| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is pps [H]
Identifier: 146338642
GI number: 146338642
Start: 1684465
End: 1686900
Strand: Reverse
Name: pps [H]
Synonym: BRADO1573
Alternate gene names: 146338642
Gene position: 1686900-1684465 (Counterclockwise)
Preceding gene: 146338644
Following gene: 146338638
Centisome position: 22.62
GC content: 67.24
Gene sequence:
>2436_bases ATGAATGCATCCGGTTATATTCGCTGGTTCAAGGACCTTCGCATCGAGGACGTCCCCGACGTCGGCGGCAAGACCGCGTC GCTCGGGGAGCTGTATTCGGCGCTGGCGGCGCAGGGCGTACGCGTGCCGAACGGCTTCGCCTTGACCGCGGCAAGCTATC GCGATGCGCTGCGCGCCGACGGCGCCGACGATGCGTTGCGTGAGCTGCTCGCCGGACTCGACAAACGCCGCATCGCCGAT CTCGCCAAGCGAGCGGCCAAGGCGCGCGCGATCGTGTTCGACGCCACCGATCGTGACGATCTCCGGCGCGAGGTGGCCAT GGCGTACAAGCAGCTCGAGCAGGAATATGGCCGCAACGTCGCGGTGGCCGTGCGCAGTTCGGCGACCGCCGAGGACCTGC CCCATGCGAGCTTCGCCGGCCAGCACGAGAGCTTCCTCAACATCAGCGGCGCCAGGCAGCTGTTCGAGACCTGCCGCCGC TGCTTCGCCTCGCTCTACACCGATCGCGCGATCTCCTACCGCATCGACAATGGCTTCGCCCACGACAAGGTCGCGCTGTC GGTGGCCGTGATGAAGATGGTGCGCTCCGATCGCGGCGCCAGCGGCGTGATGTTCTCGCTGGACACCGAGAGCGGCTTTC GCGACGTCGCCTTCATCACCGGCGTCTACGGGCTCGGCGAGACCATCGTGCAGGGCGCGGTCGATCCCGACGAGTTCTAC GTCCACAAGCCGACCTTCGCCGCCGGCTTCCGCAGCGTGCTGTCGCGGCGGCTCGGCGCCAAGAGCAAGCGTATGGTCTA TGCGAAGCCGGGCGCGCGCGGCGCCACCACGCGCATCGAGCCGACCCCGCCGGCCGAGCGCGCCAGGTTCTGTATCGACG ACTCCGACGTGCTGGAGCTGGCGCAGGCGACGATCACCGTCGAGCAGCACTACTCGCAGAAGGCCGGCCGGCCGACGCCG ATGGACATCGAATGGGCCAAGGACGGCCGCGACGGCGCGCTCTACATCATCCAGGCCCGGCCCGAGACGGTGGCCTCGCA GCGGCGGCCGGAGTCGGTCGAGACCTATGTGCTGAAAAAGGCCGGCAAGCCGCTCGCGACCGGCCGCGCCGTCGGCGAGA AGATCGCCGCAGGCAAGGTCCGCCTGATCAGAACGGCAACGGACCTGCGCGCGTTCAAGCCCGGCGAGGTGCTAGTGGCC ACCTCGACCAGCCCGGATTGGGAGCCCGTCATGAAGACCGCGGCGGCGATCGTCACGGATCATGGCGGCCGGACCTGCCA TGCCGCGATCATCGCGCGCGAACTCGGCGTGCCCGCGGTGGTCGGCACCGAGGATTTCAGCAAGCGCGCCAGGACGGGCG CGAGCGTCACCGTGTGCTGCGCCGAGGGCGATGCCGGACATGTCTATGACGGCGCCCTGCCGTTCGACGTCCAGCGTCTG GCGATCGACAAGCTCGACAAGCCGCACACCCACATCATGGTCAATCTCGGCAATCCCGAGCTCGCCTTCAAGACCGCACT CTTGCCGAACGACGGCGTCGGCCTCGCACGCATGGAGTTCATCATCAACCAGTCGATCGGCATTCATCCGATGGCATTGG CTGCGCCGAACAAGGTGACCGCGCCAAAGGACCGCGCGACGATCAAGCAACTGACCGCCCGCTACAGGAAGCCCGCCGAC TTCTTCGTGGAGCAGCTGTCGGAAGGGGTCGGCACCATCGCGGCCGCCTTCTATCCGCGCCCGGTCATCATCAGGCTGTC GGACTTCAAGACCAACGAATATGCCAGCCTGATTGGCGGCGCCGACTTCGAGCCCAGGGAGGAGAACCCGATGCTCGGCT TCCGCGGCGCCTCGCGCTATGCGCATCCGGCCTATGCCGCCGGCTTCGCGCTGGAATGCGCCGCCCTGAAGCGCGTCCGC GACGTCATGGGCCTCGCCAATCTGAAGATCATGATCCCGTTCTGCCGCCGCGTTGCGGAGGCGGAGAAGGTGATCGCGGC GATGGCCGGGCACGGGCTCGTCCGCGGCGAGCACGGATTGGAGATCTACATGATGTGCGAGATCCCCAACAACGTCATCC TGATCGACGAGTTCGCGAAACATTTCGACGGCTTCTCGATCGGCTCCAACGACCTGACCCAGCTCACGCTCGGCGTCGAC CGCGATTCCGACATCGTCGCGTTCGATTTCGACGAGCGCGATCCCGGTCTCCTGACCATGCTCAAGCTCGCGGTGGAGGG CGCGCATCGCAACCACCGCCATGTCGGCATCTGCGGCGAGGCGCCGGCCAACTATCCGGAGGTGGCACGCTATCTGGCGA GCCTCGGCATCGATTCGATCAGCGTCAACCCGGCCAGCGTCATGCGGACGATGGAGATCGTGCGCGTCGCGGAGCGGGAC GCCGCAGCCAGCGTGCCGCAGGCGCTGGCGAGCTAG
Upstream 100 bases:
>100_bases ATCTAAGGAGCCACGCACATGCCCCGCTTGATCTTGCGCAAGCCGGCTGCCGTCCGGCGCGGCAAACTCGGCTCTCGCGC TGCGATGCGGGAGACACGCC
Downstream 100 bases:
>100_bases TCCAGATCGTGGTCCCTGCCGGACGTGGCGCCGTGCTGGACCAGCGCGATGGCCCGTTCGGCGTCGGCGATCAGTTGCCG GATATGGCGCGACTGCTCGG
Product: phosphoenolpyruvate synthase
Products: NA
Alternate protein names: PEP synthase; Pyruvate, water dikinase [H]
Number of amino acids: Translated: 811; Mature: 811
Protein sequence:
>811_residues MNASGYIRWFKDLRIEDVPDVGGKTASLGELYSALAAQGVRVPNGFALTAASYRDALRADGADDALRELLAGLDKRRIAD LAKRAAKARAIVFDATDRDDLRREVAMAYKQLEQEYGRNVAVAVRSSATAEDLPHASFAGQHESFLNISGARQLFETCRR CFASLYTDRAISYRIDNGFAHDKVALSVAVMKMVRSDRGASGVMFSLDTESGFRDVAFITGVYGLGETIVQGAVDPDEFY VHKPTFAAGFRSVLSRRLGAKSKRMVYAKPGARGATTRIEPTPPAERARFCIDDSDVLELAQATITVEQHYSQKAGRPTP MDIEWAKDGRDGALYIIQARPETVASQRRPESVETYVLKKAGKPLATGRAVGEKIAAGKVRLIRTATDLRAFKPGEVLVA TSTSPDWEPVMKTAAAIVTDHGGRTCHAAIIARELGVPAVVGTEDFSKRARTGASVTVCCAEGDAGHVYDGALPFDVQRL AIDKLDKPHTHIMVNLGNPELAFKTALLPNDGVGLARMEFIINQSIGIHPMALAAPNKVTAPKDRATIKQLTARYRKPAD FFVEQLSEGVGTIAAAFYPRPVIIRLSDFKTNEYASLIGGADFEPREENPMLGFRGASRYAHPAYAAGFALECAALKRVR DVMGLANLKIMIPFCRRVAEAEKVIAAMAGHGLVRGEHGLEIYMMCEIPNNVILIDEFAKHFDGFSIGSNDLTQLTLGVD RDSDIVAFDFDERDPGLLTMLKLAVEGAHRNHRHVGICGEAPANYPEVARYLASLGIDSISVNPASVMRTMEIVRVAERD AAASVPQALAS
Sequences:
>Translated_811_residues MNASGYIRWFKDLRIEDVPDVGGKTASLGELYSALAAQGVRVPNGFALTAASYRDALRADGADDALRELLAGLDKRRIAD LAKRAAKARAIVFDATDRDDLRREVAMAYKQLEQEYGRNVAVAVRSSATAEDLPHASFAGQHESFLNISGARQLFETCRR CFASLYTDRAISYRIDNGFAHDKVALSVAVMKMVRSDRGASGVMFSLDTESGFRDVAFITGVYGLGETIVQGAVDPDEFY VHKPTFAAGFRSVLSRRLGAKSKRMVYAKPGARGATTRIEPTPPAERARFCIDDSDVLELAQATITVEQHYSQKAGRPTP MDIEWAKDGRDGALYIIQARPETVASQRRPESVETYVLKKAGKPLATGRAVGEKIAAGKVRLIRTATDLRAFKPGEVLVA TSTSPDWEPVMKTAAAIVTDHGGRTCHAAIIARELGVPAVVGTEDFSKRARTGASVTVCCAEGDAGHVYDGALPFDVQRL AIDKLDKPHTHIMVNLGNPELAFKTALLPNDGVGLARMEFIINQSIGIHPMALAAPNKVTAPKDRATIKQLTARYRKPAD FFVEQLSEGVGTIAAAFYPRPVIIRLSDFKTNEYASLIGGADFEPREENPMLGFRGASRYAHPAYAAGFALECAALKRVR DVMGLANLKIMIPFCRRVAEAEKVIAAMAGHGLVRGEHGLEIYMMCEIPNNVILIDEFAKHFDGFSIGSNDLTQLTLGVD RDSDIVAFDFDERDPGLLTMLKLAVEGAHRNHRHVGICGEAPANYPEVARYLASLGIDSISVNPASVMRTMEIVRVAERD AAASVPQALAS >Mature_811_residues MNASGYIRWFKDLRIEDVPDVGGKTASLGELYSALAAQGVRVPNGFALTAASYRDALRADGADDALRELLAGLDKRRIAD LAKRAAKARAIVFDATDRDDLRREVAMAYKQLEQEYGRNVAVAVRSSATAEDLPHASFAGQHESFLNISGARQLFETCRR CFASLYTDRAISYRIDNGFAHDKVALSVAVMKMVRSDRGASGVMFSLDTESGFRDVAFITGVYGLGETIVQGAVDPDEFY VHKPTFAAGFRSVLSRRLGAKSKRMVYAKPGARGATTRIEPTPPAERARFCIDDSDVLELAQATITVEQHYSQKAGRPTP MDIEWAKDGRDGALYIIQARPETVASQRRPESVETYVLKKAGKPLATGRAVGEKIAAGKVRLIRTATDLRAFKPGEVLVA TSTSPDWEPVMKTAAAIVTDHGGRTCHAAIIARELGVPAVVGTEDFSKRARTGASVTVCCAEGDAGHVYDGALPFDVQRL AIDKLDKPHTHIMVNLGNPELAFKTALLPNDGVGLARMEFIINQSIGIHPMALAAPNKVTAPKDRATIKQLTARYRKPAD FFVEQLSEGVGTIAAAFYPRPVIIRLSDFKTNEYASLIGGADFEPREENPMLGFRGASRYAHPAYAAGFALECAALKRVR DVMGLANLKIMIPFCRRVAEAEKVIAAMAGHGLVRGEHGLEIYMMCEIPNNVILIDEFAKHFDGFSIGSNDLTQLTLGVD RDSDIVAFDFDERDPGLLTMLKLAVEGAHRNHRHVGICGEAPANYPEVARYLASLGIDSISVNPASVMRTMEIVRVAERD AAASVPQALAS
Specific function: Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate [H]
COG id: COG0574
COG function: function code G; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEP-utilizing enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1787994, Length=788, Percent_Identity=50.3807106598985, Blast_Score=805, Evalue=0.0, Organism=Escherichia coli, GI1788756, Length=457, Percent_Identity=25.382932166302, Blast_Score=107, Evalue=3e-24, Organism=Escherichia coli, GI48994992, Length=190, Percent_Identity=33.1578947368421, Blast_Score=97, Evalue=5e-21, Organism=Escherichia coli, GI1788726, Length=191, Percent_Identity=32.9842931937173, Blast_Score=96, Evalue=1e-20, Organism=Escherichia coli, GI1789193, Length=423, Percent_Identity=26.0047281323877, Blast_Score=85, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17564524, Length=320, Percent_Identity=23.4375, Blast_Score=71, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR008279 - InterPro: IPR006319 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR002192 - InterPro: IPR015813 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF02896 PEP-utilizers_C; PF01326 PPDK_N [H]
EC number: =2.7.9.2 [H]
Molecular weight: Translated: 87985; Mature: 87985
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: PS00370 PEP_ENZYMES_PHOS_SITE ; PS00742 PEP_ENZYMES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNASGYIRWFKDLRIEDVPDVGGKTASLGELYSALAAQGVRVPNGFALTAASYRDALRAD CCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHCC GADDALRELLAGLDKRRIADLAKRAAKARAIVFDATDRDDLRREVAMAYKQLEQEYGRNV CHHHHHHHHHHCCCHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCEE AVAVRSSATAEDLPHASFAGQHESFLNISGARQLFETCRRCFASLYTDRAISYRIDNGFA EEEEECCCCHHHCCCCCCCCCCHHHEEHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCC HDKVALSVAVMKMVRSDRGASGVMFSLDTESGFRDVAFITGVYGLGETIVQGAVDPDEFY CHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEE VHKPTFAAGFRSVLSRRLGAKSKRMVYAKPGARGATTRIEPTPPAERARFCIDDSDVLEL EECCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHCEEECCCHHHHHH AQATITVEQHYSQKAGRPTPMDIEWAKDGRDGALYIIQARPETVASQRRPESVETYVLKK HHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCEEEEEECCCHHHHHHCCCCHHHHHHHHH AGKPLATGRAVGEKIAAGKVRLIRTATDLRAFKPGEVLVATSTSPDWEPVMKTAAAIVTD CCCCCHHHHHHHHHHCCCCEEEEEEHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHCC HGGRTCHAAIIARELGVPAVVGTEDFSKRARTGASVTVCCAEGDAGHVYDGALPFDVQRL CCCCCHHHHHHHHHCCCCEEECCHHHHHHHCCCCCEEEEEECCCCCCEECCCCCCHHHHH AIDKLDKPHTHIMVNLGNPELAFKTALLPNDGVGLARMEFIINQSIGIHPMALAAPNKVT HHHCCCCCCEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCC APKDRATIKQLTARYRKPADFFVEQLSEGVGTIAAAFYPRPVIIRLSDFKTNEYASLIGG CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHCC ADFEPREENPMLGFRGASRYAHPAYAAGFALECAALKRVRDVMGLANLKIMIPFCRRVAE CCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHH AEKVIAAMAGHGLVRGEHGLEIYMMCEIPNNVILIDEFAKHFDGFSIGSNDLTQLTLGVD HHHHHHHHHCCCEEECCCCCEEEEEEECCCCEEEEEHHHHHCCCCCCCCCCCEEEEEECC RDSDIVAFDFDERDPGLLTMLKLAVEGAHRNHRHVGICGEAPANYPEVARYLASLGIDSI CCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCC SVNPASVMRTMEIVRVAERDAAASVPQALAS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNASGYIRWFKDLRIEDVPDVGGKTASLGELYSALAAQGVRVPNGFALTAASYRDALRAD CCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHCC GADDALRELLAGLDKRRIADLAKRAAKARAIVFDATDRDDLRREVAMAYKQLEQEYGRNV CHHHHHHHHHHCCCHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCEE AVAVRSSATAEDLPHASFAGQHESFLNISGARQLFETCRRCFASLYTDRAISYRIDNGFA EEEEECCCCHHHCCCCCCCCCCHHHEEHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCC HDKVALSVAVMKMVRSDRGASGVMFSLDTESGFRDVAFITGVYGLGETIVQGAVDPDEFY CHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEE VHKPTFAAGFRSVLSRRLGAKSKRMVYAKPGARGATTRIEPTPPAERARFCIDDSDVLEL EECCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHCEEECCCHHHHHH AQATITVEQHYSQKAGRPTPMDIEWAKDGRDGALYIIQARPETVASQRRPESVETYVLKK HHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCEEEEEECCCHHHHHHCCCCHHHHHHHHH AGKPLATGRAVGEKIAAGKVRLIRTATDLRAFKPGEVLVATSTSPDWEPVMKTAAAIVTD CCCCCHHHHHHHHHHCCCCEEEEEEHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHCC HGGRTCHAAIIARELGVPAVVGTEDFSKRARTGASVTVCCAEGDAGHVYDGALPFDVQRL CCCCCHHHHHHHHHCCCCEEECCHHHHHHHCCCCCEEEEEECCCCCCEECCCCCCHHHHH AIDKLDKPHTHIMVNLGNPELAFKTALLPNDGVGLARMEFIINQSIGIHPMALAAPNKVT HHHCCCCCCEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCC APKDRATIKQLTARYRKPADFFVEQLSEGVGTIAAAFYPRPVIIRLSDFKTNEYASLIGG CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHCC ADFEPREENPMLGFRGASRYAHPAYAAGFALECAALKRVRDVMGLANLKIMIPFCRRVAE CCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHH AEKVIAAMAGHGLVRGEHGLEIYMMCEIPNNVILIDEFAKHFDGFSIGSNDLTQLTLGVD HHHHHHHHHCCCEEECCCCCEEEEEEECCCCEEEEEHHHHHCCCCCCCCCCCEEEEEECC RDSDIVAFDFDERDPGLLTMLKLAVEGAHRNHRHVGICGEAPANYPEVARYLASLGIDSI CCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCC SVNPASVMRTMEIVRVAERDAAASVPQALAS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]