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The map label for this gene is ybbN [H]

Identifier: 146337476

GI number: 146337476

Start: 330848

End: 331768

Strand: Reverse

Name: ybbN [H]

Synonym: BRADO0321

Alternate gene names: 146337476

Gene position: 331768-330848 (Counterclockwise)

Preceding gene: 146337477

Following gene: 146337475

Centisome position: 4.45

GC content: 65.8

Gene sequence:

>921_bases
GTGACCATTGTTGAGCAGGGCGGCGGAGCGGCGCCGCAGGTGCCGGATCTGATCAAGGACACCACCACGCAGACCTTCGT
GAAGGACGTCATCGAGGAATCGAAGCGTCAGCCGGTCCTGATTGACTTCTGGGCGCCGTGGTGCGGCCCATGCAAGCAGC
TGACCCCGATCCTGGAAAAGGCCGTCAAGGCCGCCAAGGGCAAGGTCAAGCTGGTCAAGATGAACATCGACGAGCATCCG
GCCATTCCCGGCCAGATGGGCATCCAGTCGATCCCGGCGGTCATCGCCTTCGTCGGCGGCCGCCCGGCGGACGGCTTCAT
GGGCGCGGTGCCCGAGAGCCAGATCAACGCCTTCATCGAGAAGATCACGAAGGGCGTTCCCGGCGTCGGCGAGCCCGACA
TCAACGAGATCCTCAAGGAGGCCGAGGCGGTCCTGGCGGAGGGCGATCCGGCCGGCGCGGCGCAGATCTACGCCGAGGTG
CTGTCGTTCGACGCGGCCAATATCCCGGCTCTTGCCGGCCTCGCCAGATGTTATCTCGAAACCGGCGCGATCGAGCAGGC
CAAGGAGACGCTGGCCCAAGTGCCCGAGGCCAAGCGCGGCGATTCCGCCGTCTCGGCGGTGCAGGCGGCCATCGATCTGG
CTGAACAGGCGCAGTCGCTCGGGCCGCTGGGCGAGCTCGAACAGAAGGTCGCCGCAAATCCGCTGGATCATCAGGCGCGT
TTCGATCTCGCGATTGCGCTGAACGCGGCGGGCAAGCGGAAGGAAGCGACCGACCACCTGCTCGAGATCGTCAAGCGCGA
CCGCAAATGGAACGAGGATGGCGCGCGCAAGCAGCTTGTGCAGTTCTTCGAAGCCTGGGGCGGTGCGGACGAGGCCACCG
TCGAGGGCCGCAAACGGCTGTCGACGATTCTGTTCTCGTAG

Upstream 100 bases:

>100_bases
GCGACCGCCACTTAAAGCGATGGAAACCGTGTATTGAGGCGCGGCGGCGGCCGGTTCCGGTACGCTGTCCCATCCCAGAT
TCTTTTCGGACGAGGACCTC

Downstream 100 bases:

>100_bases
CCGTCCGGCGCGGGGACGAGGCTTCAGCGGACATCAGTGGAGCGGACACGAGGTATCGCATGCCGATCAATGCCGAATAT
CGCGGTCCTGCCGAGCTGCC

Product: putative thioredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MTIVEQGGGAAPQVPDLIKDTTTQTFVKDVIEESKRQPVLIDFWAPWCGPCKQLTPILEKAVKAAKGKVKLVKMNIDEHP
AIPGQMGIQSIPAVIAFVGGRPADGFMGAVPESQINAFIEKITKGVPGVGEPDINEILKEAEAVLAEGDPAGAAQIYAEV
LSFDAANIPALAGLARCYLETGAIEQAKETLAQVPEAKRGDSAVSAVQAAIDLAEQAQSLGPLGELEQKVAANPLDHQAR
FDLAIALNAAGKRKEATDHLLEIVKRDRKWNEDGARKQLVQFFEAWGGADEATVEGRKRLSTILFS

Sequences:

>Translated_306_residues
MTIVEQGGGAAPQVPDLIKDTTTQTFVKDVIEESKRQPVLIDFWAPWCGPCKQLTPILEKAVKAAKGKVKLVKMNIDEHP
AIPGQMGIQSIPAVIAFVGGRPADGFMGAVPESQINAFIEKITKGVPGVGEPDINEILKEAEAVLAEGDPAGAAQIYAEV
LSFDAANIPALAGLARCYLETGAIEQAKETLAQVPEAKRGDSAVSAVQAAIDLAEQAQSLGPLGELEQKVAANPLDHQAR
FDLAIALNAAGKRKEATDHLLEIVKRDRKWNEDGARKQLVQFFEAWGGADEATVEGRKRLSTILFS
>Mature_305_residues
TIVEQGGGAAPQVPDLIKDTTTQTFVKDVIEESKRQPVLIDFWAPWCGPCKQLTPILEKAVKAAKGKVKLVKMNIDEHPA
IPGQMGIQSIPAVIAFVGGRPADGFMGAVPESQINAFIEKITKGVPGVGEPDINEILKEAEAVLAEGDPAGAAQIYAEVL
SFDAANIPALAGLARCYLETGAIEQAKETLAQVPEAKRGDSAVSAVQAAIDLAEQAQSLGPLGELEQKVAANPLDHQARF
DLAIALNAAGKRKEATDHLLEIVKRDRKWNEDGARKQLVQFFEAWGGADEATVEGRKRLSTILFS

Specific function: Unknown

COG id: COG3118

COG function: function code O; Thioredoxin domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI21361403, Length=85, Percent_Identity=42.3529411764706, Blast_Score=78, Evalue=8e-15,
Organism=Homo sapiens, GI5031973, Length=104, Percent_Identity=34.6153846153846, Blast_Score=66, Evalue=4e-11,
Organism=Escherichia coli, GI87081747, Length=280, Percent_Identity=28.2142857142857, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1788936, Length=84, Percent_Identity=40.4761904761905, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI87082331, Length=107, Percent_Identity=35.5140186915888, Blast_Score=82, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI212646193, Length=101, Percent_Identity=38.6138613861386, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI28573567, Length=107, Percent_Identity=32.7102803738318, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI21358065, Length=110, Percent_Identity=32.7272727272727, Blast_Score=64, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005746
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR013766
- InterPro:   IPR012335
- InterPro:   IPR011990 [H]

Pfam domain/function: PF00085 Thioredoxin [H]

EC number: NA

Molecular weight: Translated: 32648; Mature: 32516

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS00194 THIOREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIVEQGGGAAPQVPDLIKDTTTQTFVKDVIEESKRQPVLIDFWAPWCGPCKQLTPILEK
CCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHH
AVKAAKGKVKLVKMNIDEHPAIPGQMGIQSIPAVIAFVGGRPADGFMGAVPESQINAFIE
HHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
KITKGVPGVGEPDINEILKEAEAVLAEGDPAGAAQIYAEVLSFDAANIPALAGLARCYLE
HHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
TGAIEQAKETLAQVPEAKRGDSAVSAVQAAIDLAEQAQSLGPLGELEQKVAANPLDHQAR
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHH
FDLAIALNAAGKRKEATDHLLEIVKRDRKWNEDGARKQLVQFFEAWGGADEATVEGRKRL
EEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH
STILFS
HHHHCC
>Mature Secondary Structure 
TIVEQGGGAAPQVPDLIKDTTTQTFVKDVIEESKRQPVLIDFWAPWCGPCKQLTPILEK
CEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHH
AVKAAKGKVKLVKMNIDEHPAIPGQMGIQSIPAVIAFVGGRPADGFMGAVPESQINAFIE
HHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
KITKGVPGVGEPDINEILKEAEAVLAEGDPAGAAQIYAEVLSFDAANIPALAGLARCYLE
HHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
TGAIEQAKETLAQVPEAKRGDSAVSAVQAAIDLAEQAQSLGPLGELEQKVAANPLDHQAR
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHH
FDLAIALNAAGKRKEATDHLLEIVKRDRKWNEDGARKQLVQFFEAWGGADEATVEGRKRL
EEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH
STILFS
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]