Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is ybbP [H]

Identifier: 146337544

GI number: 146337544

Start: 403372

End: 405942

Strand: Reverse

Name: ybbP [H]

Synonym: BRADO0398

Alternate gene names: 146337544

Gene position: 405942-403372 (Counterclockwise)

Preceding gene: 146337545

Following gene: 146337543

Centisome position: 5.44

GC content: 69.23

Gene sequence:

>2571_bases
ATGAGCACCATGGCCGAGCCGATCCCCGGCCGCCGCGTGGCGGCGCTGCCGGCGCGTTACGCCCTTCGTGAGCTGCGCGG
CGGTTTGCGCGGCTTCTATGTCTTCATCGCCTGCATCGCGCTCGGCGTGCTGGCCATCGCCGGCGTCGGCTCGGTGGCGG
CGAGCCTCAATGACGGCCTCGTCCGCGAGGGCCGAACCTTGCTCGGCGGCGACGTCGCGTTCTCGCTGTTTCAACGCGAG
GCCAAGCCGGAGGAGATCGCCTTCCTGCGCTCGCGCGGCCGGGTGTCACTGGCGGCGACGTTGCGGGCCATGGTCCGGGC
GGGCGATTCCAAGCTGGCGCTGGTCGAGCTCAAGGCGGTCGATAATGCCTACCCGCTGCTCGGCAAGGCCGAGCTTCGGC
CCGATCTGCCGATCGCCGATGTGCTCGCCGAACGCGACGGCGTGTTCGGCGCCGCCGCCGACCCGGCATTGCTGGCCCGC
CTCGACATCAAGGTCGGCGACATCGTCAACATCGACACCGTGCGTTTCCAGATCCGCAGCGCGCTGCAGGCCGAACCGGA
CAAGCTGTCGGGCGGAATCGGCCTCGGGCCGCGCTTCCTGATCAGCGAGGAGGGCTTGCGTGCCACGCCGCTGCTGCAGC
CCGGCAGCCTGGTGCGCTGGACCTACCGGGTCCGGTTGCCTGACAACGCCACCGACGACCGTGCCGCCGCCGCCCTCATC
GCCGATACGCGCGAGACCCTGCCGCAGGCCGGATGGGAGATCCGAAGCCGCAGCAACGCCTCGCCGCAGCTGGAGCGGAC
CATCGGCCGCTTCACGCAATTCCTGACCCTGGTCGGCCTCGCCGCACTCCTGGTCGGCGGTGTCGGCGTTGCCAACGCCG
TCAAAAGCCACGTCGACCGCCGGACCGAGGTGATCGCGGCATTCAAGGCGCTCGGCGCCACCAGCCGCGACGTGTTCGGC
ATCTATCTGATCCAGGTGATGGTGCTGGCGACGATCGGTTCGATCATCGGACTCTGCGCCGGCGCCGCGCTGCCTTTCGT
CATCGTCGGCCTGTTCGGCAAGATTCTGCCGTTGCCGGTGATCCCCGCCGTCCACCCCGACGAGCTGGCGCTGTCTTTCC
TCTACGGCCTCCTCACCGCGCTCGCATTCGGCCTGTGGCCGCTGGGGCGGGTCCGCGACGTGCCGGTGGCGGCGCTGTTT
CGCGAGGCGGTCATCGCCGAATGGCACCGGCCGCGCTGGAGCTATCTGGCGTTGATCGCGGGCACCGTCGCGCTGCTGAT
CGCGGTCGTGGTCGGCTTGTCCTACGACAAGAAGATTGCCGCGGTGTTCGTGGTGGCCGCCGCGCTGGTGTTCGTGCTGT
TGCGCGGCATCGCCGCCATTGTGATGGCGGTGGCGCGCGCCTTGCCGCGCAGCCGCTTCCCGATGCTGCGGCTCGCCGTC
AGCAACATCTACCGGCCTGGCGCGCTGACGCCGTCGGTGGTGCTGTCGCTCGGACTGGGGCTCGCGGTGCTGGTCACGAT
CACCCAGATCGACGGCAATCTGCGGCGGCAGTTCCTGGCGCAGCTGCCGGAGCAGGCCCCGTCGTTCTTCTTCGTCGACG
TGCCCTCCGGCCAGGCCAGCCGCTTCCGTGACTTCCTCAGGGAGCTGGCGCCGCAGTCCACGGTCGACGACGTGCCGATG
CTGCGCGGCCGGATCGTCTCCGCTCGCGGCGTGCGCGCCGAGGACCTCAAGGCGACCGCGGACACCGAATGGGTGCTGCA
GAGCGACCGTGGCCTCACCTATACCGGCGAGATCCCGAAGGGATCGAAGATCGTCGAGGGCGAATGGTGGGGCGATACCT
ACAGCGGCCCGCCGCTGGTCTCGATCGAGAAACGGATCGCCGACGGCCTCGGCCTCAGGCTCGGTGACGACATCGTCGTC
AACGTGCTCGGGCGCGACATCACCGCGAAGATCGGCAACATGCGCACGATCGACTGGCAGGGTCTCGGCATCAATTTCGT
GCTGGTGTTCTCGCCGAACGCCTTCAAGGGCGCGCCCCACACCCACGTGGCCACGTTGACCGAGTCGCGCTCCGATGCCG
CCGAGGATGCGCGCGTCATCCGCAAGGTGGCCGATGCCTTCCCGATGGTGACCAGTGTGCGGGTGCGCGAGGTCATGGAG
ACCGTCGGCTCCGTCGTCTCCAACCTCGCGCTCGCGATCCGCGGCGCCAGCGCGGTGACGCTGATCTCGGCCATCCTGGT
CCTGGGCGGCGCGCTGGCCGCGGGCCATCGTCATCGGGTCTATGACGCGGTGATCCTGAAGACGCTGGGCGCCACACGCC
TGCGGCTGCTCGGCGCCTATGCGCTCGAATATCTCATGATCGGCTTTGCGACCGCCGCGTTCGGCGTGATCGCCGGATCC
GTCTCGGCATGGCTGATCGTGACCCGGCTGATGACCCTGAGCTTCGTCTGGCAGGCCGGCAGCGCCGCGCTGGTCGTGCT
GGCGGCCCTGGTGGTGACCGTGGGCCTCGGCCTCGCCGGTACACTGCTGGCGCTCAACCAGAAGCCGGCCACGGTTCTCA
GGAACCTTTAG

Upstream 100 bases:

>100_bases
TGGTAACTCATGACAGCGGTCTCGCCCACCGCTGCGACCGCGTGGTACGACTGCGCTCCGGCCGGATCGAAGCCGACGGC
GCCCACGAGCCCGCCGACGC

Downstream 100 bases:

>100_bases
TGCAATTGTGCGCTCATGCCGCACGGTTAACGGGCTTTTCACGGCTCAAACGCGCGCGGAGCGACATTCAGCCGCGCGTG
GAAGCTTGCGCCAAATATGC

Product: putative ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 856; Mature: 855

Protein sequence:

>856_residues
MSTMAEPIPGRRVAALPARYALRELRGGLRGFYVFIACIALGVLAIAGVGSVAASLNDGLVREGRTLLGGDVAFSLFQRE
AKPEEIAFLRSRGRVSLAATLRAMVRAGDSKLALVELKAVDNAYPLLGKAELRPDLPIADVLAERDGVFGAAADPALLAR
LDIKVGDIVNIDTVRFQIRSALQAEPDKLSGGIGLGPRFLISEEGLRATPLLQPGSLVRWTYRVRLPDNATDDRAAAALI
ADTRETLPQAGWEIRSRSNASPQLERTIGRFTQFLTLVGLAALLVGGVGVANAVKSHVDRRTEVIAAFKALGATSRDVFG
IYLIQVMVLATIGSIIGLCAGAALPFVIVGLFGKILPLPVIPAVHPDELALSFLYGLLTALAFGLWPLGRVRDVPVAALF
REAVIAEWHRPRWSYLALIAGTVALLIAVVVGLSYDKKIAAVFVVAAALVFVLLRGIAAIVMAVARALPRSRFPMLRLAV
SNIYRPGALTPSVVLSLGLGLAVLVTITQIDGNLRRQFLAQLPEQAPSFFFVDVPSGQASRFRDFLRELAPQSTVDDVPM
LRGRIVSARGVRAEDLKATADTEWVLQSDRGLTYTGEIPKGSKIVEGEWWGDTYSGPPLVSIEKRIADGLGLRLGDDIVV
NVLGRDITAKIGNMRTIDWQGLGINFVLVFSPNAFKGAPHTHVATLTESRSDAAEDARVIRKVADAFPMVTSVRVREVME
TVGSVVSNLALAIRGASAVTLISAILVLGGALAAGHRHRVYDAVILKTLGATRLRLLGAYALEYLMIGFATAAFGVIAGS
VSAWLIVTRLMTLSFVWQAGSAALVVLAALVVTVGLGLAGTLLALNQKPATVLRNL

Sequences:

>Translated_856_residues
MSTMAEPIPGRRVAALPARYALRELRGGLRGFYVFIACIALGVLAIAGVGSVAASLNDGLVREGRTLLGGDVAFSLFQRE
AKPEEIAFLRSRGRVSLAATLRAMVRAGDSKLALVELKAVDNAYPLLGKAELRPDLPIADVLAERDGVFGAAADPALLAR
LDIKVGDIVNIDTVRFQIRSALQAEPDKLSGGIGLGPRFLISEEGLRATPLLQPGSLVRWTYRVRLPDNATDDRAAAALI
ADTRETLPQAGWEIRSRSNASPQLERTIGRFTQFLTLVGLAALLVGGVGVANAVKSHVDRRTEVIAAFKALGATSRDVFG
IYLIQVMVLATIGSIIGLCAGAALPFVIVGLFGKILPLPVIPAVHPDELALSFLYGLLTALAFGLWPLGRVRDVPVAALF
REAVIAEWHRPRWSYLALIAGTVALLIAVVVGLSYDKKIAAVFVVAAALVFVLLRGIAAIVMAVARALPRSRFPMLRLAV
SNIYRPGALTPSVVLSLGLGLAVLVTITQIDGNLRRQFLAQLPEQAPSFFFVDVPSGQASRFRDFLRELAPQSTVDDVPM
LRGRIVSARGVRAEDLKATADTEWVLQSDRGLTYTGEIPKGSKIVEGEWWGDTYSGPPLVSIEKRIADGLGLRLGDDIVV
NVLGRDITAKIGNMRTIDWQGLGINFVLVFSPNAFKGAPHTHVATLTESRSDAAEDARVIRKVADAFPMVTSVRVREVME
TVGSVVSNLALAIRGASAVTLISAILVLGGALAAGHRHRVYDAVILKTLGATRLRLLGAYALEYLMIGFATAAFGVIAGS
VSAWLIVTRLMTLSFVWQAGSAALVVLAALVVTVGLGLAGTLLALNQKPATVLRNL
>Mature_855_residues
STMAEPIPGRRVAALPARYALRELRGGLRGFYVFIACIALGVLAIAGVGSVAASLNDGLVREGRTLLGGDVAFSLFQREA
KPEEIAFLRSRGRVSLAATLRAMVRAGDSKLALVELKAVDNAYPLLGKAELRPDLPIADVLAERDGVFGAAADPALLARL
DIKVGDIVNIDTVRFQIRSALQAEPDKLSGGIGLGPRFLISEEGLRATPLLQPGSLVRWTYRVRLPDNATDDRAAAALIA
DTRETLPQAGWEIRSRSNASPQLERTIGRFTQFLTLVGLAALLVGGVGVANAVKSHVDRRTEVIAAFKALGATSRDVFGI
YLIQVMVLATIGSIIGLCAGAALPFVIVGLFGKILPLPVIPAVHPDELALSFLYGLLTALAFGLWPLGRVRDVPVAALFR
EAVIAEWHRPRWSYLALIAGTVALLIAVVVGLSYDKKIAAVFVVAAALVFVLLRGIAAIVMAVARALPRSRFPMLRLAVS
NIYRPGALTPSVVLSLGLGLAVLVTITQIDGNLRRQFLAQLPEQAPSFFFVDVPSGQASRFRDFLRELAPQSTVDDVPML
RGRIVSARGVRAEDLKATADTEWVLQSDRGLTYTGEIPKGSKIVEGEWWGDTYSGPPLVSIEKRIADGLGLRLGDDIVVN
VLGRDITAKIGNMRTIDWQGLGINFVLVFSPNAFKGAPHTHVATLTESRSDAAEDARVIRKVADAFPMVTSVRVREVMET
VGSVVSNLALAIRGASAVTLISAILVLGGALAAGHRHRVYDAVILKTLGATRLRLLGAYALEYLMIGFATAAFGVIAGSV
SAWLIVTRLMTLSFVWQAGSAALVVLAALVVTVGLGLAGTLLALNQKPATVLRNL

Specific function: Unknown

COG id: COG3127

COG function: function code Q; Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

Organism=Escherichia coli, GI1786704, Length=824, Percent_Identity=25.121359223301, Blast_Score=184, Evalue=2e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 91118; Mature: 90987

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTMAEPIPGRRVAALPARYALRELRGGLRGFYVFIACIALGVLAIAGVGSVAASLNDGL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
VREGRTLLGGDVAFSLFQREAKPEEIAFLRSRGRVSLAATLRAMVRAGDSKLALVELKAV
HHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEEEEC
DNAYPLLGKAELRPDLPIADVLAERDGVFGAAADPALLARLDIKVGDIVNIDTVRFQIRS
CCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHEECCCCCCEECHHHHHHHHHH
ALQAEPDKLSGGIGLGPRFLISEEGLRATPLLQPGSLVRWTYRVRLPDNATDDRAAAALI
HHHCCCHHCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHH
ADTRETLPQAGWEIRSRSNASPQLERTIGRFTQFLTLVGLAALLVGGVGVANAVKSHVDR
HHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
RTEVIAAFKALGATSRDVFGIYLIQVMVLATIGSIIGLCAGAALPFVIVGLFGKILPLPV
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
IPAVHPDELALSFLYGLLTALAFGLWPLGRVRDVPVAALFREAVIAEWHRPRWSYLALIA
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH
GTVALLIAVVVGLSYDKKIAAVFVVAAALVFVLLRGIAAIVMAVARALPRSRFPMLRLAV
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
SNIYRPGALTPSVVLSLGLGLAVLVTITQIDGNLRRQFLAQLPEQAPSFFFVDVPSGQAS
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEECCCCCHH
RFRDFLRELAPQSTVDDVPMLRGRIVSARGVRAEDLKATADTEWVLQSDRGLTYTGEIPK
HHHHHHHHHCCCCCCCCCHHHHCEEECCCCCCHHHCCCCCCCHHEEECCCCCEEECCCCC
GSKIVEGEWWGDTYSGPPLVSIEKRIADGLGLRLGDDIVVNVLGRDITAKIGNMRTIDWQ
CCEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHCCCEEEEEEC
GLGINFVLVFSPNAFKGAPHTHVATLTESRSDAAEDARVIRKVADAFPMVTSVRVREVME
CCCEEEEEEECCCCCCCCCCCEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVGSVVSNLALAIRGASAVTLISAILVLGGALAAGHRHRVYDAVILKTLGATRLRLLGAY
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
ALEYLMIGFATAAFGVIAGSVSAWLIVTRLMTLSFVWQAGSAALVVLAALVVTVGLGLAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
TLLALNQKPATVLRNL
HHHHCCCCCHHHHCCC
>Mature Secondary Structure 
STMAEPIPGRRVAALPARYALRELRGGLRGFYVFIACIALGVLAIAGVGSVAASLNDGL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
VREGRTLLGGDVAFSLFQREAKPEEIAFLRSRGRVSLAATLRAMVRAGDSKLALVELKAV
HHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEEEEC
DNAYPLLGKAELRPDLPIADVLAERDGVFGAAADPALLARLDIKVGDIVNIDTVRFQIRS
CCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHEECCCCCCEECHHHHHHHHHH
ALQAEPDKLSGGIGLGPRFLISEEGLRATPLLQPGSLVRWTYRVRLPDNATDDRAAAALI
HHHCCCHHCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHH
ADTRETLPQAGWEIRSRSNASPQLERTIGRFTQFLTLVGLAALLVGGVGVANAVKSHVDR
HHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
RTEVIAAFKALGATSRDVFGIYLIQVMVLATIGSIIGLCAGAALPFVIVGLFGKILPLPV
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
IPAVHPDELALSFLYGLLTALAFGLWPLGRVRDVPVAALFREAVIAEWHRPRWSYLALIA
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH
GTVALLIAVVVGLSYDKKIAAVFVVAAALVFVLLRGIAAIVMAVARALPRSRFPMLRLAV
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
SNIYRPGALTPSVVLSLGLGLAVLVTITQIDGNLRRQFLAQLPEQAPSFFFVDVPSGQAS
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEECCCCCHH
RFRDFLRELAPQSTVDDVPMLRGRIVSARGVRAEDLKATADTEWVLQSDRGLTYTGEIPK
HHHHHHHHHCCCCCCCCCHHHHCEEECCCCCCHHHCCCCCCCHHEEECCCCCEEECCCCC
GSKIVEGEWWGDTYSGPPLVSIEKRIADGLGLRLGDDIVVNVLGRDITAKIGNMRTIDWQ
CCEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHCCCEEEEEEC
GLGINFVLVFSPNAFKGAPHTHVATLTESRSDAAEDARVIRKVADAFPMVTSVRVREVME
CCCEEEEEEECCCCCCCCCCCEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVGSVVSNLALAIRGASAVTLISAILVLGGALAAGHRHRVYDAVILKTLGATRLRLLGAY
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
ALEYLMIGFATAAFGVIAGSVSAWLIVTRLMTLSFVWQAGSAALVVLAALVVTVGLGLAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
TLLALNQKPATVLRNL
HHHHCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]