Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

Click here to switch to the map view.

The map label for this gene is 146337349

Identifier: 146337349

GI number: 146337349

Start: 194022

End: 194438

Strand: Reverse

Name: 146337349

Synonym: BRADO0182

Alternate gene names: NA

Gene position: 194438-194022 (Counterclockwise)

Preceding gene: 146337350

Following gene: 146337344

Centisome position: 2.61

GC content: 66.91

Gene sequence:

>417_bases
TTGGAGCGCGTCCCGACCCTGCGTCTATTGGGAAGCGATTCGCTGCGGATGATCGCGATCGGCTCCGAGCAGCGTAACAT
CCAGAGCGGCGAGACCTTGTTTCGCGAGGGCGACACGGCCGATTGCGGCTATGTCGTCCAGCGCGGCGCGTTGCGCATCA
GCGACGAGGTCGGCGCCGAGATCATTGCCAAGCCCAGCATGCTGATCGGCGAGCTGGCGCTGCTTGTGGAGATGCGCCGC
CCGGCGACGGCGACCGCGCTGGAATATTCCACCGTGGTACGGATCTCGCGCAGCCTGTTCCAGCGCGTGCTGGAGAGTGA
CGCCGTTGCCGCCCGCCGCCTGCGCGACGAGTTCGCCCACCGCGCCAACCGCATCGCCAACGACATCCTGATGGCCGGCG
CCAAGCTGATGTCGTGA

Upstream 100 bases:

>100_bases
GCCGTGATACGGTCGGGGATTGGCGGTTTGCCGTCTATGATATTGGTTCCATTTCGCCTTCCCCGGGCCCTCGATGTCAA
TCGAAGACGATATTGCGCTG

Downstream 100 bases:

>100_bases
CGGGGGATGGTTTCCCTCGATTCTAGTACCCGGGTCGTCATGCCCGGTCTTGTCCTGGACGATGCCCGGCCATGACGGCG
TGGAGGCGGGTGAACAAATA

Product: putative cyclic nucleotide binding protein

Products: NA

Alternate protein names: Crp/Fnr Family Transcriptional Regulator; Transcriptional Regulator Crp/Fnr Family

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MERVPTLRLLGSDSLRMIAIGSEQRNIQSGETLFREGDTADCGYVVQRGALRISDEVGAEIIAKPSMLIGELALLVEMRR
PATATALEYSTVVRISRSLFQRVLESDAVAARRLRDEFAHRANRIANDILMAGAKLMS

Sequences:

>Translated_138_residues
MERVPTLRLLGSDSLRMIAIGSEQRNIQSGETLFREGDTADCGYVVQRGALRISDEVGAEIIAKPSMLIGELALLVEMRR
PATATALEYSTVVRISRSLFQRVLESDAVAARRLRDEFAHRANRIANDILMAGAKLMS
>Mature_138_residues
MERVPTLRLLGSDSLRMIAIGSEQRNIQSGETLFREGDTADCGYVVQRGALRISDEVGAEIIAKPSMLIGELALLVEMRR
PATATALEYSTVVRISRSLFQRVLESDAVAARRLRDEFAHRANRIANDILMAGAKLMS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15218; Mature: 15218

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: PS50042 CNMP_BINDING_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERVPTLRLLGSDSLRMIAIGSEQRNIQSGETLFREGDTADCGYVVQRGALRISDEVGAE
CCCCCEEEEECCCCEEEEEECCCCCCCCCCHHHHHCCCCCCHHHHHHCCCEEECHHHCHH
IIAKPSMLIGELALLVEMRRPATATALEYSTVVRISRSLFQRVLESDAVAARRLRDEFAH
HHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RANRIANDILMAGAKLMS
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MERVPTLRLLGSDSLRMIAIGSEQRNIQSGETLFREGDTADCGYVVQRGALRISDEVGAE
CCCCCEEEEECCCCEEEEEECCCCCCCCCCHHHHHCCCCCCHHHHHHCCCEEECHHHCHH
IIAKPSMLIGELALLVEMRRPATATALEYSTVVRISRSLFQRVLESDAVAARRLRDEFAH
HHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RANRIANDILMAGAKLMS
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA