Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146301736

Identifier: 146301736

GI number: 146301736

Start: 4780723

End: 4781124

Strand: Direct

Name: 146301736

Synonym: Fjoh_3998

Alternate gene names: NA

Gene position: 4780723-4781124 (Clockwise)

Preceding gene: 146301727

Following gene: 146301737

Centisome position: 78.41

GC content: 31.84

Gene sequence:

>402_bases
ATGAATGCAAAAACAACAAAAATTATTTATTGGACAGGAATTATTTTAACTTCTTTATGGTTTGGTGCCAGCGGATTTTT
TGAATTGACAACAAACAAATTAGTTTGGGAAATCACACAACTTTTAGGTTATCCTGCACATTTTATTTACATCCTGGGTG
TTATGAAGGTTTCTGGAGTTATCACCTTATTAATTCCTAACAAATTATTACGATTAAAAGAATGGGTATTTGCGGGCGTA
TTTTTTGACATCATCTTTGCTTTCTTTTCAAAACTGGTTGTCTTAGGTTTCCCCGCAACTGTTGATGCCATTATTGCTTT
TGTAATGGTAAGTGTTACTTATATCATGTTTAGAAAATTATACAGCGTAACTTATAAGGCAAGAGTTCTTGAGGAAAATT
AA

Upstream 100 bases:

>100_bases
TATTTCGCATTTCAATTTGTCCGTTTCACCAAAATACCAATATGAAATCGACTGCCGTTGACGCAATTTTGTCCTGTTTA
ACAACTTAAAATTTAAAATC

Downstream 100 bases:

>100_bases
GATGTCTTATTTAATCTCACAATCCCGATAGTTATCCGGGAACAAAGTTTTATTTCACGCAGATTAAGCAGATTGGGCAG
ATTTTTAAAAATAGCTGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MNAKTTKIIYWTGIILTSLWFGASGFFELTTNKLVWEITQLLGYPAHFIYILGVMKVSGVITLLIPNKLLRLKEWVFAGV
FFDIIFAFFSKLVVLGFPATVDAIIAFVMVSVTYIMFRKLYSVTYKARVLEEN

Sequences:

>Translated_133_residues
MNAKTTKIIYWTGIILTSLWFGASGFFELTTNKLVWEITQLLGYPAHFIYILGVMKVSGVITLLIPNKLLRLKEWVFAGV
FFDIIFAFFSKLVVLGFPATVDAIIAFVMVSVTYIMFRKLYSVTYKARVLEEN
>Mature_133_residues
MNAKTTKIIYWTGIILTSLWFGASGFFELTTNKLVWEITQLLGYPAHFIYILGVMKVSGVITLLIPNKLLRLKEWVFAGV
FFDIIFAFFSKLVVLGFPATVDAIIAFVMVSVTYIMFRKLYSVTYKARVLEEN

Specific function: Unknown

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15204; Mature: 15204

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAKTTKIIYWTGIILTSLWFGASGFFELTTNKLVWEITQLLGYPAHFIYILGVMKVSGV
CCCCCEEEEEHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
ITLLIPNKLLRLKEWVFAGVFFDIIFAFFSKLVVLGFPATVDAIIAFVMVSVTYIMFRKL
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
YSVTYKARVLEEN
HHHHHHHHEECCC
>Mature Secondary Structure
MNAKTTKIIYWTGIILTSLWFGASGFFELTTNKLVWEITQLLGYPAHFIYILGVMKVSGV
CCCCCEEEEEHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
ITLLIPNKLLRLKEWVFAGVFFDIIFAFFSKLVVLGFPATVDAIIAFVMVSVTYIMFRKL
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
YSVTYKARVLEEN
HHHHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA