Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

Click here to switch to the map view.

The map label for this gene is sam [H]

Identifier: 146337578

GI number: 146337578

Start: 444556

End: 445473

Strand: Direct

Name: sam [H]

Synonym: BRADO0433

Alternate gene names: 146337578

Gene position: 444556-445473 (Clockwise)

Preceding gene: 146337566

Following gene: 146337582

Centisome position: 5.96

GC content: 67.43

Gene sequence:

>918_bases
ATGAGCGTGCTCTCCCGAATCTCCACCGCCAATGACGAGCGCTCGGCGCGGCTGGCCGGCATCGGCCTGATGCTGCTGTC
GATTGCGATGTTCTCGTTCGGCGATGCCCTGGGCAAGTTCCTGGTCTCGACCTATGCCGTCGGCCAGCTGTTGTGGCTGC
GCGCCTGCGCGGCGCTGCTGCTGCTCGCGCCGTTCATCTGGCGCAACCGCGCGGCGTTCGTGCAACTCGAACGACCCTGG
CTGCAGCTGGTGCGCGTGATCCTGTCGACGCTCGAGGTCGCGGCGTTCTTCCTCGCGACCGTCTATCTGCCGCTCGCCGA
CGTCATCACCTACTATCTTGCCGGTCCGATCTTCGTCACCGCGCTGTCGGCGCTGGTCCTGCGCGAGCATGTCGGCTGGC
GGCGCTGGACCGCGATCCTGATCGGCTTCTGCGGCGTGCTGATTGCGCTCCGTCCGTCGGCGCAGACCTTCAGCCTGCCG
GCTCTGATCGCGCTCGGCGGCAGCCTCTCCTTCGCGGTGCTGATGCTGATCACGCGCAGCCTGCGCGCGACGCCCGACAT
CGTGATGGCGTCGTCGCAATTCGTCGGCACCTTCCTGCTGGGTGCCGCGATGTCCGCCTTCGGCTGGGTGACGCCGACGC
CCGGCAGCCTCGTGATGTTCGCCGCCGCCGGGCTGATCTCGGTGACGGCGCTGTTCTGCGTCAACCGCTCGCTGAAGCTC
GCGCCGGCCTCGGTGGTCGTGCCCTACCAGTACACGATGATCGTCTGGGCCGTGCTGTTCGGCTTCGTCGTGTTCGGCGA
CGTTCCGCATCCCGCGACGATCATCGGCGCGATCATCATCATCGGCGCCGGCCTCTACATCTACTTGCGCGAACGCAGCC
TGGGGCAGGGCGCTGGTTCCGTGAATCCGCCCGTCTAG

Upstream 100 bases:

>100_bases
GGGATGGACAAGGCTTGCGCAGGGGTTGCGGCAGGGCTGCGTGACGCTTTCAGCCGAAGGGCTGGAGCGCCGGCAGTGCG
CCTGATAAGGCAGCCCGATC

Downstream 100 bases:

>100_bases
CGGTATCCACCGCTGTCGTCCCTGCGAACGCAGGGACCCCTACCGCGGAAGCTATCGAGGGAACGTGGCTGGCAGTTGCG
TGCCTCAATACGGCCGGTGG

Product: DMT family permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MSVLSRISTANDERSARLAGIGLMLLSIAMFSFGDALGKFLVSTYAVGQLLWLRACAALLLLAPFIWRNRAAFVQLERPW
LQLVRVILSTLEVAAFFLATVYLPLADVITYYLAGPIFVTALSALVLREHVGWRRWTAILIGFCGVLIALRPSAQTFSLP
ALIALGGSLSFAVLMLITRSLRATPDIVMASSQFVGTFLLGAAMSAFGWVTPTPGSLVMFAAAGLISVTALFCVNRSLKL
APASVVVPYQYTMIVWAVLFGFVVFGDVPHPATIIGAIIIIGAGLYIYLRERSLGQGAGSVNPPV

Sequences:

>Translated_305_residues
MSVLSRISTANDERSARLAGIGLMLLSIAMFSFGDALGKFLVSTYAVGQLLWLRACAALLLLAPFIWRNRAAFVQLERPW
LQLVRVILSTLEVAAFFLATVYLPLADVITYYLAGPIFVTALSALVLREHVGWRRWTAILIGFCGVLIALRPSAQTFSLP
ALIALGGSLSFAVLMLITRSLRATPDIVMASSQFVGTFLLGAAMSAFGWVTPTPGSLVMFAAAGLISVTALFCVNRSLKL
APASVVVPYQYTMIVWAVLFGFVVFGDVPHPATIIGAIIIIGAGLYIYLRERSLGQGAGSVNPPV
>Mature_304_residues
SVLSRISTANDERSARLAGIGLMLLSIAMFSFGDALGKFLVSTYAVGQLLWLRACAALLLLAPFIWRNRAAFVQLERPWL
QLVRVILSTLEVAAFFLATVYLPLADVITYYLAGPIFVTALSALVLREHVGWRRWTAILIGFCGVLIALRPSAQTFSLPA
LIALGGSLSFAVLMLITRSLRATPDIVMASSQFVGTFLLGAAMSAFGWVTPTPGSLVMFAAAGLISVTALFCVNRSLKLA
PASVVVPYQYTMIVWAVLFGFVVFGDVPHPATIIGAIIIIGAGLYIYLRERSLGQGAGSVNPPV

Specific function: Transports S-adenosylmethionine [H]

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 32685; Mature: 32554

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVLSRISTANDERSARLAGIGLMLLSIAMFSFGDALGKFLVSTYAVGQLLWLRACAALL
CCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLAPFIWRNRAAFVQLERPWLQLVRVILSTLEVAAFFLATVYLPLADVITYYLAGPIFVT
HHHHHHHCCCHHEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALSALVLREHVGWRRWTAILIGFCGVLIALRPSAQTFSLPALIALGGSLSFAVLMLITRS
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHCCHHHHHHHHHHHHH
LRATPDIVMASSQFVGTFLLGAAMSAFGWVTPTPGSLVMFAAAGLISVTALFCVNRSLKL
HCCCCCCEEECHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEE
APASVVVPYQYTMIVWAVLFGFVVFGDVPHPATIIGAIIIIGAGLYIYLRERSLGQGAGS
CCCEEEECHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHEEEECCCCCCCCCC
VNPPV
CCCCC
>Mature Secondary Structure 
SVLSRISTANDERSARLAGIGLMLLSIAMFSFGDALGKFLVSTYAVGQLLWLRACAALL
CHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLAPFIWRNRAAFVQLERPWLQLVRVILSTLEVAAFFLATVYLPLADVITYYLAGPIFVT
HHHHHHHCCCHHEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALSALVLREHVGWRRWTAILIGFCGVLIALRPSAQTFSLPALIALGGSLSFAVLMLITRS
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHCCHHHHHHHHHHHHH
LRATPDIVMASSQFVGTFLLGAAMSAFGWVTPTPGSLVMFAAAGLISVTALFCVNRSLKL
HCCCCCCEEECHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEE
APASVVVPYQYTMIVWAVLFGFVVFGDVPHPATIIGAIIIIGAGLYIYLRERSLGQGAGS
CCCEEEECHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHEEEECCCCCCCCCC
VNPPV
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]