Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146338628
Identifier: 146338628
GI number: 146338628
Start: 1665129
End: 1666433
Strand: Reverse
Name: 146338628
Synonym: BRADO1556
Alternate gene names: NA
Gene position: 1666433-1665129 (Counterclockwise)
Preceding gene: 146338629
Following gene: 146338626
Centisome position: 22.35
GC content: 66.21
Gene sequence:
>1305_bases GTGAAGGCCGCCAGCGGGCTGCGCGTGCGCATGTACCGCATCGGGTTCGGCGACTTCTTCCTGCTGAGCGTTCCAGCGTC GGCCGGCATCAGCCACATCCTGATCGACTGCGGGGTTCACGCCAAAGACCTCGGCAGCATGCGCGCGGCCGTCACCCAGA TGGCGAAAGACTGCGGCAACCGGCTTGCGCTGGTGATCATGACGCATCGCCATGCCGATCACATCTCCGGCTTCGGCAGC TGCGCCGACATCTTTGCTCAGATCGAGGTCGAGCGGGTTTGGATGCCCTGGTTCGAGAACCCCGCAAATCCGAAGGCCGC AGCGTTTCAGGCCAGCCTCGTCGCCATGGCCGGCGACCTCGGCCGGCAATTCCGGGCGCGGCTGGCGGCCGGGCCCGATC CCGCGGCCGAGCAGATGCTGAGCATGGCGGAGAACATCACGGGCGGCCTCGGGGTTGCGGGTATTGCCGCCAACCAGAAG GCGCTCGATGTGCTGCATGGCGGCTTCAAGGGGACGCAGCCGGCGCATGACTACTACAAGGCCGGCGATCAGCCGGTGCT GCCCCCCGATCTCATGGCGGCGGGTCTCACCGCGGAGATTCTCGGCCCTCCGATCGACGACGCCCTGATTGGTCAGATGA CCAACAAGAATCAGCAATATCTGGCGGGGGCGACCGAGAGCAGCGATTCGCCGGACCGGCTGAAGCCGTTCGGGAGGGCC TTCTGCGGCAAGCGCGAGGACTACGACGACAAGGCCTTTGCGCCCTATGGCTATGACCGCATGCTGCGCATGCTCCAGGG GGCGCAGCCCGACGTGCTGGCCGCCCAGGCCCAGGCCGCCGACAAGACGCTGAACAATCAGAGCCTCGTCATCCTGTTCT CCTTCGGCGGCAAGACCCTCCTGTTCGCCGGCGATGCGCAATGGGGCAATTGGGAGAACTTCCTGTATGGCGGGGCCTAT GGCACGCCGGGTCACACCCAGCTCACCACCAAGGCGCAGGAGATCCTGGGCAAGATCGACTTCTACAAGGTCGGTCATCA CGGCAGCGCCAACGCGACGCCGAAGGATGCGGTGAAGGCGATGCGGATCGGCTGCGTGGGCATGTGCTCGACCCAGGAGC ATGCCTACAACGAGGTGCCGCGCGAACCGCTTCTCGACGCCTTGCGCCAGCGCATGAACGACCAGCTTGCGCGCAGCGAC CAGGTCGCGGCCGGCGCGGAGGCTCCGGCAAATCCGCAAGCGGGCCCGCTGCCGAAGGCGTTCAGCGCCCCGCAGCAGCA GCTCTTCATCGACTACATCTTCTGA
Upstream 100 bases:
>100_bases GTCCAGCAACCCGCGGCCGCACAAGCCTGCCGGCCGAGCCGGAGCAACGCGCAAACGATCCGCGCCGGCAACGACCGTCG CTCCCTCGCCTGCTCTCCCC
Downstream 100 bases:
>100_bases CCTCGCGGAGAGCTCGATTCCCGCAGCACCTCCTGCGTCGCGCGCCCGAGGCGCCGCGCGGCGTCGGAGAGATCCTTGGC GGCAAAGCCCGAATAGCCGA
Product: putative metallo-hydrolase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues MKAASGLRVRMYRIGFGDFFLLSVPASAGISHILIDCGVHAKDLGSMRAAVTQMAKDCGNRLALVIMTHRHADHISGFGS CADIFAQIEVERVWMPWFENPANPKAAAFQASLVAMAGDLGRQFRARLAAGPDPAAEQMLSMAENITGGLGVAGIAANQK ALDVLHGGFKGTQPAHDYYKAGDQPVLPPDLMAAGLTAEILGPPIDDALIGQMTNKNQQYLAGATESSDSPDRLKPFGRA FCGKREDYDDKAFAPYGYDRMLRMLQGAQPDVLAAQAQAADKTLNNQSLVILFSFGGKTLLFAGDAQWGNWENFLYGGAY GTPGHTQLTTKAQEILGKIDFYKVGHHGSANATPKDAVKAMRIGCVGMCSTQEHAYNEVPREPLLDALRQRMNDQLARSD QVAAGAEAPANPQAGPLPKAFSAPQQQLFIDYIF
Sequences:
>Translated_434_residues MKAASGLRVRMYRIGFGDFFLLSVPASAGISHILIDCGVHAKDLGSMRAAVTQMAKDCGNRLALVIMTHRHADHISGFGS CADIFAQIEVERVWMPWFENPANPKAAAFQASLVAMAGDLGRQFRARLAAGPDPAAEQMLSMAENITGGLGVAGIAANQK ALDVLHGGFKGTQPAHDYYKAGDQPVLPPDLMAAGLTAEILGPPIDDALIGQMTNKNQQYLAGATESSDSPDRLKPFGRA FCGKREDYDDKAFAPYGYDRMLRMLQGAQPDVLAAQAQAADKTLNNQSLVILFSFGGKTLLFAGDAQWGNWENFLYGGAY GTPGHTQLTTKAQEILGKIDFYKVGHHGSANATPKDAVKAMRIGCVGMCSTQEHAYNEVPREPLLDALRQRMNDQLARSD QVAAGAEAPANPQAGPLPKAFSAPQQQLFIDYIF >Mature_434_residues MKAASGLRVRMYRIGFGDFFLLSVPASAGISHILIDCGVHAKDLGSMRAAVTQMAKDCGNRLALVIMTHRHADHISGFGS CADIFAQIEVERVWMPWFENPANPKAAAFQASLVAMAGDLGRQFRARLAAGPDPAAEQMLSMAENITGGLGVAGIAANQK ALDVLHGGFKGTQPAHDYYKAGDQPVLPPDLMAAGLTAEILGPPIDDALIGQMTNKNQQYLAGATESSDSPDRLKPFGRA FCGKREDYDDKAFAPYGYDRMLRMLQGAQPDVLAAQAQAADKTLNNQSLVILFSFGGKTLLFAGDAQWGNWENFLYGGAY GTPGHTQLTTKAQEILGKIDFYKVGHHGSANATPKDAVKAMRIGCVGMCSTQEHAYNEVPREPLLDALRQRMNDQLARSD QVAAGAEAPANPQAGPLPKAFSAPQQQLFIDYIF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46587; Mature: 46587
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAASGLRVRMYRIGFGDFFLLSVPASAGISHILIDCGVHAKDLGSMRAAVTQMAKDCGN CCCCCCCEEEEEEECCCCEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCC RLALVIMTHRHADHISGFGSCADIFAQIEVERVWMPWFENPANPKAAAFQASLVAMAGDL CEEEEEEECCCHHHHCCCHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHH GRQFRARLAAGPDPAAEQMLSMAENITGGLGVAGIAANQKALDVLHGGFKGTQPAHDYYK HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHCCCCCCCCCHHHHH AGDQPVLPPDLMAAGLTAEILGPPIDDALIGQMTNKNQQYLAGATESSDSPDRLKPFGRA CCCCCCCCHHHHHHCCHHHHCCCCCCHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHH FCGKREDYDDKAFAPYGYDRMLRMLQGAQPDVLAAQAQAADKTLNNQSLVILFSFGGKTL HCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCEE LFAGDAQWGNWENFLYGGAYGTPGHTQLTTKAQEILGKIDFYKVGHHGSANATPKDAVKA EEECCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHH MRIGCVGMCSTQEHAYNEVPREPLLDALRQRMNDQLARSDQVAAGAEAPANPQAGPLPKA HHHCCEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH FSAPQQQLFIDYIF HCCCHHHHEEEECC >Mature Secondary Structure MKAASGLRVRMYRIGFGDFFLLSVPASAGISHILIDCGVHAKDLGSMRAAVTQMAKDCGN CCCCCCCEEEEEEECCCCEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCC RLALVIMTHRHADHISGFGSCADIFAQIEVERVWMPWFENPANPKAAAFQASLVAMAGDL CEEEEEEECCCHHHHCCCHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHH GRQFRARLAAGPDPAAEQMLSMAENITGGLGVAGIAANQKALDVLHGGFKGTQPAHDYYK HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHCCCCCCCCCHHHHH AGDQPVLPPDLMAAGLTAEILGPPIDDALIGQMTNKNQQYLAGATESSDSPDRLKPFGRA CCCCCCCCHHHHHHCCHHHHCCCCCCHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHH FCGKREDYDDKAFAPYGYDRMLRMLQGAQPDVLAAQAQAADKTLNNQSLVILFSFGGKTL HCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCEE LFAGDAQWGNWENFLYGGAYGTPGHTQLTTKAQEILGKIDFYKVGHHGSANATPKDAVKA EEECCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHH MRIGCVGMCSTQEHAYNEVPREPLLDALRQRMNDQLARSDQVAAGAEAPANPQAGPLPKA HHHCCEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH FSAPQQQLFIDYIF HCCCHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA