Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
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Accession | NC_009441 |
Length | 6,096,872 |
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The map label for this gene is 146301539
Identifier: 146301539
GI number: 146301539
Start: 4503001
End: 4505439
Strand: Reverse
Name: 146301539
Synonym: Fjoh_3800
Alternate gene names: NA
Gene position: 4505439-4503001 (Counterclockwise)
Preceding gene: 146301540
Following gene: 146301538
Centisome position: 73.9
GC content: 38.09
Gene sequence:
>2439_bases ATGAAGAAATTATTTATAATGCTGATCATGCTGTCTTTTGGACAGCATGGTTTTGCTCAAACTCCGGAAAAAAAAGCCGA CAGCACCAGCACGCAGCCAAAAGGAATGCAGGCTTACAATAAAGTGATCACAGATAAGGCCAAAAGCAAGTCGGGTCTTT TTATGGTAAGTCAGGTCGATACAAAATACTATTTTCAAATTCCAGACAGCTTGTTTAATCGTTATATGTTGGTAGTAACC CGTTATCTTTCGACTCCGGAAGGAATGGGAATTTTTGGAGGGGAAAAGGCCAACGAGCAGACTATTTATTTTGAAAAAGG GGCAAATAATACTGTTTTTTTAAGATCATTACAGTACAGACAAGATGTTCGTTCTGCTGACTCGATGCTGGCAAAAGCAT TGGCGGGAAGCAATGAAAATCCAATTGTTGCGGCTTTTCCAATCAAAACAACTAATCCGGATAACGGAAATGTGGTTATC GATGTAACCGATGTTTTCAAGAAAGACAACGCAATGTTTGCTATTGAAGGCAAAGAAAAAACAGAGAAAAAATTAACCTC TCTTGCTGATGATAAATCTTTTATTGAAAGTATAGATACCTATCCGATTAATATAGAAGTCAAGACAACAAAGACGTATA CAAGTTCTACAGCAAGCAGCGGCAGTATTACATTGCGATTAAATACTTCAATTGTATTGCTTCCAAAAACGCCAATGCGT AAACGTTTTTTTGATGAAAGAGTAGGGTATTTTGCTAATAAATATGTTTTGTTTGATGATGATGAACAAAGCGCACAGAA AAAATTTATTGTACAGCGTTACCGTTTAGAGCCTAAAGAGAAAGACATCAAAAAGTATCTAAGAGGCGAATTGGTCGAAC CAAAAAAACAGATCGTTTATTATATTGATCCTGCAACACCAAAAAAATGGCGTCCATACCTAATTGCAGGAATCAACGAT TGGCAGAAAGCTTTTGAAGCTGCAGGTTTTAAAAATGCAATTATAGGTAAAGAATGGCCGGAAAATGATCCAGCAATGAG TTTGGAAGATGCAAGATATTCTGTAGTACGATATCTGGCTTCTGAAACACCAAATGCTTATGGTCCCAGAATCAGCGATC CGAGAAGCGGAGAAATTATGGAAAGCCATGTTGGATGGTATCATAATGTGATGAAATTAGTCCAAAGATGGTACATGATT CAGGCAGGACCATTAGATGCAAGAGCCAGAAAAATGCATTTGGACGATGAATTGATGGGACAATTAATTCGTTTTGTTTC TTCGCACGAAATTGGGCATACCATTGGTCTGCGTCATAATATGGGGGCGAGCAGTGCGACTCCTGTAGAAAAACTTCGTG ATAAAAAATGGGTGGAAGAAAATGGTCATACCGTTTCTATTATGGATTATGCCCGCTTTAATTATGTAGCGCAGCCGGAA GATAACATTAGTCCAAAAGGAATTTACCCAAGAATAGGGATGTACGATAAATGGGCTGTAAAATGGGGTTATACCTATTA TCCAAACGCTGAAGATGAGTTTGAAGAAGAAAAGACCCTTGCTAAATTAACGACAGAAAGTTTAACGGCTAATCCTAAAT TATGGTTTGGAGGAGAAGGAAAAGACGAAGATCCTCGCAGTCAGTCAGAAGATTTGGGAGACGATTCTGTAAAGGCAAGC GATTATGGAATTAAAAACCTAAAACGAGTAGTTCCAAATCTGGTTGAATGGACCTATCAGCCAAACGATGCTTACGATAA CCTATCAGATATGCATAAAGCAGTTGTATCGCAATATAGCCGCTATTTGTATCATGTATTGAAAAACATTGGCAATAATT ATGTAACCAAAAGAACGGTTGACGAAAAAGGAGCGGTTTATCAGCCAATTCCAAAAGCAAAAGTAAAGGCAGCTGTTGAT TATGTTGGCAGACAATTGTTTACAGCACCATTATGGATGTATCCAAAGGAAATTGAACAGCTTATTGCGTTGAAAACGGC AGACCAAATATCAGATCAGCAGAATCAGGTTTTAAATATGCTTTTGAGTTCCGGAATGCTTTACAACATTAGTGTGAAAG CCATACAGTTTGAAGGAGCTTACACCGTTCCGGAGTTTTTAAATGATCTGGAGCAGACGGTTTGGGTAAAATTCAGCGGT GACGAAAAACAAGATTTTTACAGAAGAAGTTTGCAGCGCGCTTATGTCGAAAAATTAGGCATGCTTTTACTGCCAAAAGA ATTAGAGCCTGGAAAAGCAGCCAATGCAGCGCAGCGCAGCGATGTGAGATTGTACGCGAAACAGCACTTAGTAAAATTAA GAGATGATGTTGTTAAGTTAATGAACGGAACATCAGGTTTAAGTAAAGATCATTACGAAGCAATCTTGATCGAAATGGAC AAAATAGTTACAAAATTAAACTCAATTACAACGATATGA
Upstream 100 bases:
>100_bases CCAACTCTCGATTGTATATTATTCCGTTTCCATTATCTGCTTTGCAGAAAAACCCGAAATTGACCCTAAACACAGACGAA AAACTTCCATTTTAATTTAG
Downstream 100 bases:
>100_bases AAAAAGTATTAGTGATCGTATTCATCTTCTTAAGCGGTCTGACTCAGGCCCAACTAACATCAAAAGAAGAAGTAGCGCCA GAATTGGTTCAAAAAAGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 812; Mature: 812
Protein sequence:
>812_residues MKKLFIMLIMLSFGQHGFAQTPEKKADSTSTQPKGMQAYNKVITDKAKSKSGLFMVSQVDTKYYFQIPDSLFNRYMLVVT RYLSTPEGMGIFGGEKANEQTIYFEKGANNTVFLRSLQYRQDVRSADSMLAKALAGSNENPIVAAFPIKTTNPDNGNVVI DVTDVFKKDNAMFAIEGKEKTEKKLTSLADDKSFIESIDTYPINIEVKTTKTYTSSTASSGSITLRLNTSIVLLPKTPMR KRFFDERVGYFANKYVLFDDDEQSAQKKFIVQRYRLEPKEKDIKKYLRGELVEPKKQIVYYIDPATPKKWRPYLIAGIND WQKAFEAAGFKNAIIGKEWPENDPAMSLEDARYSVVRYLASETPNAYGPRISDPRSGEIMESHVGWYHNVMKLVQRWYMI QAGPLDARARKMHLDDELMGQLIRFVSSHEIGHTIGLRHNMGASSATPVEKLRDKKWVEENGHTVSIMDYARFNYVAQPE DNISPKGIYPRIGMYDKWAVKWGYTYYPNAEDEFEEEKTLAKLTTESLTANPKLWFGGEGKDEDPRSQSEDLGDDSVKAS DYGIKNLKRVVPNLVEWTYQPNDAYDNLSDMHKAVVSQYSRYLYHVLKNIGNNYVTKRTVDEKGAVYQPIPKAKVKAAVD YVGRQLFTAPLWMYPKEIEQLIALKTADQISDQQNQVLNMLLSSGMLYNISVKAIQFEGAYTVPEFLNDLEQTVWVKFSG DEKQDFYRRSLQRAYVEKLGMLLLPKELEPGKAANAAQRSDVRLYAKQHLVKLRDDVVKLMNGTSGLSKDHYEAILIEMD KIVTKLNSITTI
Sequences:
>Translated_812_residues MKKLFIMLIMLSFGQHGFAQTPEKKADSTSTQPKGMQAYNKVITDKAKSKSGLFMVSQVDTKYYFQIPDSLFNRYMLVVT RYLSTPEGMGIFGGEKANEQTIYFEKGANNTVFLRSLQYRQDVRSADSMLAKALAGSNENPIVAAFPIKTTNPDNGNVVI DVTDVFKKDNAMFAIEGKEKTEKKLTSLADDKSFIESIDTYPINIEVKTTKTYTSSTASSGSITLRLNTSIVLLPKTPMR KRFFDERVGYFANKYVLFDDDEQSAQKKFIVQRYRLEPKEKDIKKYLRGELVEPKKQIVYYIDPATPKKWRPYLIAGIND WQKAFEAAGFKNAIIGKEWPENDPAMSLEDARYSVVRYLASETPNAYGPRISDPRSGEIMESHVGWYHNVMKLVQRWYMI QAGPLDARARKMHLDDELMGQLIRFVSSHEIGHTIGLRHNMGASSATPVEKLRDKKWVEENGHTVSIMDYARFNYVAQPE DNISPKGIYPRIGMYDKWAVKWGYTYYPNAEDEFEEEKTLAKLTTESLTANPKLWFGGEGKDEDPRSQSEDLGDDSVKAS DYGIKNLKRVVPNLVEWTYQPNDAYDNLSDMHKAVVSQYSRYLYHVLKNIGNNYVTKRTVDEKGAVYQPIPKAKVKAAVD YVGRQLFTAPLWMYPKEIEQLIALKTADQISDQQNQVLNMLLSSGMLYNISVKAIQFEGAYTVPEFLNDLEQTVWVKFSG DEKQDFYRRSLQRAYVEKLGMLLLPKELEPGKAANAAQRSDVRLYAKQHLVKLRDDVVKLMNGTSGLSKDHYEAILIEMD KIVTKLNSITTI >Mature_812_residues MKKLFIMLIMLSFGQHGFAQTPEKKADSTSTQPKGMQAYNKVITDKAKSKSGLFMVSQVDTKYYFQIPDSLFNRYMLVVT RYLSTPEGMGIFGGEKANEQTIYFEKGANNTVFLRSLQYRQDVRSADSMLAKALAGSNENPIVAAFPIKTTNPDNGNVVI DVTDVFKKDNAMFAIEGKEKTEKKLTSLADDKSFIESIDTYPINIEVKTTKTYTSSTASSGSITLRLNTSIVLLPKTPMR KRFFDERVGYFANKYVLFDDDEQSAQKKFIVQRYRLEPKEKDIKKYLRGELVEPKKQIVYYIDPATPKKWRPYLIAGIND WQKAFEAAGFKNAIIGKEWPENDPAMSLEDARYSVVRYLASETPNAYGPRISDPRSGEIMESHVGWYHNVMKLVQRWYMI QAGPLDARARKMHLDDELMGQLIRFVSSHEIGHTIGLRHNMGASSATPVEKLRDKKWVEENGHTVSIMDYARFNYVAQPE DNISPKGIYPRIGMYDKWAVKWGYTYYPNAEDEFEEEKTLAKLTTESLTANPKLWFGGEGKDEDPRSQSEDLGDDSVKAS DYGIKNLKRVVPNLVEWTYQPNDAYDNLSDMHKAVVSQYSRYLYHVLKNIGNNYVTKRTVDEKGAVYQPIPKAKVKAAVD YVGRQLFTAPLWMYPKEIEQLIALKTADQISDQQNQVLNMLLSSGMLYNISVKAIQFEGAYTVPEFLNDLEQTVWVKFSG DEKQDFYRRSLQRAYVEKLGMLLLPKELEPGKAANAAQRSDVRLYAKQHLVKLRDDVVKLMNGTSGLSKDHYEAILIEMD KIVTKLNSITTI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 92673; Mature: 92673
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLFIMLIMLSFGQHGFAQTPEKKADSTSTQPKGMQAYNKVITDKAKSKSGLFMVSQVD CHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECC TKYYFQIPDSLFNRYMLVVTRYLSTPEGMGIFGGEKANEQTIYFEKGANNTVFLRSLQYR CEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEHHHHH QDVRSADSMLAKALAGSNENPIVAAFPIKTTNPDNGNVVIDVTDVFKKDNAMFAIEGKEK HHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCEEEEEHHHHCCCCCEEEEECCHH TEKKLTSLADDKSFIESIDTYPINIEVKTTKTYTSSTASSGSITLRLNTSIVLLPKTPMR HHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCEEEEEECCEEEEECCCCHH KRFFDERVGYFANKYVLFDDDEQSAQKKFIVQRYRLEPKEKDIKKYLRGELVEPKKQIVY HHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEE YIDPATPKKWRPYLIAGINDWQKAFEAAGFKNAIIGKEWPENDPAMSLEDARYSVVRYLA EECCCCCCCCCCEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH SETPNAYGPRISDPRSGEIMESHVGWYHNVMKLVQRWYMIQAGPLDARARKMHLDDELMG HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHCCCCHHHHH QLIRFVSSHEIGHTIGLRHNMGASSATPVEKLRDKKWVEENGHTVSIMDYARFNYVAQPE HHHHHHHCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEHHHHCEEECCC DNISPKGIYPRIGMYDKWAVKWGYTYYPNAEDEFEEEKTLAKLTTESLTANPKLWFGGEG CCCCCCCCCCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCC KDEDPRSQSEDLGDDSVKASDYGIKNLKRVVPNLVEWTYQPNDAYDNLSDMHKAVVSQYS CCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHH RYLYHVLKNIGNNYVTKRTVDEKGAVYQPIPKAKVKAAVDYVGRQLFTAPLWMYPKEIEQ HHHHHHHHHHCCCCEEECCCCCCCCEECCCCHHHHHHHHHHHHHHHHHCHHHCCHHHHHH LIALKTADQISDQQNQVLNMLLSSGMLYNISVKAIQFEGAYTVPEFLNDLEQTVWVKFSG HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCHHHHHHHHHHEEEEEECC DEKQDFYRRSLQRAYVEKLGMLLLPKELEPGKAANAAQRSDVRLYAKQHLVKLRDDVVKL CCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH MNGTSGLSKDHYEAILIEMDKIVTKLNSITTI HCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKLFIMLIMLSFGQHGFAQTPEKKADSTSTQPKGMQAYNKVITDKAKSKSGLFMVSQVD CHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECC TKYYFQIPDSLFNRYMLVVTRYLSTPEGMGIFGGEKANEQTIYFEKGANNTVFLRSLQYR CEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEHHHHH QDVRSADSMLAKALAGSNENPIVAAFPIKTTNPDNGNVVIDVTDVFKKDNAMFAIEGKEK HHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCEEEEEHHHHCCCCCEEEEECCHH TEKKLTSLADDKSFIESIDTYPINIEVKTTKTYTSSTASSGSITLRLNTSIVLLPKTPMR HHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCEEEEEECCEEEEECCCCHH KRFFDERVGYFANKYVLFDDDEQSAQKKFIVQRYRLEPKEKDIKKYLRGELVEPKKQIVY HHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEE YIDPATPKKWRPYLIAGINDWQKAFEAAGFKNAIIGKEWPENDPAMSLEDARYSVVRYLA EECCCCCCCCCCEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH SETPNAYGPRISDPRSGEIMESHVGWYHNVMKLVQRWYMIQAGPLDARARKMHLDDELMG HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHCCCCHHHHH QLIRFVSSHEIGHTIGLRHNMGASSATPVEKLRDKKWVEENGHTVSIMDYARFNYVAQPE HHHHHHHCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEHHHHCEEECCC DNISPKGIYPRIGMYDKWAVKWGYTYYPNAEDEFEEEKTLAKLTTESLTANPKLWFGGEG CCCCCCCCCCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCC KDEDPRSQSEDLGDDSVKASDYGIKNLKRVVPNLVEWTYQPNDAYDNLSDMHKAVVSQYS CCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHH RYLYHVLKNIGNNYVTKRTVDEKGAVYQPIPKAKVKAAVDYVGRQLFTAPLWMYPKEIEQ HHHHHHHHHHCCCCEEECCCCCCCCEECCCCHHHHHHHHHHHHHHHHHCHHHCCHHHHHH LIALKTADQISDQQNQVLNMLLSSGMLYNISVKAIQFEGAYTVPEFLNDLEQTVWVKFSG HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCHHHHHHHHHHEEEEEECC DEKQDFYRRSLQRAYVEKLGMLLLPKELEPGKAANAAQRSDVRLYAKQHLVKLRDDVVKL CCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH MNGTSGLSKDHYEAILIEMDKIVTKLNSITTI HCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA