Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146301539

Identifier: 146301539

GI number: 146301539

Start: 4503001

End: 4505439

Strand: Reverse

Name: 146301539

Synonym: Fjoh_3800

Alternate gene names: NA

Gene position: 4505439-4503001 (Counterclockwise)

Preceding gene: 146301540

Following gene: 146301538

Centisome position: 73.9

GC content: 38.09

Gene sequence:

>2439_bases
ATGAAGAAATTATTTATAATGCTGATCATGCTGTCTTTTGGACAGCATGGTTTTGCTCAAACTCCGGAAAAAAAAGCCGA
CAGCACCAGCACGCAGCCAAAAGGAATGCAGGCTTACAATAAAGTGATCACAGATAAGGCCAAAAGCAAGTCGGGTCTTT
TTATGGTAAGTCAGGTCGATACAAAATACTATTTTCAAATTCCAGACAGCTTGTTTAATCGTTATATGTTGGTAGTAACC
CGTTATCTTTCGACTCCGGAAGGAATGGGAATTTTTGGAGGGGAAAAGGCCAACGAGCAGACTATTTATTTTGAAAAAGG
GGCAAATAATACTGTTTTTTTAAGATCATTACAGTACAGACAAGATGTTCGTTCTGCTGACTCGATGCTGGCAAAAGCAT
TGGCGGGAAGCAATGAAAATCCAATTGTTGCGGCTTTTCCAATCAAAACAACTAATCCGGATAACGGAAATGTGGTTATC
GATGTAACCGATGTTTTCAAGAAAGACAACGCAATGTTTGCTATTGAAGGCAAAGAAAAAACAGAGAAAAAATTAACCTC
TCTTGCTGATGATAAATCTTTTATTGAAAGTATAGATACCTATCCGATTAATATAGAAGTCAAGACAACAAAGACGTATA
CAAGTTCTACAGCAAGCAGCGGCAGTATTACATTGCGATTAAATACTTCAATTGTATTGCTTCCAAAAACGCCAATGCGT
AAACGTTTTTTTGATGAAAGAGTAGGGTATTTTGCTAATAAATATGTTTTGTTTGATGATGATGAACAAAGCGCACAGAA
AAAATTTATTGTACAGCGTTACCGTTTAGAGCCTAAAGAGAAAGACATCAAAAAGTATCTAAGAGGCGAATTGGTCGAAC
CAAAAAAACAGATCGTTTATTATATTGATCCTGCAACACCAAAAAAATGGCGTCCATACCTAATTGCAGGAATCAACGAT
TGGCAGAAAGCTTTTGAAGCTGCAGGTTTTAAAAATGCAATTATAGGTAAAGAATGGCCGGAAAATGATCCAGCAATGAG
TTTGGAAGATGCAAGATATTCTGTAGTACGATATCTGGCTTCTGAAACACCAAATGCTTATGGTCCCAGAATCAGCGATC
CGAGAAGCGGAGAAATTATGGAAAGCCATGTTGGATGGTATCATAATGTGATGAAATTAGTCCAAAGATGGTACATGATT
CAGGCAGGACCATTAGATGCAAGAGCCAGAAAAATGCATTTGGACGATGAATTGATGGGACAATTAATTCGTTTTGTTTC
TTCGCACGAAATTGGGCATACCATTGGTCTGCGTCATAATATGGGGGCGAGCAGTGCGACTCCTGTAGAAAAACTTCGTG
ATAAAAAATGGGTGGAAGAAAATGGTCATACCGTTTCTATTATGGATTATGCCCGCTTTAATTATGTAGCGCAGCCGGAA
GATAACATTAGTCCAAAAGGAATTTACCCAAGAATAGGGATGTACGATAAATGGGCTGTAAAATGGGGTTATACCTATTA
TCCAAACGCTGAAGATGAGTTTGAAGAAGAAAAGACCCTTGCTAAATTAACGACAGAAAGTTTAACGGCTAATCCTAAAT
TATGGTTTGGAGGAGAAGGAAAAGACGAAGATCCTCGCAGTCAGTCAGAAGATTTGGGAGACGATTCTGTAAAGGCAAGC
GATTATGGAATTAAAAACCTAAAACGAGTAGTTCCAAATCTGGTTGAATGGACCTATCAGCCAAACGATGCTTACGATAA
CCTATCAGATATGCATAAAGCAGTTGTATCGCAATATAGCCGCTATTTGTATCATGTATTGAAAAACATTGGCAATAATT
ATGTAACCAAAAGAACGGTTGACGAAAAAGGAGCGGTTTATCAGCCAATTCCAAAAGCAAAAGTAAAGGCAGCTGTTGAT
TATGTTGGCAGACAATTGTTTACAGCACCATTATGGATGTATCCAAAGGAAATTGAACAGCTTATTGCGTTGAAAACGGC
AGACCAAATATCAGATCAGCAGAATCAGGTTTTAAATATGCTTTTGAGTTCCGGAATGCTTTACAACATTAGTGTGAAAG
CCATACAGTTTGAAGGAGCTTACACCGTTCCGGAGTTTTTAAATGATCTGGAGCAGACGGTTTGGGTAAAATTCAGCGGT
GACGAAAAACAAGATTTTTACAGAAGAAGTTTGCAGCGCGCTTATGTCGAAAAATTAGGCATGCTTTTACTGCCAAAAGA
ATTAGAGCCTGGAAAAGCAGCCAATGCAGCGCAGCGCAGCGATGTGAGATTGTACGCGAAACAGCACTTAGTAAAATTAA
GAGATGATGTTGTTAAGTTAATGAACGGAACATCAGGTTTAAGTAAAGATCATTACGAAGCAATCTTGATCGAAATGGAC
AAAATAGTTACAAAATTAAACTCAATTACAACGATATGA

Upstream 100 bases:

>100_bases
CCAACTCTCGATTGTATATTATTCCGTTTCCATTATCTGCTTTGCAGAAAAACCCGAAATTGACCCTAAACACAGACGAA
AAACTTCCATTTTAATTTAG

Downstream 100 bases:

>100_bases
AAAAAGTATTAGTGATCGTATTCATCTTCTTAAGCGGTCTGACTCAGGCCCAACTAACATCAAAAGAAGAAGTAGCGCCA
GAATTGGTTCAAAAAAGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 812; Mature: 812

Protein sequence:

>812_residues
MKKLFIMLIMLSFGQHGFAQTPEKKADSTSTQPKGMQAYNKVITDKAKSKSGLFMVSQVDTKYYFQIPDSLFNRYMLVVT
RYLSTPEGMGIFGGEKANEQTIYFEKGANNTVFLRSLQYRQDVRSADSMLAKALAGSNENPIVAAFPIKTTNPDNGNVVI
DVTDVFKKDNAMFAIEGKEKTEKKLTSLADDKSFIESIDTYPINIEVKTTKTYTSSTASSGSITLRLNTSIVLLPKTPMR
KRFFDERVGYFANKYVLFDDDEQSAQKKFIVQRYRLEPKEKDIKKYLRGELVEPKKQIVYYIDPATPKKWRPYLIAGIND
WQKAFEAAGFKNAIIGKEWPENDPAMSLEDARYSVVRYLASETPNAYGPRISDPRSGEIMESHVGWYHNVMKLVQRWYMI
QAGPLDARARKMHLDDELMGQLIRFVSSHEIGHTIGLRHNMGASSATPVEKLRDKKWVEENGHTVSIMDYARFNYVAQPE
DNISPKGIYPRIGMYDKWAVKWGYTYYPNAEDEFEEEKTLAKLTTESLTANPKLWFGGEGKDEDPRSQSEDLGDDSVKAS
DYGIKNLKRVVPNLVEWTYQPNDAYDNLSDMHKAVVSQYSRYLYHVLKNIGNNYVTKRTVDEKGAVYQPIPKAKVKAAVD
YVGRQLFTAPLWMYPKEIEQLIALKTADQISDQQNQVLNMLLSSGMLYNISVKAIQFEGAYTVPEFLNDLEQTVWVKFSG
DEKQDFYRRSLQRAYVEKLGMLLLPKELEPGKAANAAQRSDVRLYAKQHLVKLRDDVVKLMNGTSGLSKDHYEAILIEMD
KIVTKLNSITTI

Sequences:

>Translated_812_residues
MKKLFIMLIMLSFGQHGFAQTPEKKADSTSTQPKGMQAYNKVITDKAKSKSGLFMVSQVDTKYYFQIPDSLFNRYMLVVT
RYLSTPEGMGIFGGEKANEQTIYFEKGANNTVFLRSLQYRQDVRSADSMLAKALAGSNENPIVAAFPIKTTNPDNGNVVI
DVTDVFKKDNAMFAIEGKEKTEKKLTSLADDKSFIESIDTYPINIEVKTTKTYTSSTASSGSITLRLNTSIVLLPKTPMR
KRFFDERVGYFANKYVLFDDDEQSAQKKFIVQRYRLEPKEKDIKKYLRGELVEPKKQIVYYIDPATPKKWRPYLIAGIND
WQKAFEAAGFKNAIIGKEWPENDPAMSLEDARYSVVRYLASETPNAYGPRISDPRSGEIMESHVGWYHNVMKLVQRWYMI
QAGPLDARARKMHLDDELMGQLIRFVSSHEIGHTIGLRHNMGASSATPVEKLRDKKWVEENGHTVSIMDYARFNYVAQPE
DNISPKGIYPRIGMYDKWAVKWGYTYYPNAEDEFEEEKTLAKLTTESLTANPKLWFGGEGKDEDPRSQSEDLGDDSVKAS
DYGIKNLKRVVPNLVEWTYQPNDAYDNLSDMHKAVVSQYSRYLYHVLKNIGNNYVTKRTVDEKGAVYQPIPKAKVKAAVD
YVGRQLFTAPLWMYPKEIEQLIALKTADQISDQQNQVLNMLLSSGMLYNISVKAIQFEGAYTVPEFLNDLEQTVWVKFSG
DEKQDFYRRSLQRAYVEKLGMLLLPKELEPGKAANAAQRSDVRLYAKQHLVKLRDDVVKLMNGTSGLSKDHYEAILIEMD
KIVTKLNSITTI
>Mature_812_residues
MKKLFIMLIMLSFGQHGFAQTPEKKADSTSTQPKGMQAYNKVITDKAKSKSGLFMVSQVDTKYYFQIPDSLFNRYMLVVT
RYLSTPEGMGIFGGEKANEQTIYFEKGANNTVFLRSLQYRQDVRSADSMLAKALAGSNENPIVAAFPIKTTNPDNGNVVI
DVTDVFKKDNAMFAIEGKEKTEKKLTSLADDKSFIESIDTYPINIEVKTTKTYTSSTASSGSITLRLNTSIVLLPKTPMR
KRFFDERVGYFANKYVLFDDDEQSAQKKFIVQRYRLEPKEKDIKKYLRGELVEPKKQIVYYIDPATPKKWRPYLIAGIND
WQKAFEAAGFKNAIIGKEWPENDPAMSLEDARYSVVRYLASETPNAYGPRISDPRSGEIMESHVGWYHNVMKLVQRWYMI
QAGPLDARARKMHLDDELMGQLIRFVSSHEIGHTIGLRHNMGASSATPVEKLRDKKWVEENGHTVSIMDYARFNYVAQPE
DNISPKGIYPRIGMYDKWAVKWGYTYYPNAEDEFEEEKTLAKLTTESLTANPKLWFGGEGKDEDPRSQSEDLGDDSVKAS
DYGIKNLKRVVPNLVEWTYQPNDAYDNLSDMHKAVVSQYSRYLYHVLKNIGNNYVTKRTVDEKGAVYQPIPKAKVKAAVD
YVGRQLFTAPLWMYPKEIEQLIALKTADQISDQQNQVLNMLLSSGMLYNISVKAIQFEGAYTVPEFLNDLEQTVWVKFSG
DEKQDFYRRSLQRAYVEKLGMLLLPKELEPGKAANAAQRSDVRLYAKQHLVKLRDDVVKLMNGTSGLSKDHYEAILIEMD
KIVTKLNSITTI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 92673; Mature: 92673

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLFIMLIMLSFGQHGFAQTPEKKADSTSTQPKGMQAYNKVITDKAKSKSGLFMVSQVD
CHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECC
TKYYFQIPDSLFNRYMLVVTRYLSTPEGMGIFGGEKANEQTIYFEKGANNTVFLRSLQYR
CEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEHHHHH
QDVRSADSMLAKALAGSNENPIVAAFPIKTTNPDNGNVVIDVTDVFKKDNAMFAIEGKEK
HHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCEEEEEHHHHCCCCCEEEEECCHH
TEKKLTSLADDKSFIESIDTYPINIEVKTTKTYTSSTASSGSITLRLNTSIVLLPKTPMR
HHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCEEEEEECCEEEEECCCCHH
KRFFDERVGYFANKYVLFDDDEQSAQKKFIVQRYRLEPKEKDIKKYLRGELVEPKKQIVY
HHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEE
YIDPATPKKWRPYLIAGINDWQKAFEAAGFKNAIIGKEWPENDPAMSLEDARYSVVRYLA
EECCCCCCCCCCEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
SETPNAYGPRISDPRSGEIMESHVGWYHNVMKLVQRWYMIQAGPLDARARKMHLDDELMG
HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHCCCCHHHHH
QLIRFVSSHEIGHTIGLRHNMGASSATPVEKLRDKKWVEENGHTVSIMDYARFNYVAQPE
HHHHHHHCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEHHHHCEEECCC
DNISPKGIYPRIGMYDKWAVKWGYTYYPNAEDEFEEEKTLAKLTTESLTANPKLWFGGEG
CCCCCCCCCCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCC
KDEDPRSQSEDLGDDSVKASDYGIKNLKRVVPNLVEWTYQPNDAYDNLSDMHKAVVSQYS
CCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHH
RYLYHVLKNIGNNYVTKRTVDEKGAVYQPIPKAKVKAAVDYVGRQLFTAPLWMYPKEIEQ
HHHHHHHHHHCCCCEEECCCCCCCCEECCCCHHHHHHHHHHHHHHHHHCHHHCCHHHHHH
LIALKTADQISDQQNQVLNMLLSSGMLYNISVKAIQFEGAYTVPEFLNDLEQTVWVKFSG
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCHHHHHHHHHHEEEEEECC
DEKQDFYRRSLQRAYVEKLGMLLLPKELEPGKAANAAQRSDVRLYAKQHLVKLRDDVVKL
CCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
MNGTSGLSKDHYEAILIEMDKIVTKLNSITTI
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKLFIMLIMLSFGQHGFAQTPEKKADSTSTQPKGMQAYNKVITDKAKSKSGLFMVSQVD
CHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECC
TKYYFQIPDSLFNRYMLVVTRYLSTPEGMGIFGGEKANEQTIYFEKGANNTVFLRSLQYR
CEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEHHHHH
QDVRSADSMLAKALAGSNENPIVAAFPIKTTNPDNGNVVIDVTDVFKKDNAMFAIEGKEK
HHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCEEEEEHHHHCCCCCEEEEECCHH
TEKKLTSLADDKSFIESIDTYPINIEVKTTKTYTSSTASSGSITLRLNTSIVLLPKTPMR
HHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCEEEEEECCEEEEECCCCHH
KRFFDERVGYFANKYVLFDDDEQSAQKKFIVQRYRLEPKEKDIKKYLRGELVEPKKQIVY
HHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEE
YIDPATPKKWRPYLIAGINDWQKAFEAAGFKNAIIGKEWPENDPAMSLEDARYSVVRYLA
EECCCCCCCCCCEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
SETPNAYGPRISDPRSGEIMESHVGWYHNVMKLVQRWYMIQAGPLDARARKMHLDDELMG
HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHCCCCHHHHH
QLIRFVSSHEIGHTIGLRHNMGASSATPVEKLRDKKWVEENGHTVSIMDYARFNYVAQPE
HHHHHHHCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEHHHHCEEECCC
DNISPKGIYPRIGMYDKWAVKWGYTYYPNAEDEFEEEKTLAKLTTESLTANPKLWFGGEG
CCCCCCCCCCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCC
KDEDPRSQSEDLGDDSVKASDYGIKNLKRVVPNLVEWTYQPNDAYDNLSDMHKAVVSQYS
CCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHH
RYLYHVLKNIGNNYVTKRTVDEKGAVYQPIPKAKVKAAVDYVGRQLFTAPLWMYPKEIEQ
HHHHHHHHHHCCCCEEECCCCCCCCEECCCCHHHHHHHHHHHHHHHHHCHHHCCHHHHHH
LIALKTADQISDQQNQVLNMLLSSGMLYNISVKAIQFEGAYTVPEFLNDLEQTVWVKFSG
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCHHHHHHHHHHEEEEEECC
DEKQDFYRRSLQRAYVEKLGMLLLPKELEPGKAANAAQRSDVRLYAKQHLVKLRDDVVKL
CCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
MNGTSGLSKDHYEAILIEMDKIVTKLNSITTI
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA