Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is cya3 [H]

Identifier: 146339432

GI number: 146339432

Start: 2574939

End: 2576486

Strand: Direct

Name: cya3 [H]

Synonym: BRADO2418

Alternate gene names: 146339432

Gene position: 2574939-2576486 (Clockwise)

Preceding gene: 146339430

Following gene: 146339438

Centisome position: 34.53

GC content: 64.6

Gene sequence:

>1548_bases
ATGATCGACCGACGCGCGCCAGCAGCCTACAGATTTGGCTCATTTTCCCTCGATGCCGAGACCGGCGCGCTGCTTCGCGA
CGGTGCACCTAGTTTGCTTGGCCAGCGCGGCACGGCGCTGCTGCGCCTGCTGCTGGAGCGAGCCGCAGTTCCGGTGAGCA
AGGACGCGTTGATCGAAGCCGCGTGGCCGGGGCTCGCCGTCGACGATAGCAATCTCACCGTGCAGATTGCAGCGCTTCGC
CGCGCACTCGAGCCAGGCGGCGCATGCTGGATCGAGACCCTTCCACGACGCGGCTATCGCTATATTGGCCCACCGGTGAC
GCGCGTCGAAGCGAACGCCGAGGCCTCTCGACCGGCCGCGCTTCCTAGACCCGAAAAGCCTTCGATTGCCGTGCTGCCGT
TCGAGCAATCCGGCGAGGCCGGCTGGTTCGCCGACAGCATCGTCGACGACATCATCACCGGAATGTCGCGCATCAGGTGG
CTGTTCGTGATCGCGCGCAACTCGAGTTTCGTTTGGCGCGGTCGCATCGCTGACGTGAAGCAAGTCGGCCATGATCTCGG
GGTACGTTATGTCTTGCAGGGTAGCGTGCGCCGCGCCGATGATCGCGTCCGCATCAACGCGCAGCTCGCGGACGCCACAA
GTGGTGCACAGATTTGGGCCGAACGCTACGACCGCACCGTGGGCGACCTGTTCGCCCTGCAGGACGAGATCGCGCTCGCT
GTCGTCGCCGCCATCGAGCCGAGCCTGCGGCGCGCCGAACTTGACCGTATCCTCCGCAAACGGCCCGACAGTCTGGATGC
CTACGAGCTTGTTCTGCGCGCGCAACCCGATGTTGATTCCGGCATGCCCGATCGCGCTCATGTCGCTCTGACGCAGTTGT
CGCGCGCGCTTGCTCTCGAACCCACCTATGGCCTCGCTCACGGACTGGCCGCGATGAGTCATCACAACCGCTTTTTGCGC
GCCGGGCTGAACGAAGACGACCGCATCGCATCGGTGCGGCATGCGCGCCTTGCAATCGAGCATGGCCGCGACGATGCGCT
GGCGCTTACCTTTGCCGGGTTCTCGCTTGGCATGGACGCGCATGATCGCCAGGCCGCCTTTGCGGCCTTCGAAGCCGCAC
TTGCCTTAAGTCCATCGACCGCGCTTGCCTGGATCCTCGGTAGCGTCGTAGCCGGATGGGCGGGCGACGCTGAGCGTGCG
ATTGAGTGGAGCGAGCGCGGCATGCGCTTGAGTCCGTTCGATCCCTGGGCATTCGCGGCTTACGACGCCCAGGCGCTCGG
TCATTTCAACCGCGGTAGTTACGCCGAGGCGGCCAGCGCCGCCTACAAGGCCAACCTCGCCAATCCCGGTCATAGCATCA
CCTGGGTGCAACTCGCCGCTTCGCTTTCCGCGCTCGGACGTATGGAAGAGGCGAGGGCCGCGGCAGCTTGCGTGCTGGAA
TTGCAGCCTGGCTTTCGCATCAGCGGACAATTCGCCGGCGTAGATTGCGCGCCTGAATTGGCATCGAAACTAGGCAAGTC
CCTTCGCGCATCTGGATTGCCCGAATGA

Upstream 100 bases:

>100_bases
CATGATGGCTCTCCAATGGGTGTTCAGGGAGCTTGAATCTGCCGGTAGATCATCCCAAGGTCGTGAAGCATCTCCGAAAT
TGTTACAAAATGTCGCCAAA

Downstream 100 bases:

>100_bases
TCCGTCGACGCGCAAACACATCGGTTATTGTGAAGGGTTTCGGATGCCGGCCGCATGATTGACGGTGCGGCACATTCGGG
CGGCCGGCGTCCGAAAGCCT

Product: transcriptional regulator

Products: NA

Alternate protein names: ATP pyrophosphate-lyase 3; Adenylyl cyclase 3 [H]

Number of amino acids: Translated: 515; Mature: 515

Protein sequence:

>515_residues
MIDRRAPAAYRFGSFSLDAETGALLRDGAPSLLGQRGTALLRLLLERAAVPVSKDALIEAAWPGLAVDDSNLTVQIAALR
RALEPGGACWIETLPRRGYRYIGPPVTRVEANAEASRPAALPRPEKPSIAVLPFEQSGEAGWFADSIVDDIITGMSRIRW
LFVIARNSSFVWRGRIADVKQVGHDLGVRYVLQGSVRRADDRVRINAQLADATSGAQIWAERYDRTVGDLFALQDEIALA
VVAAIEPSLRRAELDRILRKRPDSLDAYELVLRAQPDVDSGMPDRAHVALTQLSRALALEPTYGLAHGLAAMSHHNRFLR
AGLNEDDRIASVRHARLAIEHGRDDALALTFAGFSLGMDAHDRQAAFAAFEAALALSPSTALAWILGSVVAGWAGDAERA
IEWSERGMRLSPFDPWAFAAYDAQALGHFNRGSYAEAASAAYKANLANPGHSITWVQLAASLSALGRMEEARAAAACVLE
LQPGFRISGQFAGVDCAPELASKLGKSLRASGLPE

Sequences:

>Translated_515_residues
MIDRRAPAAYRFGSFSLDAETGALLRDGAPSLLGQRGTALLRLLLERAAVPVSKDALIEAAWPGLAVDDSNLTVQIAALR
RALEPGGACWIETLPRRGYRYIGPPVTRVEANAEASRPAALPRPEKPSIAVLPFEQSGEAGWFADSIVDDIITGMSRIRW
LFVIARNSSFVWRGRIADVKQVGHDLGVRYVLQGSVRRADDRVRINAQLADATSGAQIWAERYDRTVGDLFALQDEIALA
VVAAIEPSLRRAELDRILRKRPDSLDAYELVLRAQPDVDSGMPDRAHVALTQLSRALALEPTYGLAHGLAAMSHHNRFLR
AGLNEDDRIASVRHARLAIEHGRDDALALTFAGFSLGMDAHDRQAAFAAFEAALALSPSTALAWILGSVVAGWAGDAERA
IEWSERGMRLSPFDPWAFAAYDAQALGHFNRGSYAEAASAAYKANLANPGHSITWVQLAASLSALGRMEEARAAAACVLE
LQPGFRISGQFAGVDCAPELASKLGKSLRASGLPE
>Mature_515_residues
MIDRRAPAAYRFGSFSLDAETGALLRDGAPSLLGQRGTALLRLLLERAAVPVSKDALIEAAWPGLAVDDSNLTVQIAALR
RALEPGGACWIETLPRRGYRYIGPPVTRVEANAEASRPAALPRPEKPSIAVLPFEQSGEAGWFADSIVDDIITGMSRIRW
LFVIARNSSFVWRGRIADVKQVGHDLGVRYVLQGSVRRADDRVRINAQLADATSGAQIWAERYDRTVGDLFALQDEIALA
VVAAIEPSLRRAELDRILRKRPDSLDAYELVLRAQPDVDSGMPDRAHVALTQLSRALALEPTYGLAHGLAAMSHHNRFLR
AGLNEDDRIASVRHARLAIEHGRDDALALTFAGFSLGMDAHDRQAAFAAFEAALALSPSTALAWILGSVVAGWAGDAERA
IEWSERGMRLSPFDPWAFAAYDAQALGHFNRGSYAEAASAAYKANLANPGHSITWVQLAASLSALGRMEEARAAAACVLE
LQPGFRISGQFAGVDCAPELASKLGKSLRASGLPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 5 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00211 Guanylate_cyc; PF00515 TPR_1 [H]

EC number: =4.6.1.1 [H]

Molecular weight: Translated: 55549; Mature: 55549

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDRRAPAAYRFGSFSLDAETGALLRDGAPSLLGQRGTALLRLLLERAAVPVSKDALIEA
CCCCCCCCCEECCCEEECCCCCCHHHCCCHHHHCCHHHHHHHHHHHHHCCCCCHHHHHEE
AWPGLAVDDSNLTVQIAALRRALEPGGACWIETLPRRGYRYIGPPVTRVEANAEASRPAA
CCCCCEEECCCCEEEHHHHHHHCCCCCCCHHHHHCCCCCEECCCCCEEEECCCCCCCCCC
LPRPEKPSIAVLPFEQSGEAGWFADSIVDDIITGMSRIRWLFVIARNSSFVWRGRIADVK
CCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHEEEEEEEEECCCEEEECCHHHHH
QVGHDLGVRYVLQGSVRRADDRVRINAQLADATSGAQIWAERYDRTVGDLFALQDEIALA
HHHHHHCEEEEEECCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHH
VVAAIEPSLRRAELDRILRKRPDSLDAYELVLRAQPDVDSGMPDRAHVALTQLSRALALE
HHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHCCC
PTYGLAHGLAAMSHHNRFLRAGLNEDDRIASVRHARLAIEHGRDDALALTFAGFSLGMDA
CCHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHEECCCCCEEEEEEECCEECCCC
HDRQAAFAAFEAALALSPSTALAWILGSVVAGWAGDAERAIEWSERGMRLSPFDPWAFAA
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHH
YDAQALGHFNRGSYAEAASAAYKANLANPGHSITWVQLAASLSALGRMEEARAAAACVLE
HHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEE
LQPGFRISGQFAGVDCAPELASKLGKSLRASGLPE
ECCCCEECCEECCCCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIDRRAPAAYRFGSFSLDAETGALLRDGAPSLLGQRGTALLRLLLERAAVPVSKDALIEA
CCCCCCCCCEECCCEEECCCCCCHHHCCCHHHHCCHHHHHHHHHHHHHCCCCCHHHHHEE
AWPGLAVDDSNLTVQIAALRRALEPGGACWIETLPRRGYRYIGPPVTRVEANAEASRPAA
CCCCCEEECCCCEEEHHHHHHHCCCCCCCHHHHHCCCCCEECCCCCEEEECCCCCCCCCC
LPRPEKPSIAVLPFEQSGEAGWFADSIVDDIITGMSRIRWLFVIARNSSFVWRGRIADVK
CCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHEEEEEEEEECCCEEEECCHHHHH
QVGHDLGVRYVLQGSVRRADDRVRINAQLADATSGAQIWAERYDRTVGDLFALQDEIALA
HHHHHHCEEEEEECCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHH
VVAAIEPSLRRAELDRILRKRPDSLDAYELVLRAQPDVDSGMPDRAHVALTQLSRALALE
HHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHCCC
PTYGLAHGLAAMSHHNRFLRAGLNEDDRIASVRHARLAIEHGRDDALALTFAGFSLGMDA
CCHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHEECCCCCEEEEEEECCEECCCC
HDRQAAFAAFEAALALSPSTALAWILGSVVAGWAGDAERAIEWSERGMRLSPFDPWAFAA
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHH
YDAQALGHFNRGSYAEAASAAYKANLANPGHSITWVQLAASLSALGRMEEARAAAACVLE
HHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEE
LQPGFRISGQFAGVDCAPELASKLGKSLRASGLPE
ECCCCEECCEECCCCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10485295; 11481432 [H]