Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
---|---|
Accession | NC_009445 |
Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is marR [C]
Identifier: 146337806
GI number: 146337806
Start: 718444
End: 718953
Strand: Direct
Name: marR [C]
Synonym: BRADO0685
Alternate gene names: 146337806
Gene position: 718444-718953 (Clockwise)
Preceding gene: 146337805
Following gene: 146337809
Centisome position: 9.64
GC content: 64.9
Gene sequence:
>510_bases ATGCCGAGTAAGCCGCCCGAGATCACGATGGACGCGGTCTATACCAAGCCCGGCTATCTGTTCCGGCGTATGCAGCAGAT CGCGGTCTCCATCTTCGTGGAGGAATGCCGGGAGTTCGACCTCACGCCCGTGCAATATGCCGCGTTGGTCGCGATCCAGA ATCATCCCGGCATCGATGCCACGCGGCTGTCCGCGGTGATCGCGTTCGATCGCTCCACGCTCGGCAGCGTGATCGAGCGG CTCGAGGCCAAGGGCCATGTCGAGCGCAAGCCCTCGGCCGAGGACAAGCGCGTGAAGCTGCTGTATCTGACCAGGGCTGG TGCGGCGCTGCTGCGCAACATCATGCCGTTCGTCGACCGCGCGCAGGCGCGCATGCTGGCGCCGTTGAAAGCCGCCGATC GCAAGATGCTCATGGCGCTGCTGTCGCAACTGGTCGATCTCAACAACGAGGTGTCGCGCGTGCCGCTGCGCGCCGAGGAC GCGATGGAGCATCTCGGCAAAGGCGGCTGA
Upstream 100 bases:
>100_bases TTCGGCGTCGATGTCGCCGCGTTCCCGCGTCTGCTTCAGGCCGAAGCCGCAGCCAAGGCGCTGCCGGCGTTTGCCGATGC CGCTCCGGAGCGCCAGCCCG
Downstream 100 bases:
>100_bases GACCCGTTGCTGGGGCCTGCGCGGTGGACCGCGTTCGCTCATAGCCGCATCACCGCTTGGCGATCGATCTTGCCGGTGCC GGTCTTCGGCAGTTCGTCGA
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; MarR-Family Transcriptional Regulator; Transcriptional Regulatory Protein; Transcription Regulator MarR Family; Transcriptional Regulator Protein Marr Family; Transcription Regulator Protein; Regulatory Protein MarR; Transcription Regulator Protein MarR Family; MarR Family Transcription Regulator Protein; Transcriptional Regulator Protein; Transcriptional Regulator MarR Family Protein; MarR Family Regulatory Helix-Turn-Helix Protein; Regulatory Protein Marr; MarR Family Regulatory Helix-Turn-Helix
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MPSKPPEITMDAVYTKPGYLFRRMQQIAVSIFVEECREFDLTPVQYAALVAIQNHPGIDATRLSAVIAFDRSTLGSVIER LEAKGHVERKPSAEDKRVKLLYLTRAGAALLRNIMPFVDRAQARMLAPLKAADRKMLMALLSQLVDLNNEVSRVPLRAED AMEHLGKGG
Sequences:
>Translated_169_residues MPSKPPEITMDAVYTKPGYLFRRMQQIAVSIFVEECREFDLTPVQYAALVAIQNHPGIDATRLSAVIAFDRSTLGSVIER LEAKGHVERKPSAEDKRVKLLYLTRAGAALLRNIMPFVDRAQARMLAPLKAADRKMLMALLSQLVDLNNEVSRVPLRAED AMEHLGKGG >Mature_168_residues PSKPPEITMDAVYTKPGYLFRRMQQIAVSIFVEECREFDLTPVQYAALVAIQNHPGIDATRLSAVIAFDRSTLGSVIERL EAKGHVERKPSAEDKRVKLLYLTRAGAALLRNIMPFVDRAQARMLAPLKAADRKMLMALLSQLVDLNNEVSRVPLRAEDA MEHLGKGG
Specific function: Repressor Of The Marrab Operon Which Is Involved In The Activation Of Both Antibiotic Resistance And Oxidative Stress Genes. Binds To The Maro Operator/Promoter Site. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18829; Mature: 18698
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSKPPEITMDAVYTKPGYLFRRMQQIAVSIFVEECREFDLTPVQYAALVAIQNHPGIDA CCCCCCCCCHHHEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEEECCCCCCCH TRLSAVIAFDRSTLGSVIERLEAKGHVERKPSAEDKRVKLLYLTRAGAALLRNIMPFVDR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHH AQARMLAPLKAADRKMLMALLSQLVDLNNEVSRVPLRAEDAMEHLGKGG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHCCCC >Mature Secondary Structure PSKPPEITMDAVYTKPGYLFRRMQQIAVSIFVEECREFDLTPVQYAALVAIQNHPGIDA CCCCCCCCHHHEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEEECCCCCCCH TRLSAVIAFDRSTLGSVIERLEAKGHVERKPSAEDKRVKLLYLTRAGAALLRNIMPFVDR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHH AQARMLAPLKAADRKMLMALLSQLVDLNNEVSRVPLRAEDAMEHLGKGG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA