Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is yddG [H]

Identifier: 146337696

GI number: 146337696

Start: 579473

End: 580345

Strand: Direct

Name: yddG [H]

Synonym: BRADO0564

Alternate gene names: 146337696

Gene position: 579473-580345 (Clockwise)

Preceding gene: 146337695

Following gene: 146337697

Centisome position: 7.77

GC content: 68.84

Gene sequence:

>873_bases
ATGTCCCAGCGCACCGCGACCCTGATCGGTCTGACAGCGATCCTGATGTGGTCGCTGCTGGCCCTGTTGACGGTTGCGAC
CGGCAAGATCCCCGCGTTTCAGCTTGCCGCGATGACATTCGCGGTCGGCGGCCTGGTCGGCATGCTGACCTGGATCGGCC
GCCCAGCGGCGCCGCGCAGCCTCAAGCAGCCGATGCGGGCCTGGCTGGTCGGGGTCGGCGGATTGTTCGGCTACCACGCG
CTGTATTTCCTCGCGCTGCGTTTCGCGCCGCCTGCAGAAGCGGGACTGCTGAACTATCTCTGGCCGCTCCTGATCGTGCT
GTTCTCGGCGCTGCTGCCCGGCGAGCGGCTGGCCCTTCACCACGTGATCGGCGCCGCGCTCGGGCTCATCGGCACCGTGT
TGCTGTTCATGGGCAACGGCGCGAGCTTCGCCGCCGACCAGCTGCCGGGATTGGCGGCGGCCTTCGTGGCGGCGTTCGTG
TGGGCGATCTACTCGGTGCTGTCGCGCCGCCTCAAGGCGGTGCCGACCGATGCCGTGGCGGGCTTCTGTCTCGCGACCTC
GCTGCTTGCGGCGGTGGTGCATGGGCTGGTCGAGCCTAAGGTATGGCCCGATGGTGCGGTCCAGTGGCTTGCGGTCGCAG
GCCTCGGCATCGGCCCGGTGGGGGCGGCGTTCTATGCCTGGGATGTCGGCATGAAGCGCGGCGACATTCGCGTCCTCGGT
GCGGCGTCCTATGCAACCCCACTGCTGTCGACCGCCTTTCTCATTCTCGCCGGCTACGCCCAGCCGACCGCCGCGATCGC
TGTGGCGGCGCTGCTGATTGCCGGTGGCGGACTGGTCGCCGCGAAGGACCTCTTCCTGCTGCGCCGTCGCTAA

Upstream 100 bases:

>100_bases
GCCCGCGCCTGCCGCGGGCATTCACGTCTTTGGCGTTGCCCGGCACGGGCACAGGCGTGAGCGGCCGAATGTCCTTGGCC
GAGACGGAGCCTGCCGCCCG

Downstream 100 bases:

>100_bases
GCGCCTGTGCTGCATCACCAGCGGGCCTGCGCCACGCCTGATCGAGCGGCCGCATCATGCTCGGCAGGAATCTGCCGATT
ATCCTTGATGCGCACTTAAT

Product: putative transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MSQRTATLIGLTAILMWSLLALLTVATGKIPAFQLAAMTFAVGGLVGMLTWIGRPAAPRSLKQPMRAWLVGVGGLFGYHA
LYFLALRFAPPAEAGLLNYLWPLLIVLFSALLPGERLALHHVIGAALGLIGTVLLFMGNGASFAADQLPGLAAAFVAAFV
WAIYSVLSRRLKAVPTDAVAGFCLATSLLAAVVHGLVEPKVWPDGAVQWLAVAGLGIGPVGAAFYAWDVGMKRGDIRVLG
AASYATPLLSTAFLILAGYAQPTAAIAVAALLIAGGGLVAAKDLFLLRRR

Sequences:

>Translated_290_residues
MSQRTATLIGLTAILMWSLLALLTVATGKIPAFQLAAMTFAVGGLVGMLTWIGRPAAPRSLKQPMRAWLVGVGGLFGYHA
LYFLALRFAPPAEAGLLNYLWPLLIVLFSALLPGERLALHHVIGAALGLIGTVLLFMGNGASFAADQLPGLAAAFVAAFV
WAIYSVLSRRLKAVPTDAVAGFCLATSLLAAVVHGLVEPKVWPDGAVQWLAVAGLGIGPVGAAFYAWDVGMKRGDIRVLG
AASYATPLLSTAFLILAGYAQPTAAIAVAALLIAGGGLVAAKDLFLLRRR
>Mature_289_residues
SQRTATLIGLTAILMWSLLALLTVATGKIPAFQLAAMTFAVGGLVGMLTWIGRPAAPRSLKQPMRAWLVGVGGLFGYHAL
YFLALRFAPPAEAGLLNYLWPLLIVLFSALLPGERLALHHVIGAALGLIGTVLLFMGNGASFAADQLPGLAAAFVAAFVW
AIYSVLSRRLKAVPTDAVAGFCLATSLLAAVVHGLVEPKVWPDGAVQWLAVAGLGIGPVGAAFYAWDVGMKRGDIRVLGA
ASYATPLLSTAFLILAGYAQPTAAIAVAALLIAGGGLVAAKDLFLLRRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DUF6 domain [H]

Homologues:

Organism=Escherichia coli, GI145693132, Length=295, Percent_Identity=28.135593220339, Blast_Score=78, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 30153; Mature: 30022

Theoretical pI: Translated: 10.63; Mature: 10.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQRTATLIGLTAILMWSLLALLTVATGKIPAFQLAAMTFAVGGLVGMLTWIGRPAAPRS
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
LKQPMRAWLVGVGGLFGYHALYFLALRFAPPAEAGLLNYLWPLLIVLFSALLPGERLALH
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH
HVIGAALGLIGTVLLFMGNGASFAADQLPGLAAAFVAAFVWAIYSVLSRRLKAVPTDAVA
HHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
GFCLATSLLAAVVHGLVEPKVWPDGAVQWLAVAGLGIGPVGAAFYAWDVGMKRGDIRVLG
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEE
AASYATPLLSTAFLILAGYAQPTAAIAVAALLIAGGGLVAAKDLFLLRRR
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
SQRTATLIGLTAILMWSLLALLTVATGKIPAFQLAAMTFAVGGLVGMLTWIGRPAAPRS
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
LKQPMRAWLVGVGGLFGYHALYFLALRFAPPAEAGLLNYLWPLLIVLFSALLPGERLALH
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH
HVIGAALGLIGTVLLFMGNGASFAADQLPGLAAAFVAAFVWAIYSVLSRRLKAVPTDAVA
HHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
GFCLATSLLAAVVHGLVEPKVWPDGAVQWLAVAGLGIGPVGAAFYAWDVGMKRGDIRVLG
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEE
AASYATPLLSTAFLILAGYAQPTAAIAVAALLIAGGGLVAAKDLFLLRRR
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 1834669; 7567469 [H]