Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
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Accession | NC_009441 |
Length | 6,096,872 |
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The map label for this gene is ppk [H]
Identifier: 146301590
GI number: 146301590
Start: 4563165
End: 4565186
Strand: Reverse
Name: ppk [H]
Synonym: Fjoh_3851
Alternate gene names: 146301590
Gene position: 4565186-4563165 (Counterclockwise)
Preceding gene: 146301591
Following gene: 146301587
Centisome position: 74.88
GC content: 29.77
Gene sequence:
>2022_bases GTGCAAAACTATCTTATTCCTTCAGAAATATCTTGGCTTTCTTTCAATAATTGTATTTTGGATGAAGCAGAAGACTTAAA TAATGCAGTATATGACAGAATTAAATTTTTGGCTATACATTCCTCTAATCTGGATGAGTTTTTCAGGGTTAAAATAAATA AACTCCTAAAAAAGAAAACTAAGAAAAGCAGTGACCTTCTGGAAAATGTTTTAAATGAAGTAAACCTTCAGCAAAATAGA TTTGGAAAAATATGGAGTTATTCGATTCTGACTGAATTGGCTTTAAATGATATTATATATTATGAATATCAGGAACTATT GCCGGAACATTTAAATGAGATCGAATATTATTTTAAAAGTATTATTCTTTCTTATATACAAGTAGTTTATATTACGCTGA ATCAGCCTAAAACCTATTTCTTAAACAATCGCAGTTTATACTTTTTAGTAAAACTTAAAGACAGCAAAGGCAATTATAAT TTTGTTTATTTAAATATTCCTTCTGATAAACTAGATCGTTTTAAACAGCTGCAAAGCATAGAAAACATACATTATATTAT TTCAATTGATACTATAATTCGAAAATGTTTATCACTTATTTTTCCATCAGATAAAATCATTTCGTGTAATGCCATAAAAT TAAACCGAGATGAAAATTATTTGATAGAAGACGAAAACACAGGCGATTTAATAGCCAAAATTGAAGCAAAGGTTGAAGAG CGAAAACGAGGTTCTGCTACACGATTTCTGTATGATTCTAATATGGATGCTGATTCTTTTTCGATCTGTAAAAAAGCATT CAAACTTTACAAAAGTGAAATGATAAAGGGAGGAAGCCATCATAATTTTTTCGATTTATTCAGATTTCCAAATCCGGTTA CCCCAAAGTTACAGGGAGCGTATTATCCAAATCTTCCGCATCTGCCTTTTGAAAACAATAAATCAATTTTTGATGTCATA AATAAAAAAAATCAATTACTTCATTTTCCTTATCAATCCTATTATTATGTGCTTCAGTTTTTTAATCAAGCAGGAATTAA TAAAAATGTTACCGAGATTAAAATTACGCTGTATCGCATTTCTTCTCAATCCTTAATCGCAAATGCTTTAATAAGCGCTG CAAAAAATGGAAAAAAAGTAACCGTTTTTGTTGAAGTAAAAGCGCGTTTTGACGAACATAATAATTTGTACTGGTCTAAA GAAATGAAGAAAGCAGGCATAAAAATTATTCAAAGTCTGCCGAATTTAAAAGTACACGCCAAAGCGGCCATGATTACCAT GAAAGATAAATACGGTAATAAAAAGAATTATGGATATCTGTCAACTGGAAATTTTAATGAAAGTACGGCAAATATATATT CAGATTTTGGTTTTTTTACAGCAGAAACGGCCTATACAAATGATTTAAAGAAGATTTTTTCATTTTTAAAAACCAAGAAA AAAACAACTGAACCAAAACATATTTTAGCCGCTGGTTTTAATATGAAAGAAAAAATACTGGAATTAATAGATACCGAAAT AAAAAATAAAAAAGCAGGCAAATCGGCTTCGGTATTTTTAAAAGTAAACGGACTGGATGAAAAAGATATTATTGATAAAC TTATTGAAGCAAGCAGGGCAGATGTTGAAGTTACATTAATAGTTCGTGGAATATGCACGCTTTTACCGGGAATTAAAAAA ATTTCACAAAATATAAAAATCTATCGTATTGTCGATATGTTTTTAGAGCATTCCAGAATTTACAAATTTGCCAATAACGG ACAGGAAAAAATCTATTTATCTTCTGCCGACATGTTAAGCCGAAATTTAAACAGAAGAATCGAAGTGGCTTTCCCTTTGT ATGATGAAAGGCATATTGAAGAAATCAATAAAATAATTCAGCTGCAGTTAGAAGATAATACAAAAAGAAGAATTGTAAAC ATTCAGGGCAGTAATGAATTAGAAAATAAGGATAATGAAAATCCACGTCGGGCTCAAACAGAAACTTACAACTGGATAGC AGATGCAAATAGAATATCCTGA
Upstream 100 bases:
>100_bases TGGTTAATTGCTTGGTTTTATGATAAATTGAACGAAAAATAATGACTTAAATTTACGAAGTTAGTATTGTTAATTCAGTT TTAATCTCAAAATGTAGCAA
Downstream 100 bases:
>100_bases ATTAGTTTAAAAAAAATCTGAGCTGTTTGCTCAGATTTTTTTTAGATATTTATCGCATTTTAATGTCGTTGGTTTCTTAT CCTGTTACTTTTAAATTCTG
Product: polyphosphate kinase
Products: NA
Alternate protein names: ATP-polyphosphate phosphotransferase; Polyphosphoric acid kinase [H]
Number of amino acids: Translated: 673; Mature: 673
Protein sequence:
>673_residues MQNYLIPSEISWLSFNNCILDEAEDLNNAVYDRIKFLAIHSSNLDEFFRVKINKLLKKKTKKSSDLLENVLNEVNLQQNR FGKIWSYSILTELALNDIIYYEYQELLPEHLNEIEYYFKSIILSYIQVVYITLNQPKTYFLNNRSLYFLVKLKDSKGNYN FVYLNIPSDKLDRFKQLQSIENIHYIISIDTIIRKCLSLIFPSDKIISCNAIKLNRDENYLIEDENTGDLIAKIEAKVEE RKRGSATRFLYDSNMDADSFSICKKAFKLYKSEMIKGGSHHNFFDLFRFPNPVTPKLQGAYYPNLPHLPFENNKSIFDVI NKKNQLLHFPYQSYYYVLQFFNQAGINKNVTEIKITLYRISSQSLIANALISAAKNGKKVTVFVEVKARFDEHNNLYWSK EMKKAGIKIIQSLPNLKVHAKAAMITMKDKYGNKKNYGYLSTGNFNESTANIYSDFGFFTAETAYTNDLKKIFSFLKTKK KTTEPKHILAAGFNMKEKILELIDTEIKNKKAGKSASVFLKVNGLDEKDIIDKLIEASRADVEVTLIVRGICTLLPGIKK ISQNIKIYRIVDMFLEHSRIYKFANNGQEKIYLSSADMLSRNLNRRIEVAFPLYDERHIEEINKIIQLQLEDNTKRRIVN IQGSNELENKDNENPRRAQTETYNWIADANRIS
Sequences:
>Translated_673_residues MQNYLIPSEISWLSFNNCILDEAEDLNNAVYDRIKFLAIHSSNLDEFFRVKINKLLKKKTKKSSDLLENVLNEVNLQQNR FGKIWSYSILTELALNDIIYYEYQELLPEHLNEIEYYFKSIILSYIQVVYITLNQPKTYFLNNRSLYFLVKLKDSKGNYN FVYLNIPSDKLDRFKQLQSIENIHYIISIDTIIRKCLSLIFPSDKIISCNAIKLNRDENYLIEDENTGDLIAKIEAKVEE RKRGSATRFLYDSNMDADSFSICKKAFKLYKSEMIKGGSHHNFFDLFRFPNPVTPKLQGAYYPNLPHLPFENNKSIFDVI NKKNQLLHFPYQSYYYVLQFFNQAGINKNVTEIKITLYRISSQSLIANALISAAKNGKKVTVFVEVKARFDEHNNLYWSK EMKKAGIKIIQSLPNLKVHAKAAMITMKDKYGNKKNYGYLSTGNFNESTANIYSDFGFFTAETAYTNDLKKIFSFLKTKK KTTEPKHILAAGFNMKEKILELIDTEIKNKKAGKSASVFLKVNGLDEKDIIDKLIEASRADVEVTLIVRGICTLLPGIKK ISQNIKIYRIVDMFLEHSRIYKFANNGQEKIYLSSADMLSRNLNRRIEVAFPLYDERHIEEINKIIQLQLEDNTKRRIVN IQGSNELENKDNENPRRAQTETYNWIADANRIS >Mature_673_residues MQNYLIPSEISWLSFNNCILDEAEDLNNAVYDRIKFLAIHSSNLDEFFRVKINKLLKKKTKKSSDLLENVLNEVNLQQNR FGKIWSYSILTELALNDIIYYEYQELLPEHLNEIEYYFKSIILSYIQVVYITLNQPKTYFLNNRSLYFLVKLKDSKGNYN FVYLNIPSDKLDRFKQLQSIENIHYIISIDTIIRKCLSLIFPSDKIISCNAIKLNRDENYLIEDENTGDLIAKIEAKVEE RKRGSATRFLYDSNMDADSFSICKKAFKLYKSEMIKGGSHHNFFDLFRFPNPVTPKLQGAYYPNLPHLPFENNKSIFDVI NKKNQLLHFPYQSYYYVLQFFNQAGINKNVTEIKITLYRISSQSLIANALISAAKNGKKVTVFVEVKARFDEHNNLYWSK EMKKAGIKIIQSLPNLKVHAKAAMITMKDKYGNKKNYGYLSTGNFNESTANIYSDFGFFTAETAYTNDLKKIFSFLKTKK KTTEPKHILAAGFNMKEKILELIDTEIKNKKAGKSASVFLKVNGLDEKDIIDKLIEASRADVEVTLIVRGICTLLPGIKK ISQNIKIYRIVDMFLEHSRIYKFANNGQEKIYLSSADMLSRNLNRRIEVAFPLYDERHIEEINKIIQLQLEDNTKRRIVN IQGSNELENKDNENPRRAQTETYNWIADANRIS
Specific function: Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) [H]
COG id: COG0855
COG function: function code P; Polyphosphate kinase
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PLD phosphodiesterase domain [H]
Homologues:
Organism=Escherichia coli, GI1788847, Length=678, Percent_Identity=33.7758112094395, Blast_Score=405, Evalue=1e-114,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001736 - InterPro: IPR003414 [H]
Pfam domain/function: PF02503 PP_kinase [H]
EC number: =2.7.4.1 [H]
Molecular weight: Translated: 78365; Mature: 78365
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNYLIPSEISWLSFNNCILDEAEDLNNAVYDRIKFLAIHSSNLDEFFRVKINKLLKKKT CCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHH KKSSDLLENVLNEVNLQQNRFGKIWSYSILTELALNDIIYYEYQELLPEHLNEIEYYFKS CCHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IILSYIQVVYITLNQPKTYFLNNRSLYFLVKLKDSKGNYNFVYLNIPSDKLDRFKQLQSI HHHHHHHEEEEEECCCCEEEECCCEEEEEEEEECCCCCEEEEEEECCHHHHHHHHHHHHH ENIHYIISIDTIIRKCLSLIFPSDKIISCNAIKLNRDENYLIEDENTGDLIAKIEAKVEE CCEEEEEEHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEECCCCCCEEHHHHHHHHH RKRGSATRFLYDSNMDADSFSICKKAFKLYKSEMIKGGSHHNFFDLFRFPNPVTPKLQGA HHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCC YYPNLPHLPFENNKSIFDVINKKNQLLHFPYQSYYYVLQFFNQAGINKNVTEIKITLYRI CCCCCCCCCCCCCCHHHHHHCCCCCEEECCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEE SSQSLIANALISAAKNGKKVTVFVEVKARFDEHNNLYWSKEMKKAGIKIIQSLPNLKVHA CCHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCEEEHHHHHHHHHHHHHHCCCCEEEE KAAMITMKDKYGNKKNYGYLSTGNFNESTANIYSDFGFFTAETAYTNDLKKIFSFLKTKK EEEEEEEEHHCCCCCCCEEEECCCCCCCHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHC KTTEPKHILAAGFNMKEKILELIDTEIKNKKAGKSASVFLKVNGLDEKDIIDKLIEASRA CCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCC DVEVTLIVRGICTLLPGIKKISQNIKIYRIVDMFLEHSRIYKFANNGQEKIYLSSADMLS CEEEEHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCCCEEEEECHHHHH RNLNRRIEVAFPLYDERHIEEINKIIQLQLEDNTKRRIVNIQGSNELENKDNENPRRAQT HCCCCEEEEEECCCCHHHHHHHHHEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCC ETYNWIADANRIS CHHHEECCCCCCC >Mature Secondary Structure MQNYLIPSEISWLSFNNCILDEAEDLNNAVYDRIKFLAIHSSNLDEFFRVKINKLLKKKT CCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHH KKSSDLLENVLNEVNLQQNRFGKIWSYSILTELALNDIIYYEYQELLPEHLNEIEYYFKS CCHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IILSYIQVVYITLNQPKTYFLNNRSLYFLVKLKDSKGNYNFVYLNIPSDKLDRFKQLQSI HHHHHHHEEEEEECCCCEEEECCCEEEEEEEEECCCCCEEEEEEECCHHHHHHHHHHHHH ENIHYIISIDTIIRKCLSLIFPSDKIISCNAIKLNRDENYLIEDENTGDLIAKIEAKVEE CCEEEEEEHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEECCCCCCEEHHHHHHHHH RKRGSATRFLYDSNMDADSFSICKKAFKLYKSEMIKGGSHHNFFDLFRFPNPVTPKLQGA HHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCC YYPNLPHLPFENNKSIFDVINKKNQLLHFPYQSYYYVLQFFNQAGINKNVTEIKITLYRI CCCCCCCCCCCCCCHHHHHHCCCCCEEECCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEE SSQSLIANALISAAKNGKKVTVFVEVKARFDEHNNLYWSKEMKKAGIKIIQSLPNLKVHA CCHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCEEEHHHHHHHHHHHHHHCCCCEEEE KAAMITMKDKYGNKKNYGYLSTGNFNESTANIYSDFGFFTAETAYTNDLKKIFSFLKTKK EEEEEEEEHHCCCCCCCEEEECCCCCCCHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHC KTTEPKHILAAGFNMKEKILELIDTEIKNKKAGKSASVFLKVNGLDEKDIIDKLIEASRA CCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCC DVEVTLIVRGICTLLPGIKKISQNIKIYRIVDMFLEHSRIYKFANNGQEKIYLSSADMLS CEEEEHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCCCEEEEECHHHHH RNLNRRIEVAFPLYDERHIEEINKIIQLQLEDNTKRRIVNIQGSNELENKDNENPRRAQT HCCCCEEEEEECCCCHHHHHHHHHEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCC ETYNWIADANRIS CHHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]