| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146338898
Identifier: 146338898
GI number: 146338898
Start: 1965059
End: 1965646
Strand: Reverse
Name: 146338898
Synonym: BRADO1837
Alternate gene names: NA
Gene position: 1965646-1965059 (Counterclockwise)
Preceding gene: 146338899
Following gene: 146338897
Centisome position: 26.36
GC content: 66.67
Gene sequence:
>588_bases ATGACCGAGATTGCGCGTCTGCGCGACTTCGTCGCCGAGACGGCACGGCTCGTCGTGAGCACGACGAACGAGCCCGAACT GCTCGCCGCCCTCGCACCCCGGCTGAACGACCTGGTCGCGCATGACGACTGGCTGCCTCAGGCCTATGCGGTGGCCGACG GCCACCACTACCGGCAATATCTGCTCTATGCCGACCCGCTCGAGCGCTTCTCGATCGTCAGCTTCGTCTGGGGGCCCGGC CAGGGCACGCCGGTGCACGACCACCGCGTCTGGGGTCTGGTCGGCGTATTGCGCGGGGAGGAACTCTCAGTGAGCTATGC ACGGCAGCCGGATGGCCGGCTGCAGGCGGATCCGCCGGAGCGGCTGCGGGCTGGACAAACCGCGGCAGTATCGCCAAGGA TTGGCGACATCCACGCCATCTCCAACAGTCTGGCGGACCGCTCCTCGATCAGCATCCACGTCTACGGCGGCAATATCGGC CGCATCCGCCGTGCGGTTTACGATCCGGACACCGGGGCCGCCCAGGACTTCATCTCCGGATATTCGAATGACAGCGTCCC CAACCTCTGGCCCCACAGCAACGCCTGA
Upstream 100 bases:
>100_bases GCTTTCGAACGAGGACCTGTTCTACATCGCGATGCTGGGTCCTCACGTCTGAGCCGAGCCTCGACGCTCGCCCTCCTCCA ACACACGATATGAGTTCGAC
Downstream 100 bases:
>100_bases GGGCTTCAGAACCATCACCCCGAGCGAGCTGCGTCGCCGCTGGCGCGCCGGCGAGGAGGTGGCGCTGCTCGACGTCCGCG AGGAAGGCCCCTACTCGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: Cysteine Dioxygenase Type I Protein; Cysteine Dioxygenase; Metal-Dependent Protein
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MTEIARLRDFVAETARLVVSTTNEPELLAALAPRLNDLVAHDDWLPQAYAVADGHHYRQYLLYADPLERFSIVSFVWGPG QGTPVHDHRVWGLVGVLRGEELSVSYARQPDGRLQADPPERLRAGQTAAVSPRIGDIHAISNSLADRSSISIHVYGGNIG RIRRAVYDPDTGAAQDFISGYSNDSVPNLWPHSNA
Sequences:
>Translated_195_residues MTEIARLRDFVAETARLVVSTTNEPELLAALAPRLNDLVAHDDWLPQAYAVADGHHYRQYLLYADPLERFSIVSFVWGPG QGTPVHDHRVWGLVGVLRGEELSVSYARQPDGRLQADPPERLRAGQTAAVSPRIGDIHAISNSLADRSSISIHVYGGNIG RIRRAVYDPDTGAAQDFISGYSNDSVPNLWPHSNA >Mature_194_residues TEIARLRDFVAETARLVVSTTNEPELLAALAPRLNDLVAHDDWLPQAYAVADGHHYRQYLLYADPLERFSIVSFVWGPGQ GTPVHDHRVWGLVGVLRGEELSVSYARQPDGRLQADPPERLRAGQTAAVSPRIGDIHAISNSLADRSSISIHVYGGNIGR IRRAVYDPDTGAAQDFISGYSNDSVPNLWPHSNA
Specific function: Unknown
COG id: COG5553
COG function: function code R; Predicted metal-dependent enzyme of the double-stranded beta helix superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21446; Mature: 21315
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEIARLRDFVAETARLVVSTTNEPELLAALAPRLNDLVAHDDWLPQAYAVADGHHYRQY CCHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEE LLYADPLERFSIVSFVWGPGQGTPVHDHRVWGLVGVLRGEELSVSYARQPDGRLQADPPE EEECCCHHHHEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHH RLRAGQTAAVSPRIGDIHAISNSLADRSSISIHVYGGNIGRIRRAVYDPDTGAAQDFISG HHHCCCCEECCCCCCHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCCCHHHHHHHC YSNDSVPNLWPHSNA CCCCCCCCCCCCCCC >Mature Secondary Structure TEIARLRDFVAETARLVVSTTNEPELLAALAPRLNDLVAHDDWLPQAYAVADGHHYRQY CHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEE LLYADPLERFSIVSFVWGPGQGTPVHDHRVWGLVGVLRGEELSVSYARQPDGRLQADPPE EEECCCHHHHEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHH RLRAGQTAAVSPRIGDIHAISNSLADRSSISIHVYGGNIGRIRRAVYDPDTGAAQDFISG HHHCCCCEECCCCCCHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCCCHHHHHHHC YSNDSVPNLWPHSNA CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA