Click here to switch to the map view.

The map label for this gene is ybhL [C]

Identifier: 146337543

GI number: 146337543

Start: 402301

End: 403092

Strand: Reverse

Name: ybhL [C]

Synonym: BRADO0397

Alternate gene names: 146337543

Gene position: 403092-402301 (Counterclockwise)

Preceding gene: 146337544

Following gene: 146337542

Centisome position: 5.41

GC content: 64.14

Gene sequence:

>792_bases
ATGTCGGACCTCAACCGCAACTATGCTTCACCCTTTGGCCGGGTGGCCGGGCGCGCTGATGCCGCGACCGTCGACGCCGG
TCTGCGCGCCTACATGCTGCGCATCTACAACTACATGAGCATCGGCTTGGCCATCACCGGCCTCGCGGCGCTCGGCGTCT
ACATGGCGGCCGTGACCGGAGATCCGGCGGCCGGCGTGTTCAAGTTCGGAAACGCCTACCTGACGCAGTTCGGCTACGCG
ATGTTCGTGAGCCCGCTGAAGTGGCTGTTCATCCTGGCTCCCCTGGTCATGGTGTTCGCGATCTCGGCCGGCATCAACCG
CCTGGCGCCGTCGACCGCGCAGCTCCTGTTCTGGGTGTTCTCGGCCTTGATGGGCGTGTCGCTGTCGTCGATCTTCCTGG
TGTACACGCACACCTCGATCGTGCGGGTGTTCTTCATCACCGCGGCGACGTTCGGTGCGCTCAGCCTGTACGGCTACACG
ACCAAGCGTGACATGACCGGCTTCGGCTCGTTCCTGTTCATGGGTCTGATCGGCATCGTGCTGGCGAGCCTCGTGAACCT
GTTCCTGGCGAGCTCGATGCTGCAGTTCATCGTCTCGGTGATCGGCGTGTTCGTGTTCGCTGGCCTGACCGCCTGGGACA
CGCAGCGCCTGAAGAACGAGTACATCTACGGCTACGCCTCCGCGGGCGGCGACATCGCCGAGCGCGCAGCGATCACGGGC
GCCCTGTCGCTGTACCTGAACTTCATCAACCTGTTCACGCTGCTGCTGCAGCTGCTCGGACAGCGCGACTGA

Upstream 100 bases:

>100_bases
ATTTAATATCGATGGCGGCTTCTGTGAGATAGGGTTTTTCGAGAACCGGCCAACGGTCCTGCCAGGACCGGGCTGCCGGG
CAACCAACGGGAATTCGACC

Downstream 100 bases:

>100_bases
TCCATTCGCTCGTAAGACGAGCGACGATTCAAAGCCCCGGCCTCACCGCCGGGGCTTTTCTTTTCGGGAACACCCGTGCA
CCCGGCGGGGCTGTCTCGAC

Product: putative transport protein membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MSDLNRNYASPFGRVAGRADAATVDAGLRAYMLRIYNYMSIGLAITGLAALGVYMAAVTGDPAAGVFKFGNAYLTQFGYA
MFVSPLKWLFILAPLVMVFAISAGINRLAPSTAQLLFWVFSALMGVSLSSIFLVYTHTSIVRVFFITAATFGALSLYGYT
TKRDMTGFGSFLFMGLIGIVLASLVNLFLASSMLQFIVSVIGVFVFAGLTAWDTQRLKNEYIYGYASAGGDIAERAAITG
ALSLYLNFINLFTLLLQLLGQRD

Sequences:

>Translated_263_residues
MSDLNRNYASPFGRVAGRADAATVDAGLRAYMLRIYNYMSIGLAITGLAALGVYMAAVTGDPAAGVFKFGNAYLTQFGYA
MFVSPLKWLFILAPLVMVFAISAGINRLAPSTAQLLFWVFSALMGVSLSSIFLVYTHTSIVRVFFITAATFGALSLYGYT
TKRDMTGFGSFLFMGLIGIVLASLVNLFLASSMLQFIVSVIGVFVFAGLTAWDTQRLKNEYIYGYASAGGDIAERAAITG
ALSLYLNFINLFTLLLQLLGQRD
>Mature_262_residues
SDLNRNYASPFGRVAGRADAATVDAGLRAYMLRIYNYMSIGLAITGLAALGVYMAAVTGDPAAGVFKFGNAYLTQFGYAM
FVSPLKWLFILAPLVMVFAISAGINRLAPSTAQLLFWVFSALMGVSLSSIFLVYTHTSIVRVFFITAATFGALSLYGYTT
KRDMTGFGSFLFMGLIGIVLASLVNLFLASSMLQFIVSVIGVFVFAGLTAWDTQRLKNEYIYGYASAGGDIAERAAITGA
LSLYLNFINLFTLLLQLLGQRD

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BI1 family [H]

Homologues:

Organism=Escherichia coli, GI1787004, Length=248, Percent_Identity=45.9677419354839, Blast_Score=175, Evalue=2e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006214 [H]

Pfam domain/function: PF01027 UPF0005 [H]

EC number: NA

Molecular weight: Translated: 28420; Mature: 28289

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLNRNYASPFGRVAGRADAATVDAGLRAYMLRIYNYMSIGLAITGLAALGVYMAAVTG
CCCCCCHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DPAAGVFKFGNAYLTQFGYAMFVSPLKWLFILAPLVMVFAISAGINRLAPSTAQLLFWVF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
SALMGVSLSSIFLVYTHTSIVRVFFITAATFGALSLYGYTTKRDMTGFGSFLFMGLIGIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
LASLVNLFLASSMLQFIVSVIGVFVFAGLTAWDTQRLKNEYIYGYASAGGDIAERAAITG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEEECCCCHHHHHHHHHH
ALSLYLNFINLFTLLLQLLGQRD
HHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SDLNRNYASPFGRVAGRADAATVDAGLRAYMLRIYNYMSIGLAITGLAALGVYMAAVTG
CCCCCHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DPAAGVFKFGNAYLTQFGYAMFVSPLKWLFILAPLVMVFAISAGINRLAPSTAQLLFWVF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
SALMGVSLSSIFLVYTHTSIVRVFFITAATFGALSLYGYTTKRDMTGFGSFLFMGLIGIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
LASLVNLFLASSMLQFIVSVIGVFVFAGLTAWDTQRLKNEYIYGYASAGGDIAERAAITG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEEECCCCHHHHHHHHHH
ALSLYLNFINLFTLLLQLLGQRD
HHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]