Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146301538

Identifier: 146301538

GI number: 146301538

Start: 4502483

End: 4503004

Strand: Reverse

Name: 146301538

Synonym: Fjoh_3799

Alternate gene names: NA

Gene position: 4503004-4502483 (Counterclockwise)

Preceding gene: 146301539

Following gene: 146301532

Centisome position: 73.86

GC content: 34.48

Gene sequence:

>522_bases
ATGAAAAAAGTATTAGTGATCGTATTCATCTTCTTAAGCGGTCTGACTCAGGCCCAACTAACATCAAAAGAAGAAGTAGC
GCCAGAATTGGTTCAAAAAAGAGAAGAGCAGAAAAAGGAAATTACTAAAAATTATCTGGCTTTAAAAAACAGTTTAATTA
CTTCAGATAGTTTAGCGGTGGTAAAAAACGCAGAAGCTTTAAGGAATTCTTTAAAGAACTTCAAATTTAAAAAGCTGAGT
TTAGAACAAATGAATGCAGCGACAACAACAAGAAAAGCAATTTCAGATTTAGCAGCTGAAATGGCATCAACTAAAAATAT
TAATAAACAGCGCAAAATTTTTGAAACACTTTCTGTGAAATACTGGGAAGCGGCTTCAAAATTCAAAGCAGCTGATGCAG
CATTATACCTGCAGGTCTGCCCAATGACAGGTGCTGTATGGACAAGTGATAGTAAAGAAATTAAAAATCCTTATTATCCC
AAAAATATGCTGACTTGCGGTGAAGTAAAAGCAAGTTTGTAG

Upstream 100 bases:

>100_bases
AGTTAATGAACGGAACATCAGGTTTAAGTAAAGATCATTACGAAGCAATCTTGATCGAAATGGACAAAATAGTTACAAAA
TTAAACTCAATTACAACGAT

Downstream 100 bases:

>100_bases
TTTTTTTAATTTGAATTAGTTTGATAAATACGGTATTCTGAAAGGAGCCGTATTTTGTCGTTTATCATATTTTTTATGTA
TGAGAAAAAAATATAGTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MKKVLVIVFIFLSGLTQAQLTSKEEVAPELVQKREEQKKEITKNYLALKNSLITSDSLAVVKNAEALRNSLKNFKFKKLS
LEQMNAATTTRKAISDLAAEMASTKNINKQRKIFETLSVKYWEAASKFKAADAALYLQVCPMTGAVWTSDSKEIKNPYYP
KNMLTCGEVKASL

Sequences:

>Translated_173_residues
MKKVLVIVFIFLSGLTQAQLTSKEEVAPELVQKREEQKKEITKNYLALKNSLITSDSLAVVKNAEALRNSLKNFKFKKLS
LEQMNAATTTRKAISDLAAEMASTKNINKQRKIFETLSVKYWEAASKFKAADAALYLQVCPMTGAVWTSDSKEIKNPYYP
KNMLTCGEVKASL
>Mature_173_residues
MKKVLVIVFIFLSGLTQAQLTSKEEVAPELVQKREEQKKEITKNYLALKNSLITSDSLAVVKNAEALRNSLKNFKFKKLS
LEQMNAATTTRKAISDLAAEMASTKNINKQRKIFETLSVKYWEAASKFKAADAALYLQVCPMTGAVWTSDSKEIKNPYYP
KNMLTCGEVKASL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19389; Mature: 19389

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVLVIVFIFLSGLTQAQLTSKEEVAPELVQKREEQKKEITKNYLALKNSLITSDSLAV
CCHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
VKNAEALRNSLKNFKFKKLSLEQMNAATTTRKAISDLAAEMASTKNINKQRKIFETLSVK
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
YWEAASKFKAADAALYLQVCPMTGAVWTSDSKEIKNPYYPKNMLTCGEVKASL
HHHHHHHHHHHHHHEEEEECCCCCCEECCCCHHHCCCCCCCCCCCHHHHCCCC
>Mature Secondary Structure
MKKVLVIVFIFLSGLTQAQLTSKEEVAPELVQKREEQKKEITKNYLALKNSLITSDSLAV
CCHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
VKNAEALRNSLKNFKFKKLSLEQMNAATTTRKAISDLAAEMASTKNINKQRKIFETLSVK
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
YWEAASKFKAADAALYLQVCPMTGAVWTSDSKEIKNPYYPKNMLTCGEVKASL
HHHHHHHHHHHHHHEEEEECCCCCCEECCCCHHHCCCCCCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA