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The map label for this gene is (hspc4-1 [H]

Identifier: 146301492

GI number: 146301492

Start: 4448878

End: 4449330

Strand: Reverse

Name: (hspc4-1 [H]

Synonym: Fjoh_3751

Alternate gene names: 146301492

Gene position: 4449330-4448878 (Counterclockwise)

Preceding gene: 146301493

Following gene: 146301488

Centisome position: 72.98

GC content: 44.59

Gene sequence:

>453_bases
ATGAATCTTATCAAAAGAAATGCAAACCAGCATCGTGCTTTGCCGCATACGTTCTTTGATGACGTTTTTGGCCGCGAGCT
TTTCAATTGGGAAAACAAAAATTTTTCTACAACTAGTACCACCCTGCCATCGGTAAACATCAAAGAGACTGCAGAACATT
ATGAAGTCGAAGTGGCCGCCCCCGGCCTGGAGAAAGACGATTTCAAAGTGACCCTTGACGGAAACCTGCTGACTATTTCT
TCGGAAAAAGAAAATAAGCAGACCATCGAGCAGGAGAATTTTACCCGCAGGGAATTCAGCTACCAGTCTTTCCAGAGAAG
CTTTGAGCTGCCTAAAAATGTGGTCGACGAAGAAAACATCACTGCACGTTATGTGAATGGCCTGCTTCATCTGTCCATAC
CCAAAAAAGAGGAAGCCAAGCAGAAGCCGCCTAGAATGATTGAAATTGCCTGA

Upstream 100 bases:

>100_bases
CATTTTTTTTCTCTGGCATAATTTTGGTTTTTTTTGTGACTGGCACTGCAAAAGCAGTGTATGTTCAAAAATATTGTATA
ACAATTAAAAGTAAAATGTT

Downstream 100 bases:

>100_bases
TTTCTAATCGATTATTTTAACCTTTTTTATTTTAAAGCTGTTCTCCGGGACAGCTTTAATTATTACAAAAAGCTATAGCC
ATCTTCTCTGCCCTGGCCGT

Product: response regulator receiver protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MNLIKRNANQHRALPHTFFDDVFGRELFNWENKNFSTTSTTLPSVNIKETAEHYEVEVAAPGLEKDDFKVTLDGNLLTIS
SEKENKQTIEQENFTRREFSYQSFQRSFELPKNVVDEENITARYVNGLLHLSIPKKEEAKQKPPRMIEIA

Sequences:

>Translated_150_residues
MNLIKRNANQHRALPHTFFDDVFGRELFNWENKNFSTTSTTLPSVNIKETAEHYEVEVAAPGLEKDDFKVTLDGNLLTIS
SEKENKQTIEQENFTRREFSYQSFQRSFELPKNVVDEENITARYVNGLLHLSIPKKEEAKQKPPRMIEIA
>Mature_150_residues
MNLIKRNANQHRALPHTFFDDVFGRELFNWENKNFSTTSTTLPSVNIKETAEHYEVEVAAPGLEKDDFKVTLDGNLLTIS
SEKENKQTIEQENFTRREFSYQSFQRSFELPKNVVDEENITARYVNGLLHLSIPKKEEAKQKPPRMIEIA

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 17460; Mature: 17460

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLIKRNANQHRALPHTFFDDVFGRELFNWENKNFSTTSTTLPSVNIKETAEHYEVEVAA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCHHHEEEEEEC
PGLEKDDFKVTLDGNLLTISSEKENKQTIEQENFTRREFSYQSFQRSFELPKNVVDEENI
CCCCCCCEEEEECCCEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHCCCCCC
TARYVNGLLHLSIPKKEEAKQKPPRMIEIA
HHHHHCCEEEEECCCHHHHHCCCCCEEEEC
>Mature Secondary Structure
MNLIKRNANQHRALPHTFFDDVFGRELFNWENKNFSTTSTTLPSVNIKETAEHYEVEVAA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCHHHEEEEEEC
PGLEKDDFKVTLDGNLLTISSEKENKQTIEQENFTRREFSYQSFQRSFELPKNVVDEENI
CCCCCCCEEEEECCCEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHCCCCCC
TARYVNGLLHLSIPKKEEAKQKPPRMIEIA
HHHHHCCEEEEECCCHHHHHCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA