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The map label for this gene is nudC [H]

Identifier: 146337876

GI number: 146337876

Start: 806728

End: 807675

Strand: Reverse

Name: nudC [H]

Synonym: BRADO0761

Alternate gene names: 146337876

Gene position: 807675-806728 (Counterclockwise)

Preceding gene: 146337877

Following gene: 146337875

Centisome position: 10.83

GC content: 66.14

Gene sequence:

>948_bases
ATGTCGCCATTCGACTTGTTTCCATTGGGCAAGCCGGCCTTCGTCGGCCATCCGATCGAGCGCGCCGCCCATCTGCGCTT
TCATGACGACAAGCTGCTCGCCTTCGAGGGCAAGCCTTCGACCCGCGCCTATGTCGTGCATCGCGATTCGCTGGTGCTGA
AGCGCGACGGCGACCAGTTGCGTCCGCTGCTGTCGATCGATGAGGCGCTCGGCTTTGGCGCCAATCCCGGCACGATCTTC
CTCGGCCTGCAGGACGGCGCGGCCGTGTTCGGCATGGGCATCTCGCCAGCGGCCGTCGAGAAGCTCGCCGGCCGCGAGGA
TGTATCGGTCACCGAGCTGCGCGGCTTGGCGATGCAGGGCGCGATTCCTGTCGAGCAACTGGCGACGATCGCCATGGCCA
AGTCGATGGTGTCCTGGCATCAGCGCCACGGCTTCTGTGCCAATTGCGGCACCAAGACCGCGATGCGCGAGGGCGGCTGG
AAGCGCGAATGCCCGAATTGCAAGACCGAGCATTTCCCGCGCACCGACCCGGTGGTGATCTCGCTGGTCGCCTCCGGCGA
CAAGTGCCTGCTCGGCCGGCAGAAGCAGTTTCCGGCGGGCATGTATTCCTGTCTCGCGGGTTTCGTCGAGGCCGCCGAGA
CGATCGAGGACGCCGTCCGCCGCGAGGTGTTCGAGGAGTCCGGCATCCGCTGCACCGACGTGACCTACTACATGACCCAG
CCCTGGCCCTATCCGTCCTCGCTGATGATCGGCTGCAGCGCGCGGGCGCTCAACGAGGACATCGTCATCGACCGCACCGA
ACTCGAGGACGTCCGCTGGTTCAGCCGCGACGAGGCCCAGCTGATGCTGCAGCGGCAGCATCCCGACGGCCTGGCGGGCC
CGCATCCGTTCGCAATTGCGCATCATCTGGTCGGCCGCTGGCTGCTGATGCAGACTAGCGGTAGCTGA

Upstream 100 bases:

>100_bases
GCGCCCGGTCTGGGGCGTCGCAACCCCTGTGCCACACGACGCGCAGGAGGTTGAGAGTTTCATCAGCGCTGTCAGGCGCA
AGATCTGGCTAGGGTGAGAG

Downstream 100 bases:

>100_bases
AGACCGCATTCGAGGCGCCTGACGTGGCCTGAACGGCCGATCCTTGCCTTGGAACGATTTTCTCTATATGAGGGTTTCTC
GACCTTCATATGGAACAAAT

Product: putative mutT/Nudix hydrolase family protein NADH pyrophosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MSPFDLFPLGKPAFVGHPIERAAHLRFHDDKLLAFEGKPSTRAYVVHRDSLVLKRDGDQLRPLLSIDEALGFGANPGTIF
LGLQDGAAVFGMGISPAAVEKLAGREDVSVTELRGLAMQGAIPVEQLATIAMAKSMVSWHQRHGFCANCGTKTAMREGGW
KRECPNCKTEHFPRTDPVVISLVASGDKCLLGRQKQFPAGMYSCLAGFVEAAETIEDAVRREVFEESGIRCTDVTYYMTQ
PWPYPSSLMIGCSARALNEDIVIDRTELEDVRWFSRDEAQLMLQRQHPDGLAGPHPFAIAHHLVGRWLLMQTSGS

Sequences:

>Translated_315_residues
MSPFDLFPLGKPAFVGHPIERAAHLRFHDDKLLAFEGKPSTRAYVVHRDSLVLKRDGDQLRPLLSIDEALGFGANPGTIF
LGLQDGAAVFGMGISPAAVEKLAGREDVSVTELRGLAMQGAIPVEQLATIAMAKSMVSWHQRHGFCANCGTKTAMREGGW
KRECPNCKTEHFPRTDPVVISLVASGDKCLLGRQKQFPAGMYSCLAGFVEAAETIEDAVRREVFEESGIRCTDVTYYMTQ
PWPYPSSLMIGCSARALNEDIVIDRTELEDVRWFSRDEAQLMLQRQHPDGLAGPHPFAIAHHLVGRWLLMQTSGS
>Mature_314_residues
SPFDLFPLGKPAFVGHPIERAAHLRFHDDKLLAFEGKPSTRAYVVHRDSLVLKRDGDQLRPLLSIDEALGFGANPGTIFL
GLQDGAAVFGMGISPAAVEKLAGREDVSVTELRGLAMQGAIPVEQLATIAMAKSMVSWHQRHGFCANCGTKTAMREGGWK
RECPNCKTEHFPRTDPVVISLVASGDKCLLGRQKQFPAGMYSCLAGFVEAAETIEDAVRREVFEESGIRCTDVTYYMTQP
WPYPSSLMIGCSARALNEDIVIDRTELEDVRWFSRDEAQLMLQRQHPDGLAGPHPFAIAHHLVGRWLLMQTSGS

Specific function: Unknown

COG id: COG2816

COG function: function code L; NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI13899267, Length=236, Percent_Identity=44.0677966101695, Blast_Score=202, Evalue=3e-52,
Organism=Homo sapiens, GI50593112, Length=246, Percent_Identity=36.9918699186992, Blast_Score=159, Evalue=5e-39,
Organism=Escherichia coli, GI48994995, Length=148, Percent_Identity=35.8108108108108, Blast_Score=116, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI71986510, Length=218, Percent_Identity=29.3577981651376, Blast_Score=95, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI212645999, Length=218, Percent_Identity=29.3577981651376, Blast_Score=95, Evalue=4e-20,
Organism=Saccharomyces cerevisiae, GI6321371, Length=176, Percent_Identity=37.5, Blast_Score=111, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015375
- InterPro:   IPR022925
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR015376 [H]

Pfam domain/function: PF00293 NUDIX; PF09296 NUDIX-like; PF09297 zf-NADH-PPase [H]

EC number: =3.6.1.22 [H]

Molecular weight: Translated: 34721; Mature: 34590

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPFDLFPLGKPAFVGHPIERAAHLRFHDDKLLAFEGKPSTRAYVVHRDSLVLKRDGDQL
CCCCCCCCCCCCCCCCCCHHHHHEEEEECCEEEEEECCCCCEEEEEEECCEEEECCCHHH
RPLLSIDEALGFGANPGTIFLGLQDGAAVFGMGISPAAVEKLAGREDVSVTELRGLAMQG
HHHHHHHHHHCCCCCCCEEEEEECCCCEEEECCCCHHHHHHHCCCCCCCHHHHHHHHHCC
AIPVEQLATIAMAKSMVSWHQRHGFCANCGTKTAMREGGWKRECPNCKTEHFPRTDPVVI
CCCHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEE
SLVASGDKCLLGRQKQFPAGMYSCLAGFVEAAETIEDAVRREVFEESGIRCTDVTYYMTQ
EEEECCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEC
PWPYPSSLMIGCSARALNEDIVIDRTELEDVRWFSRDEAQLMLQRQHPDGLAGPHPFAIA
CCCCCCCEEEECCHHHCCCCEEEECCHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHH
HHLVGRWLLMQTSGS
HHHHHHEEEEEECCC
>Mature Secondary Structure 
SPFDLFPLGKPAFVGHPIERAAHLRFHDDKLLAFEGKPSTRAYVVHRDSLVLKRDGDQL
CCCCCCCCCCCCCCCCCHHHHHEEEEECCEEEEEECCCCCEEEEEEECCEEEECCCHHH
RPLLSIDEALGFGANPGTIFLGLQDGAAVFGMGISPAAVEKLAGREDVSVTELRGLAMQG
HHHHHHHHHHCCCCCCCEEEEEECCCCEEEECCCCHHHHHHHCCCCCCCHHHHHHHHHCC
AIPVEQLATIAMAKSMVSWHQRHGFCANCGTKTAMREGGWKRECPNCKTEHFPRTDPVVI
CCCHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEE
SLVASGDKCLLGRQKQFPAGMYSCLAGFVEAAETIEDAVRREVFEESGIRCTDVTYYMTQ
EEEECCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEC
PWPYPSSLMIGCSARALNEDIVIDRTELEDVRWFSRDEAQLMLQRQHPDGLAGPHPFAIA
CCCCCCCEEEECCHHHCCCCEEEECCHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHH
HHLVGRWLLMQTSGS
HHHHHHEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA