Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is ppk [H]

Identifier: 146301590

GI number: 146301590

Start: 4563165

End: 4565186

Strand: Reverse

Name: ppk [H]

Synonym: Fjoh_3851

Alternate gene names: 146301590

Gene position: 4565186-4563165 (Counterclockwise)

Preceding gene: 146301591

Following gene: 146301587

Centisome position: 74.88

GC content: 29.77

Gene sequence:

>2022_bases
GTGCAAAACTATCTTATTCCTTCAGAAATATCTTGGCTTTCTTTCAATAATTGTATTTTGGATGAAGCAGAAGACTTAAA
TAATGCAGTATATGACAGAATTAAATTTTTGGCTATACATTCCTCTAATCTGGATGAGTTTTTCAGGGTTAAAATAAATA
AACTCCTAAAAAAGAAAACTAAGAAAAGCAGTGACCTTCTGGAAAATGTTTTAAATGAAGTAAACCTTCAGCAAAATAGA
TTTGGAAAAATATGGAGTTATTCGATTCTGACTGAATTGGCTTTAAATGATATTATATATTATGAATATCAGGAACTATT
GCCGGAACATTTAAATGAGATCGAATATTATTTTAAAAGTATTATTCTTTCTTATATACAAGTAGTTTATATTACGCTGA
ATCAGCCTAAAACCTATTTCTTAAACAATCGCAGTTTATACTTTTTAGTAAAACTTAAAGACAGCAAAGGCAATTATAAT
TTTGTTTATTTAAATATTCCTTCTGATAAACTAGATCGTTTTAAACAGCTGCAAAGCATAGAAAACATACATTATATTAT
TTCAATTGATACTATAATTCGAAAATGTTTATCACTTATTTTTCCATCAGATAAAATCATTTCGTGTAATGCCATAAAAT
TAAACCGAGATGAAAATTATTTGATAGAAGACGAAAACACAGGCGATTTAATAGCCAAAATTGAAGCAAAGGTTGAAGAG
CGAAAACGAGGTTCTGCTACACGATTTCTGTATGATTCTAATATGGATGCTGATTCTTTTTCGATCTGTAAAAAAGCATT
CAAACTTTACAAAAGTGAAATGATAAAGGGAGGAAGCCATCATAATTTTTTCGATTTATTCAGATTTCCAAATCCGGTTA
CCCCAAAGTTACAGGGAGCGTATTATCCAAATCTTCCGCATCTGCCTTTTGAAAACAATAAATCAATTTTTGATGTCATA
AATAAAAAAAATCAATTACTTCATTTTCCTTATCAATCCTATTATTATGTGCTTCAGTTTTTTAATCAAGCAGGAATTAA
TAAAAATGTTACCGAGATTAAAATTACGCTGTATCGCATTTCTTCTCAATCCTTAATCGCAAATGCTTTAATAAGCGCTG
CAAAAAATGGAAAAAAAGTAACCGTTTTTGTTGAAGTAAAAGCGCGTTTTGACGAACATAATAATTTGTACTGGTCTAAA
GAAATGAAGAAAGCAGGCATAAAAATTATTCAAAGTCTGCCGAATTTAAAAGTACACGCCAAAGCGGCCATGATTACCAT
GAAAGATAAATACGGTAATAAAAAGAATTATGGATATCTGTCAACTGGAAATTTTAATGAAAGTACGGCAAATATATATT
CAGATTTTGGTTTTTTTACAGCAGAAACGGCCTATACAAATGATTTAAAGAAGATTTTTTCATTTTTAAAAACCAAGAAA
AAAACAACTGAACCAAAACATATTTTAGCCGCTGGTTTTAATATGAAAGAAAAAATACTGGAATTAATAGATACCGAAAT
AAAAAATAAAAAAGCAGGCAAATCGGCTTCGGTATTTTTAAAAGTAAACGGACTGGATGAAAAAGATATTATTGATAAAC
TTATTGAAGCAAGCAGGGCAGATGTTGAAGTTACATTAATAGTTCGTGGAATATGCACGCTTTTACCGGGAATTAAAAAA
ATTTCACAAAATATAAAAATCTATCGTATTGTCGATATGTTTTTAGAGCATTCCAGAATTTACAAATTTGCCAATAACGG
ACAGGAAAAAATCTATTTATCTTCTGCCGACATGTTAAGCCGAAATTTAAACAGAAGAATCGAAGTGGCTTTCCCTTTGT
ATGATGAAAGGCATATTGAAGAAATCAATAAAATAATTCAGCTGCAGTTAGAAGATAATACAAAAAGAAGAATTGTAAAC
ATTCAGGGCAGTAATGAATTAGAAAATAAGGATAATGAAAATCCACGTCGGGCTCAAACAGAAACTTACAACTGGATAGC
AGATGCAAATAGAATATCCTGA

Upstream 100 bases:

>100_bases
TGGTTAATTGCTTGGTTTTATGATAAATTGAACGAAAAATAATGACTTAAATTTACGAAGTTAGTATTGTTAATTCAGTT
TTAATCTCAAAATGTAGCAA

Downstream 100 bases:

>100_bases
ATTAGTTTAAAAAAAATCTGAGCTGTTTGCTCAGATTTTTTTTAGATATTTATCGCATTTTAATGTCGTTGGTTTCTTAT
CCTGTTACTTTTAAATTCTG

Product: polyphosphate kinase

Products: NA

Alternate protein names: ATP-polyphosphate phosphotransferase; Polyphosphoric acid kinase [H]

Number of amino acids: Translated: 673; Mature: 673

Protein sequence:

>673_residues
MQNYLIPSEISWLSFNNCILDEAEDLNNAVYDRIKFLAIHSSNLDEFFRVKINKLLKKKTKKSSDLLENVLNEVNLQQNR
FGKIWSYSILTELALNDIIYYEYQELLPEHLNEIEYYFKSIILSYIQVVYITLNQPKTYFLNNRSLYFLVKLKDSKGNYN
FVYLNIPSDKLDRFKQLQSIENIHYIISIDTIIRKCLSLIFPSDKIISCNAIKLNRDENYLIEDENTGDLIAKIEAKVEE
RKRGSATRFLYDSNMDADSFSICKKAFKLYKSEMIKGGSHHNFFDLFRFPNPVTPKLQGAYYPNLPHLPFENNKSIFDVI
NKKNQLLHFPYQSYYYVLQFFNQAGINKNVTEIKITLYRISSQSLIANALISAAKNGKKVTVFVEVKARFDEHNNLYWSK
EMKKAGIKIIQSLPNLKVHAKAAMITMKDKYGNKKNYGYLSTGNFNESTANIYSDFGFFTAETAYTNDLKKIFSFLKTKK
KTTEPKHILAAGFNMKEKILELIDTEIKNKKAGKSASVFLKVNGLDEKDIIDKLIEASRADVEVTLIVRGICTLLPGIKK
ISQNIKIYRIVDMFLEHSRIYKFANNGQEKIYLSSADMLSRNLNRRIEVAFPLYDERHIEEINKIIQLQLEDNTKRRIVN
IQGSNELENKDNENPRRAQTETYNWIADANRIS

Sequences:

>Translated_673_residues
MQNYLIPSEISWLSFNNCILDEAEDLNNAVYDRIKFLAIHSSNLDEFFRVKINKLLKKKTKKSSDLLENVLNEVNLQQNR
FGKIWSYSILTELALNDIIYYEYQELLPEHLNEIEYYFKSIILSYIQVVYITLNQPKTYFLNNRSLYFLVKLKDSKGNYN
FVYLNIPSDKLDRFKQLQSIENIHYIISIDTIIRKCLSLIFPSDKIISCNAIKLNRDENYLIEDENTGDLIAKIEAKVEE
RKRGSATRFLYDSNMDADSFSICKKAFKLYKSEMIKGGSHHNFFDLFRFPNPVTPKLQGAYYPNLPHLPFENNKSIFDVI
NKKNQLLHFPYQSYYYVLQFFNQAGINKNVTEIKITLYRISSQSLIANALISAAKNGKKVTVFVEVKARFDEHNNLYWSK
EMKKAGIKIIQSLPNLKVHAKAAMITMKDKYGNKKNYGYLSTGNFNESTANIYSDFGFFTAETAYTNDLKKIFSFLKTKK
KTTEPKHILAAGFNMKEKILELIDTEIKNKKAGKSASVFLKVNGLDEKDIIDKLIEASRADVEVTLIVRGICTLLPGIKK
ISQNIKIYRIVDMFLEHSRIYKFANNGQEKIYLSSADMLSRNLNRRIEVAFPLYDERHIEEINKIIQLQLEDNTKRRIVN
IQGSNELENKDNENPRRAQTETYNWIADANRIS
>Mature_673_residues
MQNYLIPSEISWLSFNNCILDEAEDLNNAVYDRIKFLAIHSSNLDEFFRVKINKLLKKKTKKSSDLLENVLNEVNLQQNR
FGKIWSYSILTELALNDIIYYEYQELLPEHLNEIEYYFKSIILSYIQVVYITLNQPKTYFLNNRSLYFLVKLKDSKGNYN
FVYLNIPSDKLDRFKQLQSIENIHYIISIDTIIRKCLSLIFPSDKIISCNAIKLNRDENYLIEDENTGDLIAKIEAKVEE
RKRGSATRFLYDSNMDADSFSICKKAFKLYKSEMIKGGSHHNFFDLFRFPNPVTPKLQGAYYPNLPHLPFENNKSIFDVI
NKKNQLLHFPYQSYYYVLQFFNQAGINKNVTEIKITLYRISSQSLIANALISAAKNGKKVTVFVEVKARFDEHNNLYWSK
EMKKAGIKIIQSLPNLKVHAKAAMITMKDKYGNKKNYGYLSTGNFNESTANIYSDFGFFTAETAYTNDLKKIFSFLKTKK
KTTEPKHILAAGFNMKEKILELIDTEIKNKKAGKSASVFLKVNGLDEKDIIDKLIEASRADVEVTLIVRGICTLLPGIKK
ISQNIKIYRIVDMFLEHSRIYKFANNGQEKIYLSSADMLSRNLNRRIEVAFPLYDERHIEEINKIIQLQLEDNTKRRIVN
IQGSNELENKDNENPRRAQTETYNWIADANRIS

Specific function: Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) [H]

COG id: COG0855

COG function: function code P; Polyphosphate kinase

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PLD phosphodiesterase domain [H]

Homologues:

Organism=Escherichia coli, GI1788847, Length=678, Percent_Identity=33.7758112094395, Blast_Score=405, Evalue=1e-114,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001736
- InterPro:   IPR003414 [H]

Pfam domain/function: PF02503 PP_kinase [H]

EC number: =2.7.4.1 [H]

Molecular weight: Translated: 78365; Mature: 78365

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNYLIPSEISWLSFNNCILDEAEDLNNAVYDRIKFLAIHSSNLDEFFRVKINKLLKKKT
CCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHH
KKSSDLLENVLNEVNLQQNRFGKIWSYSILTELALNDIIYYEYQELLPEHLNEIEYYFKS
CCHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IILSYIQVVYITLNQPKTYFLNNRSLYFLVKLKDSKGNYNFVYLNIPSDKLDRFKQLQSI
HHHHHHHEEEEEECCCCEEEECCCEEEEEEEEECCCCCEEEEEEECCHHHHHHHHHHHHH
ENIHYIISIDTIIRKCLSLIFPSDKIISCNAIKLNRDENYLIEDENTGDLIAKIEAKVEE
CCEEEEEEHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEECCCCCCEEHHHHHHHHH
RKRGSATRFLYDSNMDADSFSICKKAFKLYKSEMIKGGSHHNFFDLFRFPNPVTPKLQGA
HHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCC
YYPNLPHLPFENNKSIFDVINKKNQLLHFPYQSYYYVLQFFNQAGINKNVTEIKITLYRI
CCCCCCCCCCCCCCHHHHHHCCCCCEEECCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEE
SSQSLIANALISAAKNGKKVTVFVEVKARFDEHNNLYWSKEMKKAGIKIIQSLPNLKVHA
CCHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCEEEHHHHHHHHHHHHHHCCCCEEEE
KAAMITMKDKYGNKKNYGYLSTGNFNESTANIYSDFGFFTAETAYTNDLKKIFSFLKTKK
EEEEEEEEHHCCCCCCCEEEECCCCCCCHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHC
KTTEPKHILAAGFNMKEKILELIDTEIKNKKAGKSASVFLKVNGLDEKDIIDKLIEASRA
CCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCC
DVEVTLIVRGICTLLPGIKKISQNIKIYRIVDMFLEHSRIYKFANNGQEKIYLSSADMLS
CEEEEHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCCCEEEEECHHHHH
RNLNRRIEVAFPLYDERHIEEINKIIQLQLEDNTKRRIVNIQGSNELENKDNENPRRAQT
HCCCCEEEEEECCCCHHHHHHHHHEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCC
ETYNWIADANRIS
CHHHEECCCCCCC
>Mature Secondary Structure
MQNYLIPSEISWLSFNNCILDEAEDLNNAVYDRIKFLAIHSSNLDEFFRVKINKLLKKKT
CCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHH
KKSSDLLENVLNEVNLQQNRFGKIWSYSILTELALNDIIYYEYQELLPEHLNEIEYYFKS
CCHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IILSYIQVVYITLNQPKTYFLNNRSLYFLVKLKDSKGNYNFVYLNIPSDKLDRFKQLQSI
HHHHHHHEEEEEECCCCEEEECCCEEEEEEEEECCCCCEEEEEEECCHHHHHHHHHHHHH
ENIHYIISIDTIIRKCLSLIFPSDKIISCNAIKLNRDENYLIEDENTGDLIAKIEAKVEE
CCEEEEEEHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEECCCCCCEEHHHHHHHHH
RKRGSATRFLYDSNMDADSFSICKKAFKLYKSEMIKGGSHHNFFDLFRFPNPVTPKLQGA
HHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCC
YYPNLPHLPFENNKSIFDVINKKNQLLHFPYQSYYYVLQFFNQAGINKNVTEIKITLYRI
CCCCCCCCCCCCCCHHHHHHCCCCCEEECCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEE
SSQSLIANALISAAKNGKKVTVFVEVKARFDEHNNLYWSKEMKKAGIKIIQSLPNLKVHA
CCHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCEEEHHHHHHHHHHHHHHCCCCEEEE
KAAMITMKDKYGNKKNYGYLSTGNFNESTANIYSDFGFFTAETAYTNDLKKIFSFLKTKK
EEEEEEEEHHCCCCCCCEEEECCCCCCCHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHC
KTTEPKHILAAGFNMKEKILELIDTEIKNKKAGKSASVFLKVNGLDEKDIIDKLIEASRA
CCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCC
DVEVTLIVRGICTLLPGIKKISQNIKIYRIVDMFLEHSRIYKFANNGQEKIYLSSADMLS
CEEEEHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCCCEEEEECHHHHH
RNLNRRIEVAFPLYDERHIEEINKIIQLQLEDNTKRRIVNIQGSNELENKDNENPRRAQT
HCCCCEEEEEECCCCHHHHHHHHHEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCC
ETYNWIADANRIS
CHHHEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]