Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
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Accession | NC_009441 |
Length | 6,096,872 |
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The map label for this gene is resA [H]
Identifier: 146301532
GI number: 146301532
Start: 4496368
End: 4497549
Strand: Reverse
Name: resA [H]
Synonym: Fjoh_3793
Alternate gene names: 146301532
Gene position: 4497549-4496368 (Counterclockwise)
Preceding gene: 146301538
Following gene: 146301528
Centisome position: 73.77
GC content: 34.94
Gene sequence:
>1182_bases ATGTTCAAACCGGCTCTTCTTCTTTTTTTAGTTTCCATTTCTCTATCTGCCCAGAAATTAGGCAATAGAACCGCATTCGA ACTAAGGGGTGCAGGTAAAGGATTAAGTATTGATAAGATCTACCTGGTTTACGAAGTTGGCGACAAAAGAATTTATGACT CAGTTAAAATAGATAATAGCAAATTTATTTTGAAAGGAAATATCGATTATCCCATTAGAGCCACTTTATGCAATAATCGA GAGTTTAGTATGAGCAAAAGTAATTCTATAGAATTGTTCCTTGAACCAGCGATAATGGAAATTAAGTTAGATTTTTATGA TTTTTCAACAGCAGAGATGAAGGGCAGTAAAACACAAGACGAATATTCCCAGCTTCAAAAAGTAAAAAATGTCGTATTTA GTAAAAGAGATTCTATCTCATTGCTTATAAGATCGTATTTTGACAGGATCACTGCCGCCTCAGACCCGCAGATTAAATTG GAACTGGAACATCAATTGGAAATTTTGGAAAAGCTGTCAGATGAAAATAAAATCGCAGAAATGGAGATAGATTTTAATTT TATCAGACAGAATCCATCTTCGTTTACAGCGCCCTCTTTACTTTATTACAGATTGGCTAAGAAAGAAGGGCTTTTACATT CTGAAACTATTATATCTCTTGCTGATGGGTTGTCAAAAGAAGTAAAAGAATCTCCGTTGGGAGTAAGGCTTTTTAAAAGG ATTTCTGATTTTAAGAACAGTAAAGTGGGAAGCATTGCTCCTGATTTCATATTAAAGGATTACAATGGACAGATAGTGTC TTTGGGTTCCTTTCGGGAAAAAAAATATGTTCTGATAGATTTCTGGGCAAGTTGGTGCGGGCCTTGCAGGCAAGACCTGC CTTTTCTTAAAGATGCCTATGAGAAATATAAAGATATGGGATTTGAAATTATCAGCATATCGAGAGACAATAATCTGAAT TCATGGAGAAAAGCAATAGTCGATGAAAAAATAGGATTTTGGAAGCATATATCCGTTGCCGAAAATCAGACAAAAATGGA AGATAATTACCTTGTTACGGCAATTCCTGTCAAGATTCTGATTAACAAACGGGGCGAAATAATTCGACGATGGAAAGGTG GTGGAGATGAAAACAAAATGCAATTAAAAAAAATACTTGAAGAAACTTTTGACAGAGATTAG
Upstream 100 bases:
>100_bases GTTCCTTTGACATTAAAATTTAGAGATGCCAATGCAGTATTTTTAAAAAAAACTGCTTTTTGACTGTTCTGAAATCAACT GTTTAGAAAATACAAAAAAA
Downstream 100 bases:
>100_bases ATTCTATAAAACATTTAGATAACCCCCTTAATATACGACCGAAAACTTTGCGTATCTTTTTCAGTATTTAGAAAAAGAAG AATTGCCAATTGATAAATGA
Product: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 393; Mature: 393
Protein sequence:
>393_residues MFKPALLLFLVSISLSAQKLGNRTAFELRGAGKGLSIDKIYLVYEVGDKRIYDSVKIDNSKFILKGNIDYPIRATLCNNR EFSMSKSNSIELFLEPAIMEIKLDFYDFSTAEMKGSKTQDEYSQLQKVKNVVFSKRDSISLLIRSYFDRITAASDPQIKL ELEHQLEILEKLSDENKIAEMEIDFNFIRQNPSSFTAPSLLYYRLAKKEGLLHSETIISLADGLSKEVKESPLGVRLFKR ISDFKNSKVGSIAPDFILKDYNGQIVSLGSFREKKYVLIDFWASWCGPCRQDLPFLKDAYEKYKDMGFEIISISRDNNLN SWRKAIVDEKIGFWKHISVAENQTKMEDNYLVTAIPVKILINKRGEIIRRWKGGGDENKMQLKKILEETFDRD
Sequences:
>Translated_393_residues MFKPALLLFLVSISLSAQKLGNRTAFELRGAGKGLSIDKIYLVYEVGDKRIYDSVKIDNSKFILKGNIDYPIRATLCNNR EFSMSKSNSIELFLEPAIMEIKLDFYDFSTAEMKGSKTQDEYSQLQKVKNVVFSKRDSISLLIRSYFDRITAASDPQIKL ELEHQLEILEKLSDENKIAEMEIDFNFIRQNPSSFTAPSLLYYRLAKKEGLLHSETIISLADGLSKEVKESPLGVRLFKR ISDFKNSKVGSIAPDFILKDYNGQIVSLGSFREKKYVLIDFWASWCGPCRQDLPFLKDAYEKYKDMGFEIISISRDNNLN SWRKAIVDEKIGFWKHISVAENQTKMEDNYLVTAIPVKILINKRGEIIRRWKGGGDENKMQLKKILEETFDRD >Mature_393_residues MFKPALLLFLVSISLSAQKLGNRTAFELRGAGKGLSIDKIYLVYEVGDKRIYDSVKIDNSKFILKGNIDYPIRATLCNNR EFSMSKSNSIELFLEPAIMEIKLDFYDFSTAEMKGSKTQDEYSQLQKVKNVVFSKRDSISLLIRSYFDRITAASDPQIKL ELEHQLEILEKLSDENKIAEMEIDFNFIRQNPSSFTAPSLLYYRLAKKEGLLHSETIISLADGLSKEVKESPLGVRLFKR ISDFKNSKVGSIAPDFILKDYNGQIVSLGSFREKKYVLIDFWASWCGPCRQDLPFLKDAYEKYKDMGFEIISISRDNNLN SWRKAIVDEKIGFWKHISVAENQTKMEDNYLVTAIPVKILINKRGEIIRRWKGGGDENKMQLKKILEETFDRD
Specific function: Thiol-disulfide oxidoreductase which is required in disulfide reduction during c-type cytochrome synthesis. May accept reducing equivalents from CcdA, leading to breakage of disulfide bonds in apocytochrome c; following this reduction heme can be covalent
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cell membrane; Single-pass type II membrane protein. Note=The thioredoxin-like motif is exposed on the outside of the membrane (By similarity) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: NA
Molecular weight: Translated: 45282; Mature: 45282
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKPALLLFLVSISLSAQKLGNRTAFELRGAGKGLSIDKIYLVYEVGDKRIYDSVKIDNS CCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEEEEECCCEEECCEEECCC KFILKGNIDYPIRATLCNNREFSMSKSNSIELFLEPAIMEIKLDFYDFSTAEMKGSKTQD EEEEECCCCCCEEEEEECCCCCCCCCCCCEEEEEECEEEEEEEEEEECCHHHCCCCCCHH EYSQLQKVKNVVFSKRDSISLLIRSYFDRITAASDPQIKLELEHQLEILEKLSDENKIAE HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHCCCCCEEE MEIDFNFIRQNPSSFTAPSLLYYRLAKKEGLLHSETIISLADGLSKEVKESPLGVRLFKR EEEEEHEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH ISDFKNSKVGSIAPDFILKDYNGQIVSLGSFREKKYVLIDFWASWCGPCRQDLPFLKDAY HHHHCCCCCCCCCCCCEEECCCCCEEEECCCCCCCEEEEEEHHHHCCCHHHCCHHHHHHH EKYKDMGFEIISISRDNNLNSWRKAIVDEKIGFWKHISVAENQTKMEDNYLVTAIPVKIL HHHHHCCEEEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEEEEEEE INKRGEIIRRWKGGGDENKMQLKKILEETFDRD ECCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MFKPALLLFLVSISLSAQKLGNRTAFELRGAGKGLSIDKIYLVYEVGDKRIYDSVKIDNS CCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEEEEECCCEEECCEEECCC KFILKGNIDYPIRATLCNNREFSMSKSNSIELFLEPAIMEIKLDFYDFSTAEMKGSKTQD EEEEECCCCCCEEEEEECCCCCCCCCCCCEEEEEECEEEEEEEEEEECCHHHCCCCCCHH EYSQLQKVKNVVFSKRDSISLLIRSYFDRITAASDPQIKLELEHQLEILEKLSDENKIAE HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHCCCCCEEE MEIDFNFIRQNPSSFTAPSLLYYRLAKKEGLLHSETIISLADGLSKEVKESPLGVRLFKR EEEEEHEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH ISDFKNSKVGSIAPDFILKDYNGQIVSLGSFREKKYVLIDFWASWCGPCRQDLPFLKDAY HHHHCCCCCCCCCCCCEEECCCCCEEEECCCCCCCEEEEEEHHHHCCCHHHCCHHHHHHH EKYKDMGFEIISISRDNNLNSWRKAIVDEKIGFWKHISVAENQTKMEDNYLVTAIPVKIL HHHHHCCEEEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEEEEEEE INKRGEIIRRWKGGGDENKMQLKKILEETFDRD ECCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA