| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is hisA [H]
Identifier: 146337382
GI number: 146337382
Start: 226985
End: 227719
Strand: Direct
Name: hisA [H]
Synonym: BRADO0215
Alternate gene names: 146337382
Gene position: 226985-227719 (Clockwise)
Preceding gene: 146337381
Following gene: 146337383
Centisome position: 3.04
GC content: 66.26
Gene sequence:
>735_bases ATGATCCTGTTTCCCGCCATCGATCTGAAGAACGGCCAATGCGTGCGCCTGGAGCAGGGCGACATGGCGCGGGCCACGGT GTTCAACCTCGACCCCGCAGCCCAGGCCAAGAGCTTCGCCGATCAGGGCTTCGAATATCTCCACGTCGTCGACCTCGACG GCGCCTTCGCCGGCAAGCCGATGAACGCGCAGGCCGTCGAGGCGATGCTGAAAATCGTCAAGATGCCGGTGCAGCTCGGC GGCGGCATCCGCGATCTCAAGACCGTCGAGGCCTGGCTCGGCAAGGGCATCACCCGCGTCATCATCGGCACCGCCGCGGT GCGCGATCCCGAGCTGGTGAAGATGGCCGCGAAAGCCTTTCCCGGCCGCGTCGCCGTCGGCCTCGATGCGCGCGACGGCA AGGTCGCGGTCGAGGGCTGGGCGGAAACGTCAGAAGTGACAGCGCTCGATATTGCCAAACGTTTCGAGGACGCCGGCGTC GCGGCGATCATCTTCACCGACATCGCGCGCGACGGCTTGCTGAAGGGTTTAAATCTCGACGCCACAATCGCACTCGGTGA CGCCATCTCGATCCCCGTCATCGCCTCCGGCGGTCTCGCCTCGATCGAAGACGTCAAGGCAATGCTGACGCCGCGGGCGA GGAAGCTCGAAGGCGCCATCGCCGGCCGCGCGCTCTATGACGGGCGGCTGGATCCGGCGGAAGCGCTGGCGCTGATTCGC GCGATCAGCGGGTAG
Upstream 100 bases:
>100_bases GGTCTCGCCTTGATTTCCAACTTCCTGAAATGGAAGCCGTGAGCGCCGTCGTCCTGTTCGCCCCGGGGCGGGCAGGGCGC GCTCTTGAGAGTCACCAGAT
Downstream 100 bases:
>100_bases GGGAGAACAATATGTTCAAGGTCCGCGTCATTCCCTGCCTCGACGTCAAGGACGGCCGTGTCGTCAAGGGCGTCAACTTC GTCAATCTGCGCGACGCCGG
Product: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
Products: NA
Alternate protein names: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [H]
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MILFPAIDLKNGQCVRLEQGDMARATVFNLDPAAQAKSFADQGFEYLHVVDLDGAFAGKPMNAQAVEAMLKIVKMPVQLG GGIRDLKTVEAWLGKGITRVIIGTAAVRDPELVKMAAKAFPGRVAVGLDARDGKVAVEGWAETSEVTALDIAKRFEDAGV AAIIFTDIARDGLLKGLNLDATIALGDAISIPVIASGGLASIEDVKAMLTPRARKLEGAIAGRALYDGRLDPAEALALIR AISG
Sequences:
>Translated_244_residues MILFPAIDLKNGQCVRLEQGDMARATVFNLDPAAQAKSFADQGFEYLHVVDLDGAFAGKPMNAQAVEAMLKIVKMPVQLG GGIRDLKTVEAWLGKGITRVIIGTAAVRDPELVKMAAKAFPGRVAVGLDARDGKVAVEGWAETSEVTALDIAKRFEDAGV AAIIFTDIARDGLLKGLNLDATIALGDAISIPVIASGGLASIEDVKAMLTPRARKLEGAIAGRALYDGRLDPAEALALIR AISG >Mature_244_residues MILFPAIDLKNGQCVRLEQGDMARATVFNLDPAAQAKSFADQGFEYLHVVDLDGAFAGKPMNAQAVEAMLKIVKMPVQLG GGIRDLKTVEAWLGKGITRVIIGTAAVRDPELVKMAAKAFPGRVAVGLDARDGKVAVEGWAETSEVTALDIAKRFEDAGV AAIIFTDIARDGLLKGLNLDATIALGDAISIPVIASGGLASIEDVKAMLTPRARKLEGAIAGRALYDGRLDPAEALALIR AISG
Specific function: Histidine biosynthesis; fourth step. [C]
COG id: COG0106
COG function: function code E; Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family [H]
Homologues:
Organism=Escherichia coli, GI87082028, Length=247, Percent_Identity=35.2226720647773, Blast_Score=131, Evalue=5e-32, Organism=Escherichia coli, GI1788336, Length=248, Percent_Identity=23.7903225806452, Blast_Score=70, Evalue=9e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR006063 - InterPro: IPR023016 - InterPro: IPR011060 [H]
Pfam domain/function: PF00977 His_biosynth [H]
EC number: =5.3.1.16 [H]
Molecular weight: Translated: 25576; Mature: 25576
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILFPAIDLKNGQCVRLEQGDMARATVFNLDPAAQAKSFADQGFEYLHVVDLDGAFAGKP CEEECEEECCCCCEEEECCCCCCEEEEEECCCHHHHHHHHHCCCEEEEEEECCCCCCCCC MNAQAVEAMLKIVKMPVQLGGGIRDLKTVEAWLGKGITRVIIGTAAVRDPELVKMAAKAF CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEHHCCCCHHHHHHHHHHC PGRVAVGLDARDGKVAVEGWAETSEVTALDIAKRFEDAGVAAIIFTDIARDGLLKGLNLD CCEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHCCCCCC ATIALGDAISIPVIASGGLASIEDVKAMLTPRARKLEGAIAGRALYDGRLDPAEALALIR EEEEECCCEECCEEECCCCCHHHHHHHHHCCCHHHHHHHHHCCEEECCCCCHHHHHHHHH AISG HHCC >Mature Secondary Structure MILFPAIDLKNGQCVRLEQGDMARATVFNLDPAAQAKSFADQGFEYLHVVDLDGAFAGKP CEEECEEECCCCCEEEECCCCCCEEEEEECCCHHHHHHHHHCCCEEEEEEECCCCCCCCC MNAQAVEAMLKIVKMPVQLGGGIRDLKTVEAWLGKGITRVIIGTAAVRDPELVKMAAKAF CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEHHCCCCHHHHHHHHHHC PGRVAVGLDARDGKVAVEGWAETSEVTALDIAKRFEDAGVAAIIFTDIARDGLLKGLNLD CCEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHCCCCCC ATIALGDAISIPVIASGGLASIEDVKAMLTPRARKLEGAIAGRALYDGRLDPAEALALIR EEEEECCCEECCEEECCCCCHHHHHHHHHCCCHHHHHHHHHCCEEECCCCCHHHHHHHHH AISG HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA