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The map label for this gene is csbC [H]

Identifier: 146338863

GI number: 146338863

Start: 1925600

End: 1926976

Strand: Reverse

Name: csbC [H]

Synonym: BRADO1802

Alternate gene names: 146338863

Gene position: 1926976-1925600 (Counterclockwise)

Preceding gene: 146338897

Following gene: 146338856

Centisome position: 25.84

GC content: 65.07

Gene sequence:

>1377_bases
ATGAGCGTCGCAACGATGACCGACATCGCCCCGCAGCGCACCACGATCGACAACGCCGTCCGCTATCTGATCCAGAACTA
CAGCCCCAAGGGCAATCGCGTCGGCTGGCTGATGATGGCCTCGATCCTGGTCGAGGCCTGGGATCTCTATTCGATCGCCT
TCGTGCTGATCTTCATCAAGGAGCAGTTCAATCCCGGCCCGCTGGAGCTTGGCCTCGCCGCCGCCGGCACGCAGGGCGGC
GCACTCATCGGTGCATTGCTCGGCGGCTGGCTGTCGGACAAGATCGGCCGCCGCTGGATGTTCTTGGGGACGATGACGAT
GTTCGTGGTGCTGGCCGTGGCGCAGGCCTTCGTTCCCAACGTCGCGTGGCTGATCGTCATCCGCTTCCTGCTCGGCCTGC
CGCTCGGCAGCGACATCTCGACCGGCTACACGTATATCATGGAGTCGATGGCCAAGGGCCAGCGCGAGGTGATGGGCAAT
CGCTGGCAGTTCATGTTCGCGGTCGGCGAGGTGCTGACGCTCGGCGTGATCGCGCTGTTCCTGATTGCCGAGATCAACCA
CGAGACGGTCTGGCGCGTCACCCTCGGGCTCGGCGCGGTGCCGGCGCTGATCATCCTGTTCCTGCGCCACGACGTTCCGG
AGACCGCCGTCTGGCTGGTGCAACACGGCCGCTTCCGCGAGGCCAAGGACGTGGCGCGGCAGATGTACAACGACGATCTC
CCGATGCTGCCGAACCAGGACATGGTTGTCGAAAAGCCGAGCACATGGGATTTCCTCTCCGACCTGCGCAAGGATCCGAT
CCGCTGGCGCGCGACGATCTACGGCTGGATCGCCTGCTTCGCCCAAGGCGCCGAATTCGCCACTTTCGGGTTCTATCTGC
CGGTGCTGTTCACGATGGTTGGCGTCTCCACCACGCTCGGCAACAACCTCGTCACGATGGCGCTGTTCTGTCTCGCCGCC
GTCTCCGGCTGGGTCGGGCCGCTGCTGACGCCCCGGATCGGCCATCGCGGCATCGGCATCGCCGGCTTCGCGATCGTGCT
GGTGTCACTGATCGTGGCCGCCGGCGCGCTCTACACCGGACACACCATCATCCTGCCGTTCGCCGCCGCCGCCATGCTGT
GGGGCCATTACTGGGACGCTTCCAACTGCATGACCATCCCGACCATGGTGGCGCGCCCGCGCTATCGCGGCACCGCCAGC
GGCTTCGCCTACATGTTCGTGAAGCTGCCGTCGTTCCTGGCGATCTTCCTGTTCCCCGCGCTGTTCACCGCGATCGGCCA
GGCCAATGCGACATTGTTCGTCGCGATCTTCCCGCTGGCCGGCCTGCTCGCCGCGATCTTCATCCTGCCGGAGGTGTATG
GCTACGAGGCGGATTGA

Upstream 100 bases:

>100_bases
TCAAAGCAGTCGGATACTGGAACGACGACCGATCCCCTCCGCGCGACCTTCGCCGCGGACGCGCTGCGCGCCGCCGTTCG
GCTTCGTGAAAGGACCCGCC

Downstream 100 bases:

>100_bases
GGCAGCGAAGCCGAATTACACGTTCGGCAGCAGCTTGCCCGGGTTCATCAGCCCGCGGGGATCGAGCGTACGCTTGAGCT
GACGCATCAGCTCAAGCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 458; Mature: 457

Protein sequence:

>458_residues
MSVATMTDIAPQRTTIDNAVRYLIQNYSPKGNRVGWLMMASILVEAWDLYSIAFVLIFIKEQFNPGPLELGLAAAGTQGG
ALIGALLGGWLSDKIGRRWMFLGTMTMFVVLAVAQAFVPNVAWLIVIRFLLGLPLGSDISTGYTYIMESMAKGQREVMGN
RWQFMFAVGEVLTLGVIALFLIAEINHETVWRVTLGLGAVPALIILFLRHDVPETAVWLVQHGRFREAKDVARQMYNDDL
PMLPNQDMVVEKPSTWDFLSDLRKDPIRWRATIYGWIACFAQGAEFATFGFYLPVLFTMVGVSTTLGNNLVTMALFCLAA
VSGWVGPLLTPRIGHRGIGIAGFAIVLVSLIVAAGALYTGHTIILPFAAAAMLWGHYWDASNCMTIPTMVARPRYRGTAS
GFAYMFVKLPSFLAIFLFPALFTAIGQANATLFVAIFPLAGLLAAIFILPEVYGYEAD

Sequences:

>Translated_458_residues
MSVATMTDIAPQRTTIDNAVRYLIQNYSPKGNRVGWLMMASILVEAWDLYSIAFVLIFIKEQFNPGPLELGLAAAGTQGG
ALIGALLGGWLSDKIGRRWMFLGTMTMFVVLAVAQAFVPNVAWLIVIRFLLGLPLGSDISTGYTYIMESMAKGQREVMGN
RWQFMFAVGEVLTLGVIALFLIAEINHETVWRVTLGLGAVPALIILFLRHDVPETAVWLVQHGRFREAKDVARQMYNDDL
PMLPNQDMVVEKPSTWDFLSDLRKDPIRWRATIYGWIACFAQGAEFATFGFYLPVLFTMVGVSTTLGNNLVTMALFCLAA
VSGWVGPLLTPRIGHRGIGIAGFAIVLVSLIVAAGALYTGHTIILPFAAAAMLWGHYWDASNCMTIPTMVARPRYRGTAS
GFAYMFVKLPSFLAIFLFPALFTAIGQANATLFVAIFPLAGLLAAIFILPEVYGYEAD
>Mature_457_residues
SVATMTDIAPQRTTIDNAVRYLIQNYSPKGNRVGWLMMASILVEAWDLYSIAFVLIFIKEQFNPGPLELGLAAAGTQGGA
LIGALLGGWLSDKIGRRWMFLGTMTMFVVLAVAQAFVPNVAWLIVIRFLLGLPLGSDISTGYTYIMESMAKGQREVMGNR
WQFMFAVGEVLTLGVIALFLIAEINHETVWRVTLGLGAVPALIILFLRHDVPETAVWLVQHGRFREAKDVARQMYNDDLP
MLPNQDMVVEKPSTWDFLSDLRKDPIRWRATIYGWIACFAQGAEFATFGFYLPVLFTMVGVSTTLGNNLVTMALFCLAAV
SGWVGPLLTPRIGHRGIGIAGFAIVLVSLIVAAGALYTGHTIILPFAAAAMLWGHYWDASNCMTIPTMVARPRYRGTASG
FAYMFVKLPSFLAIFLFPALFTAIGQANATLFVAIFPLAGLLAAIFILPEVYGYEAD

Specific function: Could serve either a nutritional or an osmotic protection function [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]

Homologues:

Organism=Homo sapiens, GI4506999, Length=212, Percent_Identity=29.7169811320755, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI23510410, Length=212, Percent_Identity=29.7169811320755, Blast_Score=71, Evalue=2e-12,
Organism=Escherichia coli, GI1786229, Length=420, Percent_Identity=28.5714285714286, Blast_Score=96, Evalue=6e-21,
Organism=Escherichia coli, GI1789207, Length=272, Percent_Identity=27.9411764705882, Blast_Score=89, Evalue=5e-19,
Organism=Escherichia coli, GI87082159, Length=333, Percent_Identity=27.027027027027, Blast_Score=79, Evalue=7e-16,
Organism=Escherichia coli, GI1788074, Length=304, Percent_Identity=27.6315789473684, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1789312, Length=333, Percent_Identity=24.9249249249249, Blast_Score=65, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17565976, Length=333, Percent_Identity=25.8258258258258, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17542342, Length=390, Percent_Identity=25.8974358974359, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI221330907, Length=185, Percent_Identity=27.027027027027, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24668440, Length=284, Percent_Identity=25.3521126760563, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI21357295, Length=276, Percent_Identity=24.2753623188406, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI161078056, Length=276, Percent_Identity=24.2753623188406, Blast_Score=66, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR016196
- InterPro:   IPR005828
- InterPro:   IPR003663
- InterPro:   IPR005829 [H]

Pfam domain/function: PF00083 Sugar_tr [H]

EC number: NA

Molecular weight: Translated: 50290; Mature: 50159

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1 ; PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVATMTDIAPQRTTIDNAVRYLIQNYSPKGNRVGWLMMASILVEAWDLYSIAFVLIFIK
CCCCCHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQFNPGPLELGLAAAGTQGGALIGALLGGWLSDKIGRRWMFLGTMTMFVVLAVAQAFVPN
HCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCH
VAWLIVIRFLLGLPLGSDISTGYTYIMESMAKGQREVMGNRWQFMFAVGEVLTLGVIALF
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHH
LIAEINHETVWRVTLGLGAVPALIILFLRHDVPETAVWLVQHGRFREAKDVARQMYNDDL
HHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCC
PMLPNQDMVVEKPSTWDFLSDLRKDPIRWRATIYGWIACFAQGAEFATFGFYLPVLFTMV
CCCCCCCCEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
GVSTTLGNNLVTMALFCLAAVSGWVGPLLTPRIGHRGIGIAGFAIVLVSLIVAAGALYTG
HHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
HTIILPFAAAAMLWGHYWDASNCMTIPTMVARPRYRGTASGFAYMFVKLPSFLAIFLFPA
CHHHHHHHHHHHHHHHCCCCCCCEECHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LFTAIGQANATLFVAIFPLAGLLAAIFILPEVYGYEAD
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SVATMTDIAPQRTTIDNAVRYLIQNYSPKGNRVGWLMMASILVEAWDLYSIAFVLIFIK
CCCCHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQFNPGPLELGLAAAGTQGGALIGALLGGWLSDKIGRRWMFLGTMTMFVVLAVAQAFVPN
HCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCH
VAWLIVIRFLLGLPLGSDISTGYTYIMESMAKGQREVMGNRWQFMFAVGEVLTLGVIALF
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHH
LIAEINHETVWRVTLGLGAVPALIILFLRHDVPETAVWLVQHGRFREAKDVARQMYNDDL
HHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCC
PMLPNQDMVVEKPSTWDFLSDLRKDPIRWRATIYGWIACFAQGAEFATFGFYLPVLFTMV
CCCCCCCCEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
GVSTTLGNNLVTMALFCLAAVSGWVGPLLTPRIGHRGIGIAGFAIVLVSLIVAAGALYTG
HHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
HTIILPFAAAAMLWGHYWDASNCMTIPTMVARPRYRGTASGFAYMFVKLPSFLAIFLFPA
CHHHHHHHHHHHHHHHCCCCCCCEECHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LFTAIGQANATLFVAIFPLAGLLAAIFILPEVYGYEAD
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584049; 9384377; 10376822 [H]