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The map label for this gene is hpcR [H]

Identifier: 146339604

GI number: 146339604

Start: 2780409

End: 2780915

Strand: Direct

Name: hpcR [H]

Synonym: BRADO2596

Alternate gene names: 146339604

Gene position: 2780409-2780915 (Clockwise)

Preceding gene: 146339598

Following gene: 146339605

Centisome position: 37.29

GC content: 64.5

Gene sequence:

>507_bases
GTGGCGATGAGCGACAGCAAGAAGGGGTTCAAGGATGCGCGCAAGGTCCCGATGCGCGACTTCTCGCAATCGCTGCCCAT
GGCGCTGCTGCGGGCCCGCGAAGCTGTCATGCGGCAGTTTCGGCCCAATCTGCGCGCGCATGGTCTGACGGAGCAGCAAT
GGCGCATTCTGCGCGCGCTGGCCGCCGTCGATGCGATCGAGGTCACGGAGCTGGCGCGTGTCGCCTTCCTGCTCGGTCCC
AGCCTGTCCCGCATTCTGCGTGACCTGGAGGCGCGTGGCCTGATTCAGCGCGAGGTGGATGCGCGCGATATGCGCAGGGG
CGTGCTGTCGATTTCCACGAAGGGGTTGAAGCTGATTGCGCAGGTTGCGCCGAACTCAGAGGCGATCTACGCCTCGATTG
CCCGCCGCTACGGCGCGCGAAAACTTGCCGCGCTGCACAAAATGCTGGATGAGCTCGAGCAGAGCATCGGCGGCGATGGT
GAGATGGTGTCGGATGCCGATGAATGA

Upstream 100 bases:

>100_bases
TCGAGGAAACAGGTGGCGGCAGTTGATTAACATGTTAAGTTTATTGCCGCAAATCCAAACGGCGATTGCTGCAGTGCAAA
TATCGGAAGGCGGCCAGAGG

Downstream 100 bases:

>100_bases
CGTCGTGCAGAACCCGCGCAAATTCAGGCCTGATCAGTCCTTGCGCTTGGCAGTGACTTCAACAGTTTGATAAGAAGCGA
TGCAGTCGAGCGGAGATGGC

Product: homoprotocatechuate degradative operon repressor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MAMSDSKKGFKDARKVPMRDFSQSLPMALLRAREAVMRQFRPNLRAHGLTEQQWRILRALAAVDAIEVTELARVAFLLGP
SLSRILRDLEARGLIQREVDARDMRRGVLSISTKGLKLIAQVAPNSEAIYASIARRYGARKLAALHKMLDELEQSIGGDG
EMVSDADE

Sequences:

>Translated_168_residues
MAMSDSKKGFKDARKVPMRDFSQSLPMALLRAREAVMRQFRPNLRAHGLTEQQWRILRALAAVDAIEVTELARVAFLLGP
SLSRILRDLEARGLIQREVDARDMRRGVLSISTKGLKLIAQVAPNSEAIYASIARRYGARKLAALHKMLDELEQSIGGDG
EMVSDADE
>Mature_167_residues
AMSDSKKGFKDARKVPMRDFSQSLPMALLRAREAVMRQFRPNLRAHGLTEQQWRILRALAAVDAIEVTELARVAFLLGPS
LSRILRDLEARGLIQREVDARDMRRGVLSISTKGLKLIAQVAPNSEAIYASIARRYGARKLAALHKMLDELEQSIGGDGE
MVSDADE

Specific function: Repressor for the homoprotocatechuate catabolic pathway hpc operon [H]

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012712
- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 18730; Mature: 18599

Theoretical pI: Translated: 10.63; Mature: 10.63

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMSDSKKGFKDARKVPMRDFSQSLPMALLRAREAVMRQFRPNLRAHGLTEQQWRILRAL
CCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHH
AAVDAIEVTELARVAFLLGPSLSRILRDLEARGLIQREVDARDMRRGVLSISTKGLKLIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVAPNSEAIYASIARRYGARKLAALHKMLDELEQSIGGDGEMVSDADE
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
AMSDSKKGFKDARKVPMRDFSQSLPMALLRAREAVMRQFRPNLRAHGLTEQQWRILRAL
CCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHH
AAVDAIEVTELARVAFLLGPSLSRILRDLEARGLIQREVDARDMRRGVLSISTKGLKLIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVAPNSEAIYASIARRYGARKLAALHKMLDELEQSIGGDGEMVSDADE
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8384293; 8550403 [H]