| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is pyrE [H]
Identifier: 146337863
GI number: 146337863
Start: 787819
End: 788376
Strand: Reverse
Name: pyrE [H]
Synonym: BRADO0748
Alternate gene names: 146337863
Gene position: 788376-787819 (Counterclockwise)
Preceding gene: 146337865
Following gene: 146337862
Centisome position: 10.57
GC content: 67.92
Gene sequence:
>558_bases GTGTCCAAATCCGCCTCCCGCGCCCGCCTCCTCGAGATCATCCGCAGGCGCTCTTTCGGCCGCGGCGAGGTCACCCTGGC CTCGGGCCGCAAGAGCGATTTCTATTTCAACCTGAAGCCGACCATGATGGACCCGGAGGGCGCCACCCTGCTCGCCGAGC TCACCTACGAGGCGCTGAAGGACGACGGCTACGACTATATCGGCGGGCTGGAGATGGGTGCCGTGCCGCTGGCCGGCGCG ATCGCGCAGATTTCGTGGATCAAGGGCCATCCGATCGCGGCCTTCTTCGTGCGCAAGAAGCCGAAGGAGCACGGCGCCAG GCTCGCGATCGAGGGACTGACCCGGGACGAGACCCTGGCGGGAAAACGCATCGTCGTGGTCGAGGACGTCACCACGACGG GCGGCTCGGCGATGAAGGCGGTCGAGACGTTGCGCGAGGCCGGCGCCGAGGTGTCGCTGGTGTTCACCATGGTCGACCGC GAGGAAGGCGCCGCCGAGGCCTTCGCGGCCGCCGGCCTCTCGTTCCGCGCGCTCTACAAGGCGCGCGAATTTCTCTGA
Upstream 100 bases:
>100_bases GTCCGAGGCCGATAGATTGCGCCACCCAAGAAGTCGCCAAGAAGCCGCCAAGAATCGACCGAGACCTCACTCAAGATCTG ACCCCTCAAGGGAAAACGCC
Downstream 100 bases:
>100_bases TCCGGTCCTCCGCGGCGCAATTCGCAACCGCGCACACCGCTCATTTACCAAAGGCTCGTTAAGGTTACTGCAAAGCTGAC GGCGCCATGCCCTGGGGCAT
Product: orotate phosphoribosyltransferase
Products: NA
Alternate protein names: OPRT; OPRTase [H]
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MSKSASRARLLEIIRRRSFGRGEVTLASGRKSDFYFNLKPTMMDPEGATLLAELTYEALKDDGYDYIGGLEMGAVPLAGA IAQISWIKGHPIAAFFVRKKPKEHGARLAIEGLTRDETLAGKRIVVVEDVTTTGGSAMKAVETLREAGAEVSLVFTMVDR EEGAAEAFAAAGLSFRALYKAREFL
Sequences:
>Translated_185_residues MSKSASRARLLEIIRRRSFGRGEVTLASGRKSDFYFNLKPTMMDPEGATLLAELTYEALKDDGYDYIGGLEMGAVPLAGA IAQISWIKGHPIAAFFVRKKPKEHGARLAIEGLTRDETLAGKRIVVVEDVTTTGGSAMKAVETLREAGAEVSLVFTMVDR EEGAAEAFAAAGLSFRALYKAREFL >Mature_184_residues SKSASRARLLEIIRRRSFGRGEVTLASGRKSDFYFNLKPTMMDPEGATLLAELTYEALKDDGYDYIGGLEMGAVPLAGAI AQISWIKGHPIAAFFVRKKPKEHGARLAIEGLTRDETLAGKRIVVVEDVTTTGGSAMKAVETLREAGAEVSLVFTMVDRE EGAAEAFAAAGLSFRALYKAREFL
Specific function: Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) [H]
COG id: COG0461
COG function: function code F; Orotate phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrE subfamily [H]
Homologues:
Organism=Homo sapiens, GI4507835, Length=171, Percent_Identity=26.3157894736842, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17554964, Length=181, Percent_Identity=29.8342541436464, Blast_Score=77, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17508631, Length=176, Percent_Identity=26.7045454545455, Blast_Score=67, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004467 - InterPro: IPR023031 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.4.2.10 [H]
Molecular weight: Translated: 20077; Mature: 19946
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKSASRARLLEIIRRRSFGRGEVTLASGRKSDFYFNLKPTMMDPEGATLLAELTYEALK CCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEECCCEECCCCCCHHHHHHHHHHH DDGYDYIGGLEMGAVPLAGAIAQISWIKGHPIAAFFVRKKPKEHGARLAIEGLTRDETLA CCCCCEECCCCCCCHHHHHHHHHEEEECCCCEEEEEEECCCHHCCCEEEEECCCCCCCCC GKRIVVVEDVTTTGGSAMKAVETLREAGAEVSLVFTMVDREEGAAEAFAAAGLSFRALYK CCEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHCCCHHHHHHH AREFL HHHCC >Mature Secondary Structure SKSASRARLLEIIRRRSFGRGEVTLASGRKSDFYFNLKPTMMDPEGATLLAELTYEALK CCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEECCCEECCCCCCHHHHHHHHHHH DDGYDYIGGLEMGAVPLAGAIAQISWIKGHPIAAFFVRKKPKEHGARLAIEGLTRDETLA CCCCCEECCCCCCCHHHHHHHHHEEEECCCCEEEEEEECCCHHCCCEEEEECCCCCCCCC GKRIVVVEDVTTTGGSAMKAVETLREAGAEVSLVFTMVDREEGAAEAFAAAGLSFRALYK CCEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHCCCHHHHHHH AREFL HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA