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The map label for this gene is ytfH [C]

Identifier: 146301727

GI number: 146301727

Start: 4772687

End: 4773064

Strand: Direct

Name: ytfH [C]

Synonym: Fjoh_3989

Alternate gene names: 146301727

Gene position: 4772687-4773064 (Clockwise)

Preceding gene: 146301721

Following gene: 146301736

Centisome position: 78.28

GC content: 37.3

Gene sequence:

>378_bases
ATGGCAAAAATTAATGATAACGGTGTACTTCGAGAAGCGAATTGTTCTGAAGAACTTATGGCAATGCGTGACAGCCTTGA
CGTTTTAGGCGGAAAATGGAAATTGATGATTCTAAGATTTTTAACTAACCGAACTCATCAGGTTATTCATTTTAAAAAAA
TGCAGCGTGAAATTGACGGTATTTCGGCTAAAATGCTCAGCAAGGAACTTAAAGAACTTGAAACTAATCTGCTTATTACA
AGAACCGAACAAGATACCAAACCCGCAACCGTAATTTATGCCATTACCGAATATGGAAAATCAGTGCTTCCGGTTACAGA
AACCTTAGTTAACTGGGGATTGGCACACCGGGAAAAGATTATCGAATCACTTAAATAA

Upstream 100 bases:

>100_bases
GCTTTCATTTTTATCGTTTTAGTTTACAAAAGTATCGCCGTAATACTTTATTTTTGTTATGGGTTAACCCAAGGTAACCG
GTTACCAAAGAGAAACTAGT

Downstream 100 bases:

>100_bases
TTCTAAAAAACATTCCGTTGGAAATGTTTGGTCGGTAGAACAAAAATTGAATTTTGGTTACACGTTCCATAGGAACGTTT
GATGAATGACGTAAATATCA

Product: HxlR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 124

Protein sequence:

>125_residues
MAKINDNGVLREANCSEELMAMRDSLDVLGGKWKLMILRFLTNRTHQVIHFKKMQREIDGISAKMLSKELKELETNLLIT
RTEQDTKPATVIYAITEYGKSVLPVTETLVNWGLAHREKIIESLK

Sequences:

>Translated_125_residues
MAKINDNGVLREANCSEELMAMRDSLDVLGGKWKLMILRFLTNRTHQVIHFKKMQREIDGISAKMLSKELKELETNLLIT
RTEQDTKPATVIYAITEYGKSVLPVTETLVNWGLAHREKIIESLK
>Mature_124_residues
AKINDNGVLREANCSEELMAMRDSLDVLGGKWKLMILRFLTNRTHQVIHFKKMQREIDGISAKMLSKELKELETNLLITR
TEQDTKPATVIYAITEYGKSVLPVTETLVNWGLAHREKIIESLK

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 14342; Mature: 14211

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKINDNGVLREANCSEELMAMRDSLDVLGGKWKLMILRFLTNRTHQVIHFKKMQREIDG
CCEECCCCCEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
ISAKMLSKELKELETNLLITRTEQDTKPATVIYAITEYGKSVLPVTETLVNWGLAHREKI
HHHHHHHHHHHHHHHCEEEEECCCCCCCHHEEEEEHHHCCCCCHHHHHHHHHCHHHHHHH
IESLK
HHHCC
>Mature Secondary Structure 
AKINDNGVLREANCSEELMAMRDSLDVLGGKWKLMILRFLTNRTHQVIHFKKMQREIDG
CEECCCCCEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
ISAKMLSKELKELETNLLITRTEQDTKPATVIYAITEYGKSVLPVTETLVNWGLAHREKI
HHHHHHHHHHHHHHHCEEEEECCCCCCCHHEEEEEHHHCCCCCHHHHHHHHHCHHHHHHH
IESLK
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10086842; 11058132 [H]