| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146338897
Identifier: 146338897
GI number: 146338897
Start: 1963483
End: 1965099
Strand: Reverse
Name: 146338897
Synonym: BRADO1836
Alternate gene names: NA
Gene position: 1965099-1963483 (Counterclockwise)
Preceding gene: 146338898
Following gene: 146338863
Centisome position: 26.35
GC content: 69.08
Gene sequence:
>1617_bases ATGACAGCGTCCCCAACCTCTGGCCCCACAGCAACGCCTGAGGGCTTCAGAACCATCACCCCGAGCGAGCTGCGTCGCCG CTGGCGCGCCGGCGAGGAGGTGGCGCTGCTCGACGTCCGCGAGGAAGGCCCCTACTCGCTGTCGCATCCGTTCTTCGCGG TGTCGCTGCCGCTGTCGCAGATCGAGCTGCGCATGCTCGACCTGGTGCCGCGACTGACCGCGCCGGTCGTGGTCTATGAT GACGGCGAAGGCTATGCCGCGCGCGCTCTGCCGCGCATCCGGGCCCTGGGCTATACCGATGTTGCCGTCCTCGAGGGCGG GCTGTCAGCCTACGCCCGCGTCGGCGAGGTGTTCCGTGACGTCAACGTGCCGAGCAAGGCGTTCGGCGAACTGGTCGAGG CGATCCGGCATACGCCGTCACTATCCGCGGACGAGGCGAAGGCGCTGATCGAGCGCGAGAGCAATCTCGTGGTGCTCGAT GCCCGCCGCTTCGAGGAATACCGCACCATGAGCATTCCGCGCGGGGTCAGCGTGCCCGGCGGCGAGCTGGCGTTCCGGGC GCGCGAGATCGCGCCGTCGCCGGATACCACGATCATCGTCAATTGCGCCGGCCGCACCCGCTCGATCATCGGCACGCAGT CGCTGATCAATGCGGGACTGCGCAACAAGATCTACGCGCTGCGCAACGGCACGATCGGCTGGACGCTCGCCGGCCACAAG GTCGAGCGCGGCAACACTGTCCGCTTCCTGGAGCGGCCGCAGGCGAGCTACGCGGCCGCGCTGGCCAACGCCAAGACCTG GGCCGAGCGGGTCGGCGTCAGGGTTCTCGATGCTGCGACATTCGCGCGCTATCAGGCAGAAGCCGGGACACGCACGCTGT ATTGTCTCGACGTCCGCACACCGGAAGAATACGCCGCCGGACATCCCGCCGGCTTCGTGTCGGCGCCGGGCGGCCAGCTG GTGCAGGCCACCGACGAATGGGTCGGCGTCCGCGGCGCGCGGCTGGTACTGTTCGACGATGATGGCGTGCGCGCGCGCAT GACCGCGTCGTGGCTGACGCAGATGGGCTGGGATGCCTCCGTCGTCGGACCGGATGTGGTGGCGCCGACGGAGACCGCGC CGCGCACCGCGCGGCGGCCGCCGCTGCCGGACATTCTCACGGCCGCGATCGACGTTGCCGGGCTCGCGGCACGACGTGCC GCGCTGACGATCGTCGATCTCACGCGGAGCCCGGGCTACACGGCCGGGCACATTCCCGGAGCGCATTTCCTGCTGGCGTC GCGATTTGCGTCCGATCTCGCCAAGCTGCCCGGAGACGGCGGAATCGTGCTGACCAGCATTGACGGCGCCGAGGCGGCCT TCGCGCTAGCCGATGCGCGGGCCGCAACCTCACGCGAACTGCTTGTGCTCAATGGGGGTACGCGCGCCTGGGCGGCAGCA GGACATCCGTTGGACACGGAGCGGCCGTCGTGGATCTCGTCGCCGGACGACGTCTACAAGCGTCCCTACGAAGGCACCGA CAACGCCGCGGAGGCGATGCAGGCCTATATCGACTGGGAGCTGCAGCTGGTCGCGCAGCTCGCCAACGACTCGGTGTCGA ACTTCCACGTCGTGTAG
Upstream 100 bases:
>100_bases ATCAGCATCCACGTCTACGGCGGCAATATCGGCCGCATCCGCCGTGCGGTTTACGATCCGGACACCGGGGCCGCCCAGGA CTTCATCTCCGGATATTCGA
Downstream 100 bases:
>100_bases TCGAACAGGACTGTAGAGGTGGGCAAGGCGGCATTCGCGAAGCGAATGCAGCGTGCCCACCATTGGCGACAGCGGAGAAC GATGATGGTGGGCACGCGCC
Product: putative thiosulfate sulfurtransferase
Products: NA
Alternate protein names: Rhodanese Domain Protein; Rhodanese-Like Protein; Thiosulfate Sulfurtransferase; Rhodanese-Like Domain-Containing Protein; Transferase; Sulfurtransferase; Rhodanese Domain Protein/Cystathionine Beta-Lyase; Rhodanese-Related Sulfurtransferase; Rhodanese-Like Proteine; Transferase/Cystathione Beta-Lyase; Rhodanese-Like Domain-Containing; Rhodanese-Like Sulfur Transferase; Thiosulfate Sulfurtransferase Rhodanese-Like; Rhodanese-Like Protein Sulfurtransferase; Cystathionine Beta-Lyase
Number of amino acids: Translated: 538; Mature: 537
Protein sequence:
>538_residues MTASPTSGPTATPEGFRTITPSELRRRWRAGEEVALLDVREEGPYSLSHPFFAVSLPLSQIELRMLDLVPRLTAPVVVYD DGEGYAARALPRIRALGYTDVAVLEGGLSAYARVGEVFRDVNVPSKAFGELVEAIRHTPSLSADEAKALIERESNLVVLD ARRFEEYRTMSIPRGVSVPGGELAFRAREIAPSPDTTIIVNCAGRTRSIIGTQSLINAGLRNKIYALRNGTIGWTLAGHK VERGNTVRFLERPQASYAAALANAKTWAERVGVRVLDAATFARYQAEAGTRTLYCLDVRTPEEYAAGHPAGFVSAPGGQL VQATDEWVGVRGARLVLFDDDGVRARMTASWLTQMGWDASVVGPDVVAPTETAPRTARRPPLPDILTAAIDVAGLAARRA ALTIVDLTRSPGYTAGHIPGAHFLLASRFASDLAKLPGDGGIVLTSIDGAEAAFALADARAATSRELLVLNGGTRAWAAA GHPLDTERPSWISSPDDVYKRPYEGTDNAAEAMQAYIDWELQLVAQLANDSVSNFHVV
Sequences:
>Translated_538_residues MTASPTSGPTATPEGFRTITPSELRRRWRAGEEVALLDVREEGPYSLSHPFFAVSLPLSQIELRMLDLVPRLTAPVVVYD DGEGYAARALPRIRALGYTDVAVLEGGLSAYARVGEVFRDVNVPSKAFGELVEAIRHTPSLSADEAKALIERESNLVVLD ARRFEEYRTMSIPRGVSVPGGELAFRAREIAPSPDTTIIVNCAGRTRSIIGTQSLINAGLRNKIYALRNGTIGWTLAGHK VERGNTVRFLERPQASYAAALANAKTWAERVGVRVLDAATFARYQAEAGTRTLYCLDVRTPEEYAAGHPAGFVSAPGGQL VQATDEWVGVRGARLVLFDDDGVRARMTASWLTQMGWDASVVGPDVVAPTETAPRTARRPPLPDILTAAIDVAGLAARRA ALTIVDLTRSPGYTAGHIPGAHFLLASRFASDLAKLPGDGGIVLTSIDGAEAAFALADARAATSRELLVLNGGTRAWAAA GHPLDTERPSWISSPDDVYKRPYEGTDNAAEAMQAYIDWELQLVAQLANDSVSNFHVV >Mature_537_residues TASPTSGPTATPEGFRTITPSELRRRWRAGEEVALLDVREEGPYSLSHPFFAVSLPLSQIELRMLDLVPRLTAPVVVYDD GEGYAARALPRIRALGYTDVAVLEGGLSAYARVGEVFRDVNVPSKAFGELVEAIRHTPSLSADEAKALIERESNLVVLDA RRFEEYRTMSIPRGVSVPGGELAFRAREIAPSPDTTIIVNCAGRTRSIIGTQSLINAGLRNKIYALRNGTIGWTLAGHKV ERGNTVRFLERPQASYAAALANAKTWAERVGVRVLDAATFARYQAEAGTRTLYCLDVRTPEEYAAGHPAGFVSAPGGQLV QATDEWVGVRGARLVLFDDDGVRARMTASWLTQMGWDASVVGPDVVAPTETAPRTARRPPLPDILTAAIDVAGLAARRAA LTIVDLTRSPGYTAGHIPGAHFLLASRFASDLAKLPGDGGIVLTSIDGAEAAFALADARAATSRELLVLNGGTRAWAAAG HPLDTERPSWISSPDDVYKRPYEGTDNAAEAMQAYIDWELQLVAQLANDSVSNFHVV
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57819; Mature: 57688
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: PS00380 RHODANESE_1 ; PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASPTSGPTATPEGFRTITPSELRRRWRAGEEVALLDVREEGPYSLSHPFFAVSLPLSQ CCCCCCCCCCCCCCCCEECCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEEECCHHH IELRMLDLVPRLTAPVVVYDDGEGYAARALPRIRALGYTDVAVLEGGLSAYARVGEVFRD HHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHH VNVPSKAFGELVEAIRHTPSLSADEAKALIERESNLVVLDARRFEEYRTMSIPRGVSVPG CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCCCCCCCC GELAFRAREIAPSPDTTIIVNCAGRTRSIIGTQSLINAGLRNKIYALRNGTIGWTLAGHK CHHEEEEHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCEEEEECCCEEEEEECCE VERGNTVRFLERPQASYAAALANAKTWAERVGVRVLDAATFARYQAEAGTRTLYCLDVRT ECCCCEEEEEECCCHHHHHHHHHHHHHHHHHCEEEEHHHHHHHHHHCCCCEEEEEEECCC PEEYAAGHPAGFVSAPGGQLVQATDEWVGVRGARLVLFDDDGVRARMTASWLTQMGWDAS CHHHHCCCCCCEEECCCCCEEEECHHHHCCCCCEEEEECCCCCEEEHHHHHHHHCCCCCE VVGPDVVAPTETAPRTARRPPLPDILTAAIDVAGLAARRAALTIVDLTRSPGYTAGHIPG ECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCC AHFLLASRFASDLAKLPGDGGIVLTSIDGAEAAFALADARAATSRELLVLNGGTRAWAAA HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCCEEEEC GHPLDTERPSWISSPDDVYKRPYEGTDNAAEAMQAYIDWELQLVAQLANDSVSNFHVV CCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEECC >Mature Secondary Structure TASPTSGPTATPEGFRTITPSELRRRWRAGEEVALLDVREEGPYSLSHPFFAVSLPLSQ CCCCCCCCCCCCCCCEECCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEEECCHHH IELRMLDLVPRLTAPVVVYDDGEGYAARALPRIRALGYTDVAVLEGGLSAYARVGEVFRD HHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHH VNVPSKAFGELVEAIRHTPSLSADEAKALIERESNLVVLDARRFEEYRTMSIPRGVSVPG CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCCCCCCCC GELAFRAREIAPSPDTTIIVNCAGRTRSIIGTQSLINAGLRNKIYALRNGTIGWTLAGHK CHHEEEEHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCEEEEECCCEEEEEECCE VERGNTVRFLERPQASYAAALANAKTWAERVGVRVLDAATFARYQAEAGTRTLYCLDVRT ECCCCEEEEEECCCHHHHHHHHHHHHHHHHHCEEEEHHHHHHHHHHCCCCEEEEEEECCC PEEYAAGHPAGFVSAPGGQLVQATDEWVGVRGARLVLFDDDGVRARMTASWLTQMGWDAS CHHHHCCCCCCEEECCCCCEEEECHHHHCCCCCEEEEECCCCCEEEHHHHHHHHCCCCCE VVGPDVVAPTETAPRTARRPPLPDILTAAIDVAGLAARRAALTIVDLTRSPGYTAGHIPG ECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCC AHFLLASRFASDLAKLPGDGGIVLTSIDGAEAAFALADARAATSRELLVLNGGTRAWAAA HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCCEEEEC GHPLDTERPSWISSPDDVYKRPYEGTDNAAEAMQAYIDWELQLVAQLANDSVSNFHVV CCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA