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The map label for this gene is hxlR [H]

Identifier: 146301587

GI number: 146301587

Start: 4561459

End: 4561824

Strand: Reverse

Name: hxlR [H]

Synonym: Fjoh_3848

Alternate gene names: 146301587

Gene position: 4561824-4561459 (Counterclockwise)

Preceding gene: 146301590

Following gene: 146301585

Centisome position: 74.82

GC content: 38.52

Gene sequence:

>366_bases
ATGTATGAAAGAAAAACAACCCCAAACTTAAATTGCGGTCTTGACCTGATAGGTGAAGTACTTTACGGTAAATGGAAAAT
ACGTTTGCTCTGGTTTATAAACGAGGGACACAAACGACCAAGTGAATTACAGCGTAAAATACCAGATGCTTCTCGCCGGG
TTTTGAATATTCAGCTCAAGGAATTGGAGGAACATGAACTTGTTTCAAAAATTATATATCCTGTTGTGCCTCCAAAAGTA
GAGTACAGCCTGACTGATTTTGGGAAAACATTAATTCCTGTAATTTCTGCAATTGGGAATTGGGGAGATGAGCATGAGGC
GCGTTTACGAACGTTAATTTTGAGACGTTTAGACTCAAACCAATAA

Upstream 100 bases:

>100_bases
CCGAAGTACGTTAGTTCCTCACAAGTACGGAGTTACGATTCATATAGGGATAAATTTTTCCCCTATTGCACGGATTGGGA
TATACGTTTAAATTTGCAAT

Downstream 100 bases:

>100_bases
TATATAATTTGAGAGCTGCATCAATCTAAATAAAAAATGCTAAATCACATGATTTAGCATTTTAATTATATCAAATTATC
GTAATTTAATATTTAATGAT

Product: HxlR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MYERKTTPNLNCGLDLIGEVLYGKWKIRLLWFINEGHKRPSELQRKIPDASRRVLNIQLKELEEHELVSKIIYPVVPPKV
EYSLTDFGKTLIPVISAIGNWGDEHEARLRTLILRRLDSNQ

Sequences:

>Translated_121_residues
MYERKTTPNLNCGLDLIGEVLYGKWKIRLLWFINEGHKRPSELQRKIPDASRRVLNIQLKELEEHELVSKIIYPVVPPKV
EYSLTDFGKTLIPVISAIGNWGDEHEARLRTLILRRLDSNQ
>Mature_121_residues
MYERKTTPNLNCGLDLIGEVLYGKWKIRLLWFINEGHKRPSELQRKIPDASRRVLNIQLKELEEHELVSKIIYPVVPPKV
EYSLTDFGKTLIPVISAIGNWGDEHEARLRTLILRRLDSNQ

Specific function: Positive regulator of hxlAB expression [H]

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=79, Percent_Identity=39.2405063291139, Blast_Score=66, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 14133; Mature: 14133

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYERKTTPNLNCGLDLIGEVLYGKWKIRLLWFINEGHKRPSELQRKIPDASRRVLNIQLK
CCCCCCCCCCCCCHHHHHHHHHCCEEEEEEEEECCCCCCHHHHHHHCCHHHHHHHHHHHH
ELEEHELVSKIIYPVVPPKVEYSLTDFGKTLIPVISAIGNWGDEHEARLRTLILRRLDSN
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
Q
C
>Mature Secondary Structure
MYERKTTPNLNCGLDLIGEVLYGKWKIRLLWFINEGHKRPSELQRKIPDASRRVLNIQLK
CCCCCCCCCCCCCHHHHHHHHHCCEEEEEEEEECCCCCCHHHHHHHCCHHHHHHHHHHHH
ELEEHELVSKIIYPVVPPKVEYSLTDFGKTLIPVISAIGNWGDEHEARLRTLILRRLDSN
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
Q
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704255; 8969502; 9384377; 1715856 [H]