| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146337477
Identifier: 146337477
GI number: 146337477
Start: 332169
End: 333623
Strand: Reverse
Name: 146337477
Synonym: BRADO0322
Alternate gene names: NA
Gene position: 333623-332169 (Counterclockwise)
Preceding gene: 146337478
Following gene: 146337476
Centisome position: 4.47
GC content: 67.84
Gene sequence:
>1455_bases ATGCGTGGGGTGAGCGGCCGCGTCGGGCAGCTTTTTTTCCTTGTCGTCGCGATCGCTCTCCTCACGGGAGCAACACCGGC CGCAGCCGACAAGCGCGTAGCCCTGGTGATCGGCAACTCCATCCACGAGCATGCGCCGCTGCTCGACGAGCCGGCGGTCG ATGCCAAGCTGATCGCGGACAAGCTGGCACAGCTCGGCTTCACCTTGAGCGGCGGCAGCGGCCAGATCGATCTGACCAAG CAGGGCTTCGACCGCGCGCTCGCGGAGTTCAAGGGCCGGATCGCCGATGCGGATGTCGCCCTGATCTACTTCGCCGGCTA CGGCATCAACCTCGGCGGCGCCAATTATCTCGTTCCGGTTGACGCGGCACCGGCGAAGGCGGCCGATGTCGAGACCGAGT TGCGCAGCCTCGCCGGCATCATGCGCGAACTGGACGGACCGGACAGCCGGGCGAACGTCGTGGTCCTCGACGCCTTCCGC TCGAACCCGTTCGCGGCCCGCGGCATTGCCGGGCTGTCAGCCGGTCTGGTGGCGACAAGCGTGCCCGCCAACACGCTGCT GTCCTTCTCCGCTCAACCGGGGACCGTAGGGCAGCGGGGACCGTACGGGCATAGTGCCTTCACCAACGCATTGGTCGAGG CGTTGACGGCGCCCAGTCCGGGTGCGCTGCTCGCGACGCTCAATCAGGCGGGAGTGGCAGTGAAGCGCGCGACCTCCGGG GCCCAGCAGCCGCTGCTCTTGGCGACGCCGCTCGGCGGCAGCGAGGTCGTTTTTGGCCCGCCGCGCGCGAATCCTGCGCC GGGCACAGCCGAATCCACGATCAAGACGCCCGCAAACCGGCAGGCTGCGGCGACGGCAGCCATGGGCCCGCCACCGGCCT CGACCGCCTCGGACGGCCGTACGCCCGGCCTCGCGGTGCTCTATGACGAGGATCCCTCCGATCCCAAAGGCAAGCGCTAT ACCGGCTCGGTGACGTGGCGGATGGAGACCATCAAGAGCCCGCAGTCCGGGCGAGCCGTGCCGGTGATCCGCGCCGAAAT CGATGTTCCAGACCGCAAGCTGAAGGCGACCCTGCAGCTGCGCCGCAACGACGATCCGACCCTGCCGGCCAGCCACGTCG CCGAGCTCACCTTCGCGCGCGCCGACGATTTCGCTGGCGGGGGGATCAACAACGTGCCGGGAATCCTGATGAAGTCGAAT GAGCAGGCGCGCGGTACGCCGCTTGCCGGCCTGGCGGTCAAGGTGACGGAAGGATCGTTCCTCGTCGGCCTCTCCAATGT CGACGCCGACCGCGCGCGCAACGGCGAACTCCTCGCCGGGCGTGAATGGTTCGACATTCCCCTCGTCTACAGCAATCAGC GCAGGGGTATCTTGGCCATCGGCAAAGGCCCCAGTGGCGACCGCGTCTTCGCAGATGTGTTTGCGGCCTGGGACAAGTCC CAGCCGGTCCAATAA
Upstream 100 bases:
>100_bases AAAATCTCTCGCATCCTCACTGATTTTCGTTCCGGATTTGTTCGGCTTGCGGTAAAATCGGAGCCCGAACGGGGCAACCG GAAGGCAGGAGATCGTTAGC
Downstream 100 bases:
>100_bases GTATTTACGCGCGGGATATTGGCGGAGCAGAGATTTTGGAGCGGGCGAAGGGGTTCGAACCCTCGACCCCGACCTTGGCA AGGTCGTGCTCTACCACTGA
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Caspase Domain Protein; Caspase-Like Domain- And TPR Repeat-Containing Peptidase; Peptidase C; CheA Signal Transduction Histidine Kinase; Caspase-Like Domain-Containing Protein; Peptidase Protein; Caspase Domain-Containing Protein; TPR Repeat-Containing Caspace; GUN4-Like Family; Helicase; Caspase; Peptidylprolyl Isomerase; ICE-Like Protease
Number of amino acids: Translated: 484; Mature: 484
Protein sequence:
>484_residues MRGVSGRVGQLFFLVVAIALLTGATPAAADKRVALVIGNSIHEHAPLLDEPAVDAKLIADKLAQLGFTLSGGSGQIDLTK QGFDRALAEFKGRIADADVALIYFAGYGINLGGANYLVPVDAAPAKAADVETELRSLAGIMRELDGPDSRANVVVLDAFR SNPFAARGIAGLSAGLVATSVPANTLLSFSAQPGTVGQRGPYGHSAFTNALVEALTAPSPGALLATLNQAGVAVKRATSG AQQPLLLATPLGGSEVVFGPPRANPAPGTAESTIKTPANRQAAATAAMGPPPASTASDGRTPGLAVLYDEDPSDPKGKRY TGSVTWRMETIKSPQSGRAVPVIRAEIDVPDRKLKATLQLRRNDDPTLPASHVAELTFARADDFAGGGINNVPGILMKSN EQARGTPLAGLAVKVTEGSFLVGLSNVDADRARNGELLAGREWFDIPLVYSNQRRGILAIGKGPSGDRVFADVFAAWDKS QPVQ
Sequences:
>Translated_484_residues MRGVSGRVGQLFFLVVAIALLTGATPAAADKRVALVIGNSIHEHAPLLDEPAVDAKLIADKLAQLGFTLSGGSGQIDLTK QGFDRALAEFKGRIADADVALIYFAGYGINLGGANYLVPVDAAPAKAADVETELRSLAGIMRELDGPDSRANVVVLDAFR SNPFAARGIAGLSAGLVATSVPANTLLSFSAQPGTVGQRGPYGHSAFTNALVEALTAPSPGALLATLNQAGVAVKRATSG AQQPLLLATPLGGSEVVFGPPRANPAPGTAESTIKTPANRQAAATAAMGPPPASTASDGRTPGLAVLYDEDPSDPKGKRY TGSVTWRMETIKSPQSGRAVPVIRAEIDVPDRKLKATLQLRRNDDPTLPASHVAELTFARADDFAGGGINNVPGILMKSN EQARGTPLAGLAVKVTEGSFLVGLSNVDADRARNGELLAGREWFDIPLVYSNQRRGILAIGKGPSGDRVFADVFAAWDKS QPVQ >Mature_484_residues MRGVSGRVGQLFFLVVAIALLTGATPAAADKRVALVIGNSIHEHAPLLDEPAVDAKLIADKLAQLGFTLSGGSGQIDLTK QGFDRALAEFKGRIADADVALIYFAGYGINLGGANYLVPVDAAPAKAADVETELRSLAGIMRELDGPDSRANVVVLDAFR SNPFAARGIAGLSAGLVATSVPANTLLSFSAQPGTVGQRGPYGHSAFTNALVEALTAPSPGALLATLNQAGVAVKRATSG AQQPLLLATPLGGSEVVFGPPRANPAPGTAESTIKTPANRQAAATAAMGPPPASTASDGRTPGLAVLYDEDPSDPKGKRY TGSVTWRMETIKSPQSGRAVPVIRAEIDVPDRKLKATLQLRRNDDPTLPASHVAELTFARADDFAGGGINNVPGILMKSN EQARGTPLAGLAVKVTEGSFLVGLSNVDADRARNGELLAGREWFDIPLVYSNQRRGILAIGKGPSGDRVFADVFAAWDKS QPVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50070; Mature: 50070
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGVSGRVGQLFFLVVAIALLTGATPAAADKRVALVIGNSIHEHAPLLDEPAVDAKLIAD CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHCCCCCCCCCCHHHHHHH KLAQLGFTLSGGSGQIDLTKQGFDRALAEFKGRIADADVALIYFAGYGINLGGANYLVPV HHHHCCEEEECCCCEEEEEHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEECCCCEEEEC DAAPAKAADVETELRSLAGIMRELDGPDSRANVVVLDAFRSNPFAARGIAGLSAGLVATS CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHCCCHHHHCCEEEC VPANTLLSFSAQPGTVGQRGPYGHSAFTNALVEALTAPSPGALLATLNQAGVAVKRATSG CCHHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEHHHCCEEEEECCCC AQQPLLLATPLGGSEVVFGPPRANPAPGTAESTIKTPANRQAAATAAMGPPPASTASDGR CCCCEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCC TPGLAVLYDEDPSDPKGKRYTGSVTWRMETIKSPQSGRAVPVIRAEIDVPDRKLKATLQL CCCEEEEECCCCCCCCCCEEEEEEEEEEEECCCCCCCCEEEEEEEECCCCCHHEEEEEEE RRNDDPTLPASHVAELTFARADDFAGGGINNVPGILMKSNEQARGTPLAGLAVKVTEGSF ECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEECCEE LVGLSNVDADRARNGELLAGREWFDIPLVYSNQRRGILAIGKGPSGDRVFADVFAAWDKS EEEECCCCCCCCCCCCEEECCCEEEEEEEECCCCCCEEEECCCCCCCHHHHHHHHHCCCC QPVQ CCCC >Mature Secondary Structure MRGVSGRVGQLFFLVVAIALLTGATPAAADKRVALVIGNSIHEHAPLLDEPAVDAKLIAD CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHCCCCCCCCCCHHHHHHH KLAQLGFTLSGGSGQIDLTKQGFDRALAEFKGRIADADVALIYFAGYGINLGGANYLVPV HHHHCCEEEECCCCEEEEEHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEECCCCEEEEC DAAPAKAADVETELRSLAGIMRELDGPDSRANVVVLDAFRSNPFAARGIAGLSAGLVATS CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHCCCHHHHCCEEEC VPANTLLSFSAQPGTVGQRGPYGHSAFTNALVEALTAPSPGALLATLNQAGVAVKRATSG CCHHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEHHHCCEEEEECCCC AQQPLLLATPLGGSEVVFGPPRANPAPGTAESTIKTPANRQAAATAAMGPPPASTASDGR CCCCEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCC TPGLAVLYDEDPSDPKGKRYTGSVTWRMETIKSPQSGRAVPVIRAEIDVPDRKLKATLQL CCCEEEEECCCCCCCCCCEEEEEEEEEEEECCCCCCCCEEEEEEEECCCCCHHEEEEEEE RRNDDPTLPASHVAELTFARADDFAGGGINNVPGILMKSNEQARGTPLAGLAVKVTEGSF ECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEECCEE LVGLSNVDADRARNGELLAGREWFDIPLVYSNQRRGILAIGKGPSGDRVFADVFAAWDKS EEEECCCCCCCCCCCCEEECCCEEEEEEEECCCCCCEEEECCCCCCCHHHHHHHHHCCCC QPVQ CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA