Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is yfeH [C]

Identifier: 146301577

GI number: 146301577

Start: 4547775

End: 4548713

Strand: Direct

Name: yfeH [C]

Synonym: Fjoh_3838

Alternate gene names: 146301577

Gene position: 4547775-4548713 (Clockwise)

Preceding gene: 146301575

Following gene: 146301580

Centisome position: 74.59

GC content: 42.81

Gene sequence:

>939_bases
ATGATAGGCACCATGATCCTGCTGGCTTATTTTTTGCCGAAGCCGGGCATAATCAAAGAACCTGTTTCGCTGGAAGAGAT
TGCCAATGCAGGTGTATCGTTGATTTTCTTTTTTTATGGCCTGCGCCTGAGTGTTGAGAAATTAAAAGCCGGACTTGCCA
ACTTGAAAATGCACATTGTCGTTCAGTTCACAACCTTTTTGTTTTTTCCGCTTATCGTTTTGGCATTTCGCCCTTTGTTT
ATCAACGCAGGTTTTGAGCTGCTTTGGCTGGGTGTATTCTTTCTGGCAGCTTTACCATCCACAGTTTCCTCTTCAGTGGT
CATGGTTTCTATTGCTAAGGGCAACATTCCCGCAGCTATTTTCAATGCGAGTATTTCCAGTTTGATCGGAGTAATCGTTA
CACCGCTCTGGGTTGGATTGTTCATAGCTTCTGCAACAGGCGATTTTGATGTCACTGATATCGTAATAAAGTTGGTTTTT
CAAGTCTTATTGCCTGTCATCATTGGCATCAGCCTCAACTCTCGTTTTGGAGCCATTGCTGAAAAATACAAGAAACAGCT
CAAATATTTCGACCAGGCTATCATCCTTACCATCATTTACACATCGTTTTGTAAGTCATTCACACAACATCTTTTCGAAG
GTTTCACAGCCCTTGAGCTTGCGGGACTCGCTGCAGGAATGATGGTCTTGTTTTTTGCCGTATTCCTTTGTGTCGGGCTT
CTCAGCCGCTTACTTGGTTTTTCGGATGAAGATCGTATTACGGTTTTATTTTGCGGATCTAAAAAGTCGTTGGTACACGG
CACCGTCATGTCAAAAGTGCTTTTTCAGCACAGTACTATCACCGGTATCGTATTGTTGCCGCTTATGATTTATCATGCCT
TGCAATTGATTGCTGCAAGTATCATCGCTCAGGGTATGGCTCGACGAAAAAAAGTATAA

Upstream 100 bases:

>100_bases
CAAAATATACTTTTGCAGTATAAAAATCTATTAAAATAAGAGCACATTGAAAAAGTTATTAGAAGTATTAAGTAAAGCAG
GTTTCGACGGTTTCCTGTTA

Downstream 100 bases:

>100_bases
TTTTAAGAGCCAGTTGTTAGTCCGTAGAGTATCTTAACTCTACGGACAGAGGGAGTTAAAAAAAAAGCTCCATTTTATAA
TTAATACATTGAATTAAACA

Product: Na+-dependent transporter-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MIGTMILLAYFLPKPGIIKEPVSLEEIANAGVSLIFFFYGLRLSVEKLKAGLANLKMHIVVQFTTFLFFPLIVLAFRPLF
INAGFELLWLGVFFLAALPSTVSSSVVMVSIAKGNIPAAIFNASISSLIGVIVTPLWVGLFIASATGDFDVTDIVIKLVF
QVLLPVIIGISLNSRFGAIAEKYKKQLKYFDQAIILTIIYTSFCKSFTQHLFEGFTALELAGLAAGMMVLFFAVFLCVGL
LSRLLGFSDEDRITVLFCGSKKSLVHGTVMSKVLFQHSTITGIVLLPLMIYHALQLIAASIIAQGMARRKKV

Sequences:

>Translated_312_residues
MIGTMILLAYFLPKPGIIKEPVSLEEIANAGVSLIFFFYGLRLSVEKLKAGLANLKMHIVVQFTTFLFFPLIVLAFRPLF
INAGFELLWLGVFFLAALPSTVSSSVVMVSIAKGNIPAAIFNASISSLIGVIVTPLWVGLFIASATGDFDVTDIVIKLVF
QVLLPVIIGISLNSRFGAIAEKYKKQLKYFDQAIILTIIYTSFCKSFTQHLFEGFTALELAGLAAGMMVLFFAVFLCVGL
LSRLLGFSDEDRITVLFCGSKKSLVHGTVMSKVLFQHSTITGIVLLPLMIYHALQLIAASIIAQGMARRKKV
>Mature_312_residues
MIGTMILLAYFLPKPGIIKEPVSLEEIANAGVSLIFFFYGLRLSVEKLKAGLANLKMHIVVQFTTFLFFPLIVLAFRPLF
INAGFELLWLGVFFLAALPSTVSSSVVMVSIAKGNIPAAIFNASISSLIGVIVTPLWVGLFIASATGDFDVTDIVIKLVF
QVLLPVIIGISLNSRFGAIAEKYKKQLKYFDQAIILTIIYTSFCKSFTQHLFEGFTALELAGLAAGMMVLFFAVFLCVGL
LSRLLGFSDEDRITVLFCGSKKSLVHGTVMSKVLFQHSTITGIVLLPLMIYHALQLIAASIIAQGMARRKKV

Specific function: Unknown

COG id: COG0385

COG function: function code R; Predicted Na+-dependent transporter

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yfeH [H]

Homologues:

Organism=Homo sapiens, GI71725371, Length=309, Percent_Identity=30.42071197411, Blast_Score=117, Evalue=1e-26,
Organism=Escherichia coli, GI1788749, Length=311, Percent_Identity=33.4405144694534, Blast_Score=150, Evalue=9e-38,
Organism=Saccharomyces cerevisiae, GI6323677, Length=349, Percent_Identity=24.6418338108883, Blast_Score=63, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002657
- InterPro:   IPR016833 [H]

Pfam domain/function: PF01758 SBF [H]

EC number: NA

Molecular weight: Translated: 34100; Mature: 34100

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGTMILLAYFLPKPGIIKEPVSLEEIANAGVSLIFFFYGLRLSVEKLKAGLANLKMHIV
CHHHHHHHHHHCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQFTTFLFFPLIVLAFRPLFINAGFELLWLGVFFLAALPSTVSSSVVMVSIAKGNIPAAI
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHH
FNASISSLIGVIVTPLWVGLFIASATGDFDVTDIVIKLVFQVLLPVIIGISLNSRFGAIA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
EKYKKQLKYFDQAIILTIIYTSFCKSFTQHLFEGFTALELAGLAAGMMVLFFAVFLCVGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSRLLGFSDEDRITVLFCGSKKSLVHGTVMSKVLFQHSTITGIVLLPLMIYHALQLIAAS
HHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIAQGMARRKKV
HHHHHHHHHCCC
>Mature Secondary Structure
MIGTMILLAYFLPKPGIIKEPVSLEEIANAGVSLIFFFYGLRLSVEKLKAGLANLKMHIV
CHHHHHHHHHHCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQFTTFLFFPLIVLAFRPLFINAGFELLWLGVFFLAALPSTVSSSVVMVSIAKGNIPAAI
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHH
FNASISSLIGVIVTPLWVGLFIASATGDFDVTDIVIKLVFQVLLPVIIGISLNSRFGAIA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
EKYKKQLKYFDQAIILTIIYTSFCKSFTQHLFEGFTALELAGLAAGMMVLFFAVFLCVGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSRLLGFSDEDRITVLFCGSKKSLVHGTVMSKVLFQHSTITGIVLLPLMIYHALQLIAAS
HHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIAQGMARRKKV
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043; 1849605 [H]