Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is resA [H]

Identifier: 146301532

GI number: 146301532

Start: 4496368

End: 4497549

Strand: Reverse

Name: resA [H]

Synonym: Fjoh_3793

Alternate gene names: 146301532

Gene position: 4497549-4496368 (Counterclockwise)

Preceding gene: 146301538

Following gene: 146301528

Centisome position: 73.77

GC content: 34.94

Gene sequence:

>1182_bases
ATGTTCAAACCGGCTCTTCTTCTTTTTTTAGTTTCCATTTCTCTATCTGCCCAGAAATTAGGCAATAGAACCGCATTCGA
ACTAAGGGGTGCAGGTAAAGGATTAAGTATTGATAAGATCTACCTGGTTTACGAAGTTGGCGACAAAAGAATTTATGACT
CAGTTAAAATAGATAATAGCAAATTTATTTTGAAAGGAAATATCGATTATCCCATTAGAGCCACTTTATGCAATAATCGA
GAGTTTAGTATGAGCAAAAGTAATTCTATAGAATTGTTCCTTGAACCAGCGATAATGGAAATTAAGTTAGATTTTTATGA
TTTTTCAACAGCAGAGATGAAGGGCAGTAAAACACAAGACGAATATTCCCAGCTTCAAAAAGTAAAAAATGTCGTATTTA
GTAAAAGAGATTCTATCTCATTGCTTATAAGATCGTATTTTGACAGGATCACTGCCGCCTCAGACCCGCAGATTAAATTG
GAACTGGAACATCAATTGGAAATTTTGGAAAAGCTGTCAGATGAAAATAAAATCGCAGAAATGGAGATAGATTTTAATTT
TATCAGACAGAATCCATCTTCGTTTACAGCGCCCTCTTTACTTTATTACAGATTGGCTAAGAAAGAAGGGCTTTTACATT
CTGAAACTATTATATCTCTTGCTGATGGGTTGTCAAAAGAAGTAAAAGAATCTCCGTTGGGAGTAAGGCTTTTTAAAAGG
ATTTCTGATTTTAAGAACAGTAAAGTGGGAAGCATTGCTCCTGATTTCATATTAAAGGATTACAATGGACAGATAGTGTC
TTTGGGTTCCTTTCGGGAAAAAAAATATGTTCTGATAGATTTCTGGGCAAGTTGGTGCGGGCCTTGCAGGCAAGACCTGC
CTTTTCTTAAAGATGCCTATGAGAAATATAAAGATATGGGATTTGAAATTATCAGCATATCGAGAGACAATAATCTGAAT
TCATGGAGAAAAGCAATAGTCGATGAAAAAATAGGATTTTGGAAGCATATATCCGTTGCCGAAAATCAGACAAAAATGGA
AGATAATTACCTTGTTACGGCAATTCCTGTCAAGATTCTGATTAACAAACGGGGCGAAATAATTCGACGATGGAAAGGTG
GTGGAGATGAAAACAAAATGCAATTAAAAAAAATACTTGAAGAAACTTTTGACAGAGATTAG

Upstream 100 bases:

>100_bases
GTTCCTTTGACATTAAAATTTAGAGATGCCAATGCAGTATTTTTAAAAAAAACTGCTTTTTGACTGTTCTGAAATCAACT
GTTTAGAAAATACAAAAAAA

Downstream 100 bases:

>100_bases
ATTCTATAAAACATTTAGATAACCCCCTTAATATACGACCGAAAACTTTGCGTATCTTTTTCAGTATTTAGAAAAAGAAG
AATTGCCAATTGATAAATGA

Product: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MFKPALLLFLVSISLSAQKLGNRTAFELRGAGKGLSIDKIYLVYEVGDKRIYDSVKIDNSKFILKGNIDYPIRATLCNNR
EFSMSKSNSIELFLEPAIMEIKLDFYDFSTAEMKGSKTQDEYSQLQKVKNVVFSKRDSISLLIRSYFDRITAASDPQIKL
ELEHQLEILEKLSDENKIAEMEIDFNFIRQNPSSFTAPSLLYYRLAKKEGLLHSETIISLADGLSKEVKESPLGVRLFKR
ISDFKNSKVGSIAPDFILKDYNGQIVSLGSFREKKYVLIDFWASWCGPCRQDLPFLKDAYEKYKDMGFEIISISRDNNLN
SWRKAIVDEKIGFWKHISVAENQTKMEDNYLVTAIPVKILINKRGEIIRRWKGGGDENKMQLKKILEETFDRD

Sequences:

>Translated_393_residues
MFKPALLLFLVSISLSAQKLGNRTAFELRGAGKGLSIDKIYLVYEVGDKRIYDSVKIDNSKFILKGNIDYPIRATLCNNR
EFSMSKSNSIELFLEPAIMEIKLDFYDFSTAEMKGSKTQDEYSQLQKVKNVVFSKRDSISLLIRSYFDRITAASDPQIKL
ELEHQLEILEKLSDENKIAEMEIDFNFIRQNPSSFTAPSLLYYRLAKKEGLLHSETIISLADGLSKEVKESPLGVRLFKR
ISDFKNSKVGSIAPDFILKDYNGQIVSLGSFREKKYVLIDFWASWCGPCRQDLPFLKDAYEKYKDMGFEIISISRDNNLN
SWRKAIVDEKIGFWKHISVAENQTKMEDNYLVTAIPVKILINKRGEIIRRWKGGGDENKMQLKKILEETFDRD
>Mature_393_residues
MFKPALLLFLVSISLSAQKLGNRTAFELRGAGKGLSIDKIYLVYEVGDKRIYDSVKIDNSKFILKGNIDYPIRATLCNNR
EFSMSKSNSIELFLEPAIMEIKLDFYDFSTAEMKGSKTQDEYSQLQKVKNVVFSKRDSISLLIRSYFDRITAASDPQIKL
ELEHQLEILEKLSDENKIAEMEIDFNFIRQNPSSFTAPSLLYYRLAKKEGLLHSETIISLADGLSKEVKESPLGVRLFKR
ISDFKNSKVGSIAPDFILKDYNGQIVSLGSFREKKYVLIDFWASWCGPCRQDLPFLKDAYEKYKDMGFEIISISRDNNLN
SWRKAIVDEKIGFWKHISVAENQTKMEDNYLVTAIPVKILINKRGEIIRRWKGGGDENKMQLKKILEETFDRD

Specific function: Thiol-disulfide oxidoreductase which is required in disulfide reduction during c-type cytochrome synthesis. May accept reducing equivalents from CcdA, leading to breakage of disulfide bonds in apocytochrome c; following this reduction heme can be covalent

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein. Note=The thioredoxin-like motif is exposed on the outside of the membrane (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA [H]

EC number: NA

Molecular weight: Translated: 45282; Mature: 45282

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: PS00194 THIOREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKPALLLFLVSISLSAQKLGNRTAFELRGAGKGLSIDKIYLVYEVGDKRIYDSVKIDNS
CCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEEEEECCCEEECCEEECCC
KFILKGNIDYPIRATLCNNREFSMSKSNSIELFLEPAIMEIKLDFYDFSTAEMKGSKTQD
EEEEECCCCCCEEEEEECCCCCCCCCCCCEEEEEECEEEEEEEEEEECCHHHCCCCCCHH
EYSQLQKVKNVVFSKRDSISLLIRSYFDRITAASDPQIKLELEHQLEILEKLSDENKIAE
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHCCCCCEEE
MEIDFNFIRQNPSSFTAPSLLYYRLAKKEGLLHSETIISLADGLSKEVKESPLGVRLFKR
EEEEEHEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH
ISDFKNSKVGSIAPDFILKDYNGQIVSLGSFREKKYVLIDFWASWCGPCRQDLPFLKDAY
HHHHCCCCCCCCCCCCEEECCCCCEEEECCCCCCCEEEEEEHHHHCCCHHHCCHHHHHHH
EKYKDMGFEIISISRDNNLNSWRKAIVDEKIGFWKHISVAENQTKMEDNYLVTAIPVKIL
HHHHHCCEEEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEEEEEEE
INKRGEIIRRWKGGGDENKMQLKKILEETFDRD
ECCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFKPALLLFLVSISLSAQKLGNRTAFELRGAGKGLSIDKIYLVYEVGDKRIYDSVKIDNS
CCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEEEEECCCEEECCEEECCC
KFILKGNIDYPIRATLCNNREFSMSKSNSIELFLEPAIMEIKLDFYDFSTAEMKGSKTQD
EEEEECCCCCCEEEEEECCCCCCCCCCCCEEEEEECEEEEEEEEEEECCHHHCCCCCCHH
EYSQLQKVKNVVFSKRDSISLLIRSYFDRITAASDPQIKLELEHQLEILEKLSDENKIAE
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHCCCCCEEE
MEIDFNFIRQNPSSFTAPSLLYYRLAKKEGLLHSETIISLADGLSKEVKESPLGVRLFKR
EEEEEHEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH
ISDFKNSKVGSIAPDFILKDYNGQIVSLGSFREKKYVLIDFWASWCGPCRQDLPFLKDAY
HHHHCCCCCCCCCCCCEEECCCCCEEEECCCCCCCEEEEEEHHHHCCCHHHCCHHHHHHH
EKYKDMGFEIISISRDNNLNSWRKAIVDEKIGFWKHISVAENQTKMEDNYLVTAIPVKIL
HHHHHCCEEEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEEEEEEE
INKRGEIIRRWKGGGDENKMQLKKILEETFDRD
ECCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA