| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301736
Identifier: 146301736
GI number: 146301736
Start: 4780723
End: 4781124
Strand: Direct
Name: 146301736
Synonym: Fjoh_3998
Alternate gene names: NA
Gene position: 4780723-4781124 (Clockwise)
Preceding gene: 146301727
Following gene: 146301737
Centisome position: 78.41
GC content: 31.84
Gene sequence:
>402_bases ATGAATGCAAAAACAACAAAAATTATTTATTGGACAGGAATTATTTTAACTTCTTTATGGTTTGGTGCCAGCGGATTTTT TGAATTGACAACAAACAAATTAGTTTGGGAAATCACACAACTTTTAGGTTATCCTGCACATTTTATTTACATCCTGGGTG TTATGAAGGTTTCTGGAGTTATCACCTTATTAATTCCTAACAAATTATTACGATTAAAAGAATGGGTATTTGCGGGCGTA TTTTTTGACATCATCTTTGCTTTCTTTTCAAAACTGGTTGTCTTAGGTTTCCCCGCAACTGTTGATGCCATTATTGCTTT TGTAATGGTAAGTGTTACTTATATCATGTTTAGAAAATTATACAGCGTAACTTATAAGGCAAGAGTTCTTGAGGAAAATT AA
Upstream 100 bases:
>100_bases TATTTCGCATTTCAATTTGTCCGTTTCACCAAAATACCAATATGAAATCGACTGCCGTTGACGCAATTTTGTCCTGTTTA ACAACTTAAAATTTAAAATC
Downstream 100 bases:
>100_bases GATGTCTTATTTAATCTCACAATCCCGATAGTTATCCGGGAACAAAGTTTTATTTCACGCAGATTAAGCAGATTGGGCAG ATTTTTAAAAATAGCTGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MNAKTTKIIYWTGIILTSLWFGASGFFELTTNKLVWEITQLLGYPAHFIYILGVMKVSGVITLLIPNKLLRLKEWVFAGV FFDIIFAFFSKLVVLGFPATVDAIIAFVMVSVTYIMFRKLYSVTYKARVLEEN
Sequences:
>Translated_133_residues MNAKTTKIIYWTGIILTSLWFGASGFFELTTNKLVWEITQLLGYPAHFIYILGVMKVSGVITLLIPNKLLRLKEWVFAGV FFDIIFAFFSKLVVLGFPATVDAIIAFVMVSVTYIMFRKLYSVTYKARVLEEN >Mature_133_residues MNAKTTKIIYWTGIILTSLWFGASGFFELTTNKLVWEITQLLGYPAHFIYILGVMKVSGVITLLIPNKLLRLKEWVFAGV FFDIIFAFFSKLVVLGFPATVDAIIAFVMVSVTYIMFRKLYSVTYKARVLEEN
Specific function: Unknown
COG id: COG2259
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15204; Mature: 15204
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAKTTKIIYWTGIILTSLWFGASGFFELTTNKLVWEITQLLGYPAHFIYILGVMKVSGV CCCCCEEEEEHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC ITLLIPNKLLRLKEWVFAGVFFDIIFAFFSKLVVLGFPATVDAIIAFVMVSVTYIMFRKL CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH YSVTYKARVLEEN HHHHHHHHEECCC >Mature Secondary Structure MNAKTTKIIYWTGIILTSLWFGASGFFELTTNKLVWEITQLLGYPAHFIYILGVMKVSGV CCCCCEEEEEHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC ITLLIPNKLLRLKEWVFAGVFFDIIFAFFSKLVVLGFPATVDAIIAFVMVSVTYIMFRKL CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH YSVTYKARVLEEN HHHHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA