Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146338626
Identifier: 146338626
GI number: 146338626
Start: 1662896
End: 1663603
Strand: Reverse
Name: 146338626
Synonym: BRADO1554
Alternate gene names: NA
Gene position: 1663603-1662896 (Counterclockwise)
Preceding gene: 146338628
Following gene: 146338618
Centisome position: 22.31
GC content: 64.69
Gene sequence:
>708_bases GTGGCGAGCTATCCCATCGACGATACCAACCGGGTCAAGCGGCGGCATCAGCGCGCGCACTACGACCATGCCACGGTGCA CGCACTGCTGGACTCGGCCGCCCTTTGCCACGTGTCCTACGTCATCGACGGCCAGCCTTACTGCACGCCCACACTGTATT GGCGCGAAGGCTCAACATTGTATTGGCATGGATCGAGCGCCAGCCGGATGCTGCGCAGCCTCTCCGAGGGACAACCGGCC TGCCTGACCGTCACGCATCTCGACAGCCTGGTGTTGGCGCGCAGCGCCTTTCATCACTCCGCCGATTATCGCTCGGTGAT GGCGTTCGGCCATGCGCGACTGATCGAGGATCAGGATGAGAAGGCTCGCGCGCTGACAATGATGGTCGACCGCCTGTTTC CGGGCCGCACCGCGAGCCTGCGCCCGACCACCGATCAGGAGCTCAAGGCCACGTCGGTGGTCACCATGGAAATCGAGAAG GCATCAGCCAAGATCCGCGCCGCCGGCGTCATCGACGACGAGGAGGACTATGCGCTTCCGATCTACGCCGAGCGGATTCC GCTGCGCACCGTAATCGAGCCGCCGGAGCCCGACGGCCGATTGCTGGCGGGTGTCACGCGTCCCGAGACACTCTCGGTTT TCCGAACTGGGCAGCGGCTGGATGAGGCGCTGACGGAGACGTATGCGACGAGCTATCCGGCGGGGTAG
Upstream 100 bases:
>100_bases GAAGTGGTTGCCTTATTTTGCATCGAAGTGGCACTCCCGGCAACCACTTTGCCATGGCATGACGTCGCCTGCAAACAGGA GACAAGCGATGACCGAGCGG
Downstream 100 bases:
>100_bases CTCTGTTGGAGATGCCCAGCAAATCCCTCGACAATCACTGCCGTCGTCCCGGCGAAAGCCGGGACCCATAACCACAGGGA GTGGTTTGAGGCAGCCTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MASYPIDDTNRVKRRHQRAHYDHATVHALLDSAALCHVSYVIDGQPYCTPTLYWREGSTLYWHGSSASRMLRSLSEGQPA CLTVTHLDSLVLARSAFHHSADYRSVMAFGHARLIEDQDEKARALTMMVDRLFPGRTASLRPTTDQELKATSVVTMEIEK ASAKIRAAGVIDDEEDYALPIYAERIPLRTVIEPPEPDGRLLAGVTRPETLSVFRTGQRLDEALTETYATSYPAG
Sequences:
>Translated_235_residues MASYPIDDTNRVKRRHQRAHYDHATVHALLDSAALCHVSYVIDGQPYCTPTLYWREGSTLYWHGSSASRMLRSLSEGQPA CLTVTHLDSLVLARSAFHHSADYRSVMAFGHARLIEDQDEKARALTMMVDRLFPGRTASLRPTTDQELKATSVVTMEIEK ASAKIRAAGVIDDEEDYALPIYAERIPLRTVIEPPEPDGRLLAGVTRPETLSVFRTGQRLDEALTETYATSYPAG >Mature_234_residues ASYPIDDTNRVKRRHQRAHYDHATVHALLDSAALCHVSYVIDGQPYCTPTLYWREGSTLYWHGSSASRMLRSLSEGQPAC LTVTHLDSLVLARSAFHHSADYRSVMAFGHARLIEDQDEKARALTMMVDRLFPGRTASLRPTTDQELKATSVVTMEIEKA SAKIRAAGVIDDEEDYALPIYAERIPLRTVIEPPEPDGRLLAGVTRPETLSVFRTGQRLDEALTETYATSYPAG
Specific function: Unknown
COG id: COG3467
COG function: function code R; Predicted flavin-nucleotide-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26232; Mature: 26101
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASYPIDDTNRVKRRHQRAHYDHATVHALLDSAALCHVSYVIDGQPYCTPTLYWREGSTL CCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEEEECCCCCCCCEEEEECCCEE YWHGSSASRMLRSLSEGQPACLTVTHLDSLVLARSAFHHSADYRSVMAFGHARLIEDQDE EEECCCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCH KARALTMMVDRLFPGRTASLRPTTDQELKATSVVTMEIEKASAKIRAAGVIDDEEDYALP HHHHHHHHHHHHCCCCCCCCCCCCCCHHEEEEEEEEEEECCCCEEEEEECCCCCCCCEEE IYAERIPLRTVIEPPEPDGRLLAGVTRPETLSVFRTGQRLDEALTETYATSYPAG EECCCCCCEEECCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure ASYPIDDTNRVKRRHQRAHYDHATVHALLDSAALCHVSYVIDGQPYCTPTLYWREGSTL CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEEEECCCCCCCCEEEEECCCEE YWHGSSASRMLRSLSEGQPACLTVTHLDSLVLARSAFHHSADYRSVMAFGHARLIEDQDE EEECCCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCH KARALTMMVDRLFPGRTASLRPTTDQELKATSVVTMEIEKASAKIRAAGVIDDEEDYALP HHHHHHHHHHHHCCCCCCCCCCCCCCHHEEEEEEEEEEECCCCEEEEEECCCCCCCCEEE IYAERIPLRTVIEPPEPDGRLLAGVTRPETLSVFRTGQRLDEALTETYATSYPAG EECCCCCCEEECCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA