| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301721
Identifier: 146301721
GI number: 146301721
Start: 4767098
End: 4768246
Strand: Direct
Name: 146301721
Synonym: Fjoh_3983
Alternate gene names: NA
Gene position: 4767098-4768246 (Clockwise)
Preceding gene: 146301719
Following gene: 146301727
Centisome position: 78.19
GC content: 29.42
Gene sequence:
>1149_bases ATGGGAAACTTACTTCAAAACACCATTTTTGGTCAAAATAAATATAAACCTAATACTTTTATTGGAGGAGTTGGTAACAC TTTAAACACTTCTGCTTTAATTGCTTCTAAACTTGGTATATCAGTTAATAGAATCAAATCTTTTAGTGTTGTTGGAAATG ATATTCAATTTAATGTGACTGGAGGAAATTACGTATTAGCTGGAAGTGCATTTTATGGAAATACAGATATCACCTATTTT AATGATACACTTGGATTAATCACTGATTGTCCTTTTGGAAATGCTTTTTATTTAGCATCAAATTTAAATTGGGTCAGACT TCCTGGAATGATCAAGTTAGGTTATAGATCTTTTTGTGAATGTGTAAACTTGGAAACAATATATTTCAATTCCCTTCTAG AGGTCAGCTCAGAAAGTTTTACTAATTGCAGGAAGCTTATTAATTTAAATAATAGCTTTAAAACTGTAACTACATTAGGC AATATGTGTTTCCAAAATTGTACACTTATTACAGATTTACATTTCCCAAATGTGAGTCTATGTAATTTAAACGCTTCTAC AACTATGTTCAGTGGAATGTCATCCTTAGTCACGTTTAATGCGCCTAATCTAACATTGATAGCAAACGGCAGTAATGGGC ACAATATGTTTTTCAATTGCATCAATTTAGAGAATATCAATCTTACAGCTTTGAATTTTATTCCGCAAAATTTTGTTCTA AATTGCGTAAAATTAAAAACATTAAACCTGCCAAATGCAGTTATTGGAAATTTATTAACATCATTTTCTAATACTCCACT GCTTGAAACACTCAATACTCCAAATCTAGAAACTTTAATAACAAATAGTTACAGGGCATTTTATCAATGTGGAGTTAAAA ATATTGATTTTTCAAAAATTACTAATTTAAGTATATTATCAAATGATATTTTCGAGAATACAACTGGATTACAAACAATT GATATTAGATCTTGTACAACTTCAATTGGATCTAGCGCTTCTGTAAATAATAATGTATTTCGTCTTATGAAAACTGGAGT TATTATTACTGCAAATGTAATTCAACAGACAATTAATTCAGGAGTACCTGAACCAGATCTTGCATATGCAATTTCAAACA GAAGTGCTACTGTAAACTATATAGAATAG
Upstream 100 bases:
>100_bases TACCTTGCAAATCTGTTCAAGTTCTGTACACTTCTTTTTATATGATAATATTATAATCAATTTTTGTTAAATATAATTTT AAAAATATAAAAACAACTAT
Downstream 100 bases:
>100_bases ATTTGATTAAGAAAATAAATCAAACTTATATAAAAAATAAAAGACCTTTTGAAGGTCTTTTATTTTTCTAATCTATTACC ACCCTTTTACAGCACCGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 382; Mature: 381
Protein sequence:
>382_residues MGNLLQNTIFGQNKYKPNTFIGGVGNTLNTSALIASKLGISVNRIKSFSVVGNDIQFNVTGGNYVLAGSAFYGNTDITYF NDTLGLITDCPFGNAFYLASNLNWVRLPGMIKLGYRSFCECVNLETIYFNSLLEVSSESFTNCRKLINLNNSFKTVTTLG NMCFQNCTLITDLHFPNVSLCNLNASTTMFSGMSSLVTFNAPNLTLIANGSNGHNMFFNCINLENINLTALNFIPQNFVL NCVKLKTLNLPNAVIGNLLTSFSNTPLLETLNTPNLETLITNSYRAFYQCGVKNIDFSKITNLSILSNDIFENTTGLQTI DIRSCTTSIGSSASVNNNVFRLMKTGVIITANVIQQTINSGVPEPDLAYAISNRSATVNYIE
Sequences:
>Translated_382_residues MGNLLQNTIFGQNKYKPNTFIGGVGNTLNTSALIASKLGISVNRIKSFSVVGNDIQFNVTGGNYVLAGSAFYGNTDITYF NDTLGLITDCPFGNAFYLASNLNWVRLPGMIKLGYRSFCECVNLETIYFNSLLEVSSESFTNCRKLINLNNSFKTVTTLG NMCFQNCTLITDLHFPNVSLCNLNASTTMFSGMSSLVTFNAPNLTLIANGSNGHNMFFNCINLENINLTALNFIPQNFVL NCVKLKTLNLPNAVIGNLLTSFSNTPLLETLNTPNLETLITNSYRAFYQCGVKNIDFSKITNLSILSNDIFENTTGLQTI DIRSCTTSIGSSASVNNNVFRLMKTGVIITANVIQQTINSGVPEPDLAYAISNRSATVNYIE >Mature_381_residues GNLLQNTIFGQNKYKPNTFIGGVGNTLNTSALIASKLGISVNRIKSFSVVGNDIQFNVTGGNYVLAGSAFYGNTDITYFN DTLGLITDCPFGNAFYLASNLNWVRLPGMIKLGYRSFCECVNLETIYFNSLLEVSSESFTNCRKLINLNNSFKTVTTLGN MCFQNCTLITDLHFPNVSLCNLNASTTMFSGMSSLVTFNAPNLTLIANGSNGHNMFFNCINLENINLTALNFIPQNFVLN CVKLKTLNLPNAVIGNLLTSFSNTPLLETLNTPNLETLITNSYRAFYQCGVKNIDFSKITNLSILSNDIFENTTGLQTID IRSCTTSIGSSASVNNNVFRLMKTGVIITANVIQQTINSGVPEPDLAYAISNRSATVNYIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41750; Mature: 41619
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNLLQNTIFGQNKYKPNTFIGGVGNTLNTSALIASKLGISVNRIKSFSVVGNDIQFNVT CCCHHHHHHCCCCCCCCCCEECCCCCCCCHHHHHHHHHCCCHHHEEEEEEECCCEEEEEE GGNYVLAGSAFYGNTDITYFNDTLGLITDCPFGNAFYLASNLNWVRLPGMIKLGYRSFCE CCCEEEEECEEECCCCEEEEECCCCEEECCCCCCEEEEECCCCEEECCCEEECCHHHHHH CVNLETIYFNSLLEVSSESFTNCRKLINLNNSFKTVTTLGNMCFQNCTLITDLHFPNVSL HCCCCCEEHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEEEECCCCEEE CNLNASTTMFSGMSSLVTFNAPNLTLIANGSNGHNMFFNCINLENINLTALNFIPQNFVL EECCCHHHHHHCCHHEEEECCCCEEEEEECCCCCEEEEEEEEECCCCEEEEEECCCCHHE NCVKLKTLNLPNAVIGNLLTSFSNTPLLETLNTPNLETLITNSYRAFYQCGVKNIDFSKI EEEEEEEECCCHHHHHHHHHHCCCCCEEEECCCCCHHEEEECCHHHHHHCCCCCCCHHHC TNLSILSNDIFENTTGLQTIDIRSCTTSIGSSASVNNNVFRLMKTGVIITANVIQQTINS CCEEEEHHHHHCCCCCCEEEEEHHHHHCCCCCCCCCCHHHEEECCCEEEEHHHHHHHHHC GVPEPDLAYAISNRSATVNYIE CCCCCCCEEEECCCCCEEEEEC >Mature Secondary Structure GNLLQNTIFGQNKYKPNTFIGGVGNTLNTSALIASKLGISVNRIKSFSVVGNDIQFNVT CCHHHHHHCCCCCCCCCCEECCCCCCCCHHHHHHHHHCCCHHHEEEEEEECCCEEEEEE GGNYVLAGSAFYGNTDITYFNDTLGLITDCPFGNAFYLASNLNWVRLPGMIKLGYRSFCE CCCEEEEECEEECCCCEEEEECCCCEEECCCCCCEEEEECCCCEEECCCEEECCHHHHHH CVNLETIYFNSLLEVSSESFTNCRKLINLNNSFKTVTTLGNMCFQNCTLITDLHFPNVSL HCCCCCEEHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEEEECCCCEEE CNLNASTTMFSGMSSLVTFNAPNLTLIANGSNGHNMFFNCINLENINLTALNFIPQNFVL EECCCHHHHHHCCHHEEEECCCCEEEEEECCCCCEEEEEEEEECCCCEEEEEECCCCHHE NCVKLKTLNLPNAVIGNLLTSFSNTPLLETLNTPNLETLITNSYRAFYQCGVKNIDFSKI EEEEEEEECCCHHHHHHHHHHCCCCCEEEECCCCCHHEEEECCHHHHHHCCCCCCCHHHC TNLSILSNDIFENTTGLQTIDIRSCTTSIGSSASVNNNVFRLMKTGVIITANVIQQTINS CCEEEEHHHHHCCCCCCEEEEEHHHHHCCCCCCCCCCHHHEEECCCEEEEHHHHHHHHHC GVPEPDLAYAISNRSATVNYIE CCCCCCCEEEECCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA