Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146337344
Identifier: 146337344
GI number: 146337344
Start: 188799
End: 190058
Strand: Reverse
Name: 146337344
Synonym: BRADO0177
Alternate gene names: NA
Gene position: 190058-188799 (Counterclockwise)
Preceding gene: 146337349
Following gene: 146337340
Centisome position: 2.55
GC content: 70.32
Gene sequence:
>1260_bases GTGCGAATGGGGAACTTCTGGCCGGTGACGGCCGAGCGAAGAGATGCCATGACTGGCCCGCGTCATCCCAAGCCAGATGC CAAGCCGGGAGCCCCCATGGTTGCCCGGCGGACGGCGCTTGGCCTGATCCTCGGCGCGCCGCTGGTGTCGGCCTGCTCCA ATGTGCAGCAGGGATTCAATCCGTTCGAGCAGCCGACCGCGCCGTCCGGTCCGCCGCAGCAGCCCGCCGTGGCCGGCAAT GGCCAGGTGAAGGTCGGGCTGATCCTGCCGCTGTCGGCCTCCGGAAACGCCGGCGTCGCGGCGCAGTCGATGAAGAACGC GGCCGAGATGGCGCTCGCCGAGTTTCAGAACCCCAACATCCAGCTCTTGATCAAGGACGACGCCGGCAGCCCCCAAGGTG CACAACAAGGTGCGCAACAGGCCTGCGACGAGGGCGCCGAGATCCTGCTCGGCCCGCTATTCGCGGGCTCGGTCCCGGCA ACGTCCCAGGTGGCGCGCACGCGCAACATCTCGGTCATCGCTTTCTCGACGGATTCCAGCGTCGCCGGGCGCGGCGTCTA TCTGCTCAGCTTCCTCCCGGAGTCCGATGCCAGCCGCATCGTCGACTACTCGGCCAGCGTCGGCAAACGGTCGTTCGCGG CGCTGCTGCCGGACAATCCCTACGGCACCGTGGTGGAAGGGGCGTTCAAGACCGCGGTCAGCCGGCGCGGCGGACGCATC GTGGCGTTCGAGAAATATGCCGGCGACCGCACCGCGGCGGCGCGCGCGGTCGCGCAGTCGCTCGGTGGTGCCGATGCCCT GCTGCTGGCCGATGATGGCGAGTCGGTCGTTGCGACCGCGGACGCGCTCACGGCCGCCGGCGCCAATCTGCGCAACATCC AGCTGCTCGGTACCGGGCTGTGGGACAATCCGCGCGTCTACAACAGCGCCAGCCTGCAGGGCGGCCTCTATGCGGCGCCG GATCCCTCGGGCTTCCGCGCCTTTGCCGGTCGCTATCGCACGCGCTTCGGCGGCGATCCCGTGCGCACCGCGACCTTGGC CTACGACGCGGTGGCGCTGGTCGCCGCGCTCGCGCGCACCCAGGGCGCGCAGCGCTTCGCGCCTGACGTGCTCACCAATG CCTCCGGCTTTGCCGGCATCGACGGCCTCTTCCGCTTCCGCAGCGACGGCACCAATGAGCGCGGGCTAGCCGTGATGCGC GTCGGCTCGGGCGGCGGACAGGCGGTGGCCGGCGCGCCGAAGAGCTTCAGCGCGACGTAG
Upstream 100 bases:
>100_bases GTGTAAAACGTCGATTTGATCGCAGGTGTGGCCCTGACAGCCTTTTGTTTTGCTTAACTATTCGTCGACAATATGAGTCA AATCGCACAGGCCTCGGGGC
Downstream 100 bases:
>100_bases ATCGTTCAGCGTGGCTGGTTCGGCGGTCGGGGCAATCTCGTACCTCACGGAATGCTGCTGCTCCTCACCCTGAGGAGCCC GCCAAAGGCGGGCATCTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 419; Mature: 419
Protein sequence:
>419_residues MRMGNFWPVTAERRDAMTGPRHPKPDAKPGAPMVARRTALGLILGAPLVSACSNVQQGFNPFEQPTAPSGPPQQPAVAGN GQVKVGLILPLSASGNAGVAAQSMKNAAEMALAEFQNPNIQLLIKDDAGSPQGAQQGAQQACDEGAEILLGPLFAGSVPA TSQVARTRNISVIAFSTDSSVAGRGVYLLSFLPESDASRIVDYSASVGKRSFAALLPDNPYGTVVEGAFKTAVSRRGGRI VAFEKYAGDRTAAARAVAQSLGGADALLLADDGESVVATADALTAAGANLRNIQLLGTGLWDNPRVYNSASLQGGLYAAP DPSGFRAFAGRYRTRFGGDPVRTATLAYDAVALVAALARTQGAQRFAPDVLTNASGFAGIDGLFRFRSDGTNERGLAVMR VGSGGGQAVAGAPKSFSAT
Sequences:
>Translated_419_residues MRMGNFWPVTAERRDAMTGPRHPKPDAKPGAPMVARRTALGLILGAPLVSACSNVQQGFNPFEQPTAPSGPPQQPAVAGN GQVKVGLILPLSASGNAGVAAQSMKNAAEMALAEFQNPNIQLLIKDDAGSPQGAQQGAQQACDEGAEILLGPLFAGSVPA TSQVARTRNISVIAFSTDSSVAGRGVYLLSFLPESDASRIVDYSASVGKRSFAALLPDNPYGTVVEGAFKTAVSRRGGRI VAFEKYAGDRTAAARAVAQSLGGADALLLADDGESVVATADALTAAGANLRNIQLLGTGLWDNPRVYNSASLQGGLYAAP DPSGFRAFAGRYRTRFGGDPVRTATLAYDAVALVAALARTQGAQRFAPDVLTNASGFAGIDGLFRFRSDGTNERGLAVMR VGSGGGQAVAGAPKSFSAT >Mature_419_residues MRMGNFWPVTAERRDAMTGPRHPKPDAKPGAPMVARRTALGLILGAPLVSACSNVQQGFNPFEQPTAPSGPPQQPAVAGN GQVKVGLILPLSASGNAGVAAQSMKNAAEMALAEFQNPNIQLLIKDDAGSPQGAQQGAQQACDEGAEILLGPLFAGSVPA TSQVARTRNISVIAFSTDSSVAGRGVYLLSFLPESDASRIVDYSASVGKRSFAALLPDNPYGTVVEGAFKTAVSRRGGRI VAFEKYAGDRTAAARAVAQSLGGADALLLADDGESVVATADALTAAGANLRNIQLLGTGLWDNPRVYNSASLQGGLYAAP DPSGFRAFAGRYRTRFGGDPVRTATLAYDAVALVAALARTQGAQRFAPDVLTNASGFAGIDGLFRFRSDGTNERGLAVMR VGSGGGQAVAGAPKSFSAT
Specific function: Unknown
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42993; Mature: 42993
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMGNFWPVTAERRDAMTGPRHPKPDAKPGAPMVARRTALGLILGAPLVSACSNVQQGFN CCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC PFEQPTAPSGPPQQPAVAGNGQVKVGLILPLSASGNAGVAAQSMKNAAEMALAEFQNPNI CCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCE QLLIKDDAGSPQGAQQGAQQACDEGAEILLGPLFAGSVPATSQVARTRNISVIAFSTDSS EEEEECCCCCCCHHHHHHHHHHHCCCCEEEEHHHCCCCCCHHHHHHHCCEEEEEEECCCC VAGRGVYLLSFLPESDASRIVDYSASVGKRSFAALLPDNPYGTVVEGAFKTAVSRRGGRI CCCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEE VAFEKYAGDRTAAARAVAQSLGGADALLLADDGESVVATADALTAAGANLRNIQLLGTGL EEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCEEEEHHHHHHCCCCCEEEEEEECCC WDNPRVYNSASLQGGLYAAPDPSGFRAFAGRYRTRFGGDPVRTATLAYDAVALVAALART CCCCCEECCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH QGAQRFAPDVLTNASGFAGIDGLFRFRSDGTNERGLAVMRVGSGGGQAVAGAPKSFSAT CCCHHHCCHHHCCCCCCCCHHHHHHCCCCCCCCCCEEEEEECCCCCCEECCCCCCCCCC >Mature Secondary Structure MRMGNFWPVTAERRDAMTGPRHPKPDAKPGAPMVARRTALGLILGAPLVSACSNVQQGFN CCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC PFEQPTAPSGPPQQPAVAGNGQVKVGLILPLSASGNAGVAAQSMKNAAEMALAEFQNPNI CCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCE QLLIKDDAGSPQGAQQGAQQACDEGAEILLGPLFAGSVPATSQVARTRNISVIAFSTDSS EEEEECCCCCCCHHHHHHHHHHHCCCCEEEEHHHCCCCCCHHHHHHHCCEEEEEEECCCC VAGRGVYLLSFLPESDASRIVDYSASVGKRSFAALLPDNPYGTVVEGAFKTAVSRRGGRI CCCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEE VAFEKYAGDRTAAARAVAQSLGGADALLLADDGESVVATADALTAAGANLRNIQLLGTGL EEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCEEEEHHHHHHCCCCCEEEEEEECCC WDNPRVYNSASLQGGLYAAPDPSGFRAFAGRYRTRFGGDPVRTATLAYDAVALVAALART CCCCCEECCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH QGAQRFAPDVLTNASGFAGIDGLFRFRSDGTNERGLAVMRVGSGGGQAVAGAPKSFSAT CCCHHHCCHHHCCCCCCCCHHHHHHCCCCCCCCCCEEEEEECCCCCCEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA