| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is 146337877
Identifier: 146337877
GI number: 146337877
Start: 807679
End: 808098
Strand: Reverse
Name: 146337877
Synonym: BRADO0762
Alternate gene names: NA
Gene position: 808098-807679 (Counterclockwise)
Preceding gene: 146337882
Following gene: 146337876
Centisome position: 10.84
GC content: 64.76
Gene sequence:
>420_bases ATGTCCGAATCAGCCTGGTCGCTCCACCCGCAATTGGCGAAGGACACGATCAATATCGGCGACCTGCCGCTGTCGCGCGT GCTGGTGATCAAGGACGCCAACTATCCGTGGCTGCTGCTGGTGCCGCGCCGCGAGGACGCGGTCGAGATCATCGATCTCG ACGAGGTCGCCCAGGCGCAGCTGATGACCGAGATCACGCGGGTGTCGCGCGCCGTCAAGGAGATCACCAAGTGCGACAAG CTGAACGTCGCCGCGCTCGGCAACATGGTGCCGCAGCTGCACATCCATATCATCGCCCGCCGCACCAGTGACGTGGCCTG GCCGCGCCCGGTCTGGGGCGTCGCAACCCCTGTGCCACACGACGCGCAGGAGGTTGAGAGTTTCATCAGCGCTGTCAGGC GCAAGATCTGGCTAGGGTGA
Upstream 100 bases:
>100_bases CCGGTCCGGCCCAGCGCCCCGCGGGCTTGTGCCGCAGCTCGGAAAGGATTTAGGTGCCGCAGCGCTGCCCGCATGACCGC CCTGCCAGGAACCCGCCCTC
Downstream 100 bases:
>100_bases GAGATGTCGCCATTCGACTTGTTTCCATTGGGCAAGCCGGCCTTCGTCGGCCATCCGATCGAGCGCGCCGCCCATCTGCG CTTTCATGACGACAAGCTGC
Product: putative histidine triad (HIT) protein
Products: NA
Alternate protein names: Histidine Triad Family Protein; HIT Family Hydrolase; Histidine Triad Domain Protein; Diadenosine Tetraphosphate Hydrolase; Histidine Triad; HIT Hydrolase; Pectate Lyase/Amb Allergen; HIT Family Protein; Diadenosine Tetraphosphate; HIT Domain-Containing Protein; HIT1 Protein; Diadenosine Tetraphosphate Hydrolase-Like Protein
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MSESAWSLHPQLAKDTINIGDLPLSRVLVIKDANYPWLLLVPRREDAVEIIDLDEVAQAQLMTEITRVSRAVKEITKCDK LNVAALGNMVPQLHIHIIARRTSDVAWPRPVWGVATPVPHDAQEVESFISAVRRKIWLG
Sequences:
>Translated_139_residues MSESAWSLHPQLAKDTINIGDLPLSRVLVIKDANYPWLLLVPRREDAVEIIDLDEVAQAQLMTEITRVSRAVKEITKCDK LNVAALGNMVPQLHIHIIARRTSDVAWPRPVWGVATPVPHDAQEVESFISAVRRKIWLG >Mature_138_residues SESAWSLHPQLAKDTINIGDLPLSRVLVIKDANYPWLLLVPRREDAVEIIDLDEVAQAQLMTEITRVSRAVKEITKCDKL NVAALGNMVPQLHIHIIARRTSDVAWPRPVWGVATPVPHDAQEVESFISAVRRKIWLG
Specific function: Unknown
COG id: COG0537
COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15631; Mature: 15500
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: PS51084 HIT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSESAWSLHPQLAKDTINIGDLPLSRVLVIKDANYPWLLLVPRREDAVEIIDLDEVAQAQ CCCCCCCCCCHHHHCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCEEEECHHHHHHHH LMTEITRVSRAVKEITKCDKLNVAALGNMVPQLHIHIIARRTSDVAWPRPVWGVATPVPH HHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHEEEEEEEECCCCCCCCCCCCCCCCCCCC DAQEVESFISAVRRKIWLG CHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SESAWSLHPQLAKDTINIGDLPLSRVLVIKDANYPWLLLVPRREDAVEIIDLDEVAQAQ CCCCCCCCCHHHHCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCEEEECHHHHHHHH LMTEITRVSRAVKEITKCDKLNVAALGNMVPQLHIHIIARRTSDVAWPRPVWGVATPVPH HHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHEEEEEEEECCCCCCCCCCCCCCCCCCCC DAQEVESFISAVRRKIWLG CHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA