGCGCGATCTGGGCCGACGTCTGCAAGGCCGCTGGCATCTCGGC
CGAGCTGCCACCCTGGCAGATCGTGCGCGAGCGCCGCGCCACCTTCGAGGCGACGCCGGAGCAGAACGCGCTGCGTCCGG
GCGTGAGGACCGCGTTCGGCAATTTGGCGCTCGCCGGGGACTGGACCGATACCGGCCTGCCGGCGACGATCGAGGGATCG
GTGCGCTCCGGCGATCGGGCGGCCGATCTGCTGCTCGGGCAGGGCTGA

Upstream 100 bases:

>100_bases
TCGATCTGCTGATGGCCCGTGGCTTCGCGCTGCCGCGCGAGCCCGTGCGCGTGAGCAAGCTCACGAAGATCAGCATCATC
CTCCGTTACGCTCTGATCTG

Downstream 100 bases:

>100_bases
CGGCGCAGGCTTCTCGTTTGCGCGTCGTCGATCCCTCTTCAAGCTTCGCGTATGCCGACCAGGGCGCCCCATCAAAGGTG
TCGTCCCGGCCTCCGAGCCG

Product: putative phytoene dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 414

Protein sequence:

>415_residues
MTKTAHIIGAGISGFSAGVRLAKAGYTVHVHEATQQLGGRCRSYYDAATDLVIDNGNHLLLSANHHVLDYARAIGSEAGL
VGPKEAQFAFVDIKTGQRWLLDLGSGRLPLWVFDEGRRVPDTSLGDYLALSPLIWAGTSKTIGDTIPCKGTLYDRLVQPL
LLAALNCDPPEGSAGLAGAIVRETLLAGGQACRPLIARDGLSGVLIDPAVKFLEGNGGSVRIGRELRGLESAAGRVTGLK
FGDETVALGASDVVVLAVPPRPAMALLPGLTGPTKYRAIVNAHFRITPPKDAPALLGVVGGLIEWLFAFPQRLSVTISNG
DRLVDMPREELASAIWADVCKAAGISAELPPWQIVRERRATFEATPEQNALRPGVRTAFGNLALAGDWTDTGLPATIEGS
VRSGDRAADLLLGQG

Sequences:

>Translated_415_residues
MTKTAHIIGAGISGFSAGVRLAKAGYTVHVHEATQQLGGRCRSYYDAATDLVIDNGNHLLLSANHHVLDYARAIGSEAGL
VGPKEAQFAFVDIKTGQRWLLDLGSGRLPLWVFDEGRRVPDTSLGDYLALSPLIWAGTSKTIGDTIPCKGTLYDRLVQPL
LLAALNCDPPEGSAGLAGAIVRETLLAGGQACRPLIARDGLSGVLIDPAVKFLEGNGGSVRIGRELRGLESAAGRVTGLK
FGDETVALGASDVVVLAVPPRPAMALLPGLTGPTKYRAIVNAHFRITPPKDAPALLGVVGGLIEWLFAFPQRLSVTISNG
DRLVDMPREELASAIWADVCKAAGISAELPPWQIVRERRATFEATPEQNALRPGVRTAFGNLALAGDWTDTGLPATIEGS
VRSGDRAADLLLGQG
>Mature_414_residues
TKTAHIIGAGISGFSAGVRLAKAGYTVHVHEATQQLGGRCRSYYDAATDLVIDNGNHLLLSANHHVLDYARAIGSEAGLV
GPKEAQFAFVDIKTGQRWLLDLGSGRLPLWVFDEGRRVPDTSLGDYLALSPLIWAGTSKTIGDTIPCKGTLYDRLVQPLL
LAALNCDPPEGSAGLAGAIVRETLLAGGQACRPLIARDGLSGVLIDPAVKFLEGNGGSVRIGRELRGLESAAGRVTGLKF
GDETVALGASDVVVLAVPPRPAMALLPGLTGPTKYRAIVNAHFRITPPKDAPALLGVVGGLIEWLFAFPQRLSVTISNGD
RLVDMPREELASAIWADVCKAAGISAELPPWQIVRERRATFEATPEQNALRPGVRTAFGNLALAGDWTDTGLPATIEGSV
RSGDRAADLLLGQG

Specific function: Possible flavoprotein oxidoreductase. Probably part of an operon y4aABCD involved in the synthesis of an isoprenoid compound [H]

COG id: COG2907

COG function: function code R; Predicted NAD/FAD-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To phytoene dehydrogenase and to amine oxidase [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002937
- InterPro:   IPR016040
- InterPro:   IPR003042
- InterPro:   IPR017830 [H]

Pfam domain/function: PF01593 Amino_oxidase [H]

EC number: NA

Molecular weight: Translated: 43680; Mature: 43548

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKTAHIIGAGISGFSAGVRLAKAGYTVHVHEATQQLGGRCRSYYDAATDLVIDNGNHLL
CCCCEEEEECCCCCHHHCEEEEECCCEEEEEHHHHHHHHHHHHHHHHHCEEEEECCCEEE
LSANHHVLDYARAIGSEAGLVGPKEAQFAFVDIKTGQRWLLDLGSGRLPLWVFDEGRRVP
EECCCHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCEEEEECCCCCCC
DTSLGDYLALSPLIWAGTSKTIGDTIPCKGTLYDRLVQPLLLAALNCDPPEGSAGLAGAI
CCCCCCHHHHCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
VRETLLAGGQACRPLIARDGLSGVLIDPAVKFLEGNGGSVRIGRELRGLESAAGRVTGLK
HHHHHHHCCHHHHHHHHCCCCCCEEECCHHHEEECCCCEEEECHHHHHHHHHCCCEEEEE
FGDETVALGASDVVVLAVPPRPAMALLPGLTGPTKYRAIVNAHFRITPPKDAPALLGVVG
ECCCEEEECCCCEEEEEECCCCHHHHCCCCCCCHHEEEEEEEEEEEECCCCCHHHHHHHH
GLIEWLFAFPQRLSVTISNGDRLVDMPREELASAIWADVCKAAGISAELPPWQIVRERRA
HHHHHHHHCCCCEEEEECCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHC
TFEATPEQNALRPGVRTAFGNLALAGDWTDTGLPATIEGSVRSGDRAADLLLGQG
CCCCCCCCCCCCCCHHHHHCCEEEECCCCCCCCCEEEECCCCCCCHHHHHHCCCC
>Mature Secondary Structure 
TKTAHIIGAGISGFSAGVRLAKAGYTVHVHEATQQLGGRCRSYYDAATDLVIDNGNHLL
CCCEEEEECCCCCHHHCEEEEECCCEEEEEHHHHHHHHHHHHHHHHHCEEEEECCCEEE
LSANHHVLDYARAIGSEAGLVGPKEAQFAFVDIKTGQRWLLDLGSGRLPLWVFDEGRRVP
EECCCHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCEEEEECCCCCCC
DTSLGDYLALSPLIWAGTSKTIGDTIPCKGTLYDRLVQPLLLAALNCDPPEGSAGLAGAI
CCCCCCHHHHCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
VRETLLAGGQACRPLIARDGLSGVLIDPAVKFLEGNGGSVRIGRELRGLESAAGRVTGLK
HHHHHHHCCHHHHHHHHCCCCCCEEECCHHHEEECCCCEEEECHHHHHHHHHCCCEEEEE
FGDETVALGASDVVVLAVPPRPAMALLPGLTGPTKYRAIVNAHFRITPPKDAPALLGVVG
ECCCEEEECCCCEEEEEECCCCHHHHCCCCCCCHHEEEEEEEEEEEECCCCCHHHHHHHH
GLIEWLFAFPQRLSVTISNGDRLVDMPREELASAIWADVCKAAGISAELPPWQIVRERRA
HHHHHHHHCCCCEEEEECCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHC
TFEATPEQNALRPGVRTAFGNLALAGDWTDTGLPATIEGSVRSGDRAADLLLGQG
CCCCCCCCCCCCCCHHHHHCCEEEECCCCCCCCCEEEECCCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]