Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
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Accession | NC_009441 |
Length | 6,096,872 |
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The map label for this gene is hemA2
Identifier: 146301493
GI number: 146301493
Start: 4450052
End: 4451356
Strand: Reverse
Name: hemA2
Synonym: Fjoh_3752
Alternate gene names: 146301493
Gene position: 4451356-4450052 (Counterclockwise)
Preceding gene: 146301494
Following gene: 146301492
Centisome position: 73.01
GC content: 36.17
Gene sequence:
>1305_bases ATGGAAAATTTTAATATGCCCAGATCTACGACTTTTTACGCATTAGGATTAAGTTACAAGAAAGCAGATGCAGTTATAAG AGGAAAATTTAGTTTAGATGCCCAGGCACAATCTGATTTATTGCTGCAGGCTAAGGCAGAAGGCATAGAATCATTGGTTG TTACCTCTACCTGCAATAGAACTGAAATTTATGGTTTTGCCCATCATCCTTATGAACTTATCAAACTGCTTTGCGAAAAC AGCAATGGCTCCATAGAAGAATTTCAGCAGGCTGCTTATATATATAAGAATGAAGAAGCTGTCAGCCATATGTTCCGGGT AGGAACAGGTTTGGACAGTCAGATTTTGGGTGATTTTGAAATCATCAGCCAGATTAAAACCGCTTTTAACAATAGTAAAC AGGAAGGCTTGGTCAATACATTTCTGGACCGGTTGGTAAATACAGTTATTCAAGCCAGCAAAAAAGTTAAAACTGAGACG AAAATTTCTTCCGGGGCAACGTCAGTTTCTTTTGCATCAGTGCAGTATATAATCCGAAATGTGGCAGATATTGGAAGCAA AAATATTTTGTTATTCGGAACAGGGAAAATAGGAAGAAATACGTGCGAAAACTTAGTAAAACATACTAAAAACAGTCATA TTACTCTTATAAACAGAACAAAAAACAAAGCCGAATTATTGGCTGGCAAGCTGAATGTTATTGTAAAAGATTATGCTGAT TTAAAACAAGAACTGCACCAAGCCGATGTGCTGGTTGTAGCTACAGGAGCACAAAATCCGACTATTGACAAAGCATCGCT TGCTTTACAGAAACCCTTATTGATTCTGGATTTATCCATCCCGCGCAATGTAGATGCCAATGTAGAAGAAATACCCGGTG TAACTTTAATACATCTGGATGCATTATCTCAAATTACGGATGACACGCTGGAAAGAAGAAAACAGCATATACCTGCTGCA GAAGCCATTATTGATGATATGAAATTAGAACTGAATACCTGGGTAAACGGCCGAAAATGTGCTCCGACTATTCATGCATT AAAATCCAAGCTAAATGATATTGTATCTGCCGAATTTGCTTTTCAAAAAAAGAAAATAACCCATTTTGATGATGCTCAGA TGGATTTAATAAGTTCCAGAATTATTCAAAAATTGACAAACCATTTTGCCAGCCATTTAAAAAATGAAAACACTTCAGTG GATCAAAGTATTGAATTTATTGAAAAAATATTTCAGATCGGACAGCTTGCACCCAATAAGACTTCTTCACCAATAGCTGA TAAATACAAAATCAATCTCTCATAA
Upstream 100 bases:
>100_bases GTTTAAATCCATTTATCCCATAGTGATCAAAAAGCACTTCCGGCGCTGTTATATAAATCTGCAGTTACTAATTTTTGAAC TTTTTAAGGAAACCATAAAT
Downstream 100 bases:
>100_bases ATACATAATTTACTATTAAATCGGAATAGTAAGTCCAGATATGATGAATTACGTTTTTTGAGTGGGCACAAAATAAAAAA TGAATTTCGGAATATGGAAA
Product: glutamyl-tRNA reductase
Products: NA
Alternate protein names: GluTR 2
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues MENFNMPRSTTFYALGLSYKKADAVIRGKFSLDAQAQSDLLLQAKAEGIESLVVTSTCNRTEIYGFAHHPYELIKLLCEN SNGSIEEFQQAAYIYKNEEAVSHMFRVGTGLDSQILGDFEIISQIKTAFNNSKQEGLVNTFLDRLVNTVIQASKKVKTET KISSGATSVSFASVQYIIRNVADIGSKNILLFGTGKIGRNTCENLVKHTKNSHITLINRTKNKAELLAGKLNVIVKDYAD LKQELHQADVLVVATGAQNPTIDKASLALQKPLLILDLSIPRNVDANVEEIPGVTLIHLDALSQITDDTLERRKQHIPAA EAIIDDMKLELNTWVNGRKCAPTIHALKSKLNDIVSAEFAFQKKKITHFDDAQMDLISSRIIQKLTNHFASHLKNENTSV DQSIEFIEKIFQIGQLAPNKTSSPIADKYKINLS
Sequences:
>Translated_434_residues MENFNMPRSTTFYALGLSYKKADAVIRGKFSLDAQAQSDLLLQAKAEGIESLVVTSTCNRTEIYGFAHHPYELIKLLCEN SNGSIEEFQQAAYIYKNEEAVSHMFRVGTGLDSQILGDFEIISQIKTAFNNSKQEGLVNTFLDRLVNTVIQASKKVKTET KISSGATSVSFASVQYIIRNVADIGSKNILLFGTGKIGRNTCENLVKHTKNSHITLINRTKNKAELLAGKLNVIVKDYAD LKQELHQADVLVVATGAQNPTIDKASLALQKPLLILDLSIPRNVDANVEEIPGVTLIHLDALSQITDDTLERRKQHIPAA EAIIDDMKLELNTWVNGRKCAPTIHALKSKLNDIVSAEFAFQKKKITHFDDAQMDLISSRIIQKLTNHFASHLKNENTSV DQSIEFIEKIFQIGQLAPNKTSSPIADKYKINLS >Mature_434_residues MENFNMPRSTTFYALGLSYKKADAVIRGKFSLDAQAQSDLLLQAKAEGIESLVVTSTCNRTEIYGFAHHPYELIKLLCEN SNGSIEEFQQAAYIYKNEEAVSHMFRVGTGLDSQILGDFEIISQIKTAFNNSKQEGLVNTFLDRLVNTVIQASKKVKTET KISSGATSVSFASVQYIIRNVADIGSKNILLFGTGKIGRNTCENLVKHTKNSHITLINRTKNKAELLAGKLNVIVKDYAD LKQELHQADVLVVATGAQNPTIDKASLALQKPLLILDLSIPRNVDANVEEIPGVTLIHLDALSQITDDTLERRKQHIPAA EAIIDDMKLELNTWVNGRKCAPTIHALKSKLNDIVSAEFAFQKKKITHFDDAQMDLISSRIIQKLTNHFASHLKNENTSV DQSIEFIEKIFQIGQLAPNKTSSPIADKYKINLS
Specific function: Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
COG id: COG0373
COG function: function code H; Glutamyl-tRNA reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamyl-tRNA reductase family
Homologues:
Organism=Escherichia coli, GI1787461, Length=393, Percent_Identity=29.7709923664122, Blast_Score=159, Evalue=2e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HEM12_FLAJ1 (A5FDF9)
Other databases:
- EMBL: CP000685 - RefSeq: YP_001196084.1 - ProteinModelPortal: A5FDF9 - SMR: A5FDF9 - STRING: A5FDF9 - GeneID: 5089786 - GenomeReviews: CP000685_GR - KEGG: fjo:Fjoh_3752 - eggNOG: COG0373 - HOGENOM: HBG479062 - OMA: EVRPEHF - ProtClustDB: CLSK851822 - BioCyc: FJOH376686:FJOH_3752-MONOMER - GO: GO:0005737 - HAMAP: MF_00087 - InterPro: IPR000343 - InterPro: IPR015896 - InterPro: IPR015895 - InterPro: IPR016040 - InterPro: IPR018214 - InterPro: IPR006151 - Gene3D: G3DSA:3.40.50.720 - PIRSF: PIRSF000445 - TIGRFAMs: TIGR01035
Pfam domain/function: PF00745 GlutR_dimer; PF05201 GlutR_N; PF01488 Shikimate_DH; SSF69075 4pyrrol_synth_GluRdtase_C; SSF69742 GlutR
EC number: =1.2.1.70
Molecular weight: Translated: 48168; Mature: 48168
Theoretical pI: Translated: 8.03; Mature: 8.03
Prosite motif: PS00747 GLUTR
Important sites: ACT_SITE 58-58 BINDING 113-113 BINDING 124-124
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENFNMPRSTTFYALGLSYKKADAVIRGKFSLDAQAQSDLLLQAKAEGIESLVVTSTCNR CCCCCCCCCCEEEEEECCHHHHCCEEEECCCCCCCCCHHHHHHHHHHCHHEEEEECCCCC TEIYGFAHHPYELIKLLCENSNGSIEEFQQAAYIYKNEEAVSHMFRVGTGLDSQILGDFE CEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHH IISQIKTAFNNSKQEGLVNTFLDRLVNTVIQASKKVKTETKISSGATSVSFASVQYIIRN HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH VADIGSKNILLFGTGKIGRNTCENLVKHTKNSHITLINRTKNKAELLAGKLNVIVKDYAD HHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH LKQELHQADVLVVATGAQNPTIDKASLALQKPLLILDLSIPRNVDANVEEIPGVTLIHLD HHHHHHHCCEEEEEECCCCCCCCHHHHHHHCCEEEEEECCCCCCCCCHHHCCCEEEEEHH ALSQITDDTLERRKQHIPAAEAIIDDMKLELNTWVNGRKCAPTIHALKSKLNDIVSAEFA HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH FQKKKITHFDDAQMDLISSRIIQKLTNHFASHLKNENTSVDQSIEFIEKIFQIGQLAPNK HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCC TSSPIADKYKINLS CCCCCCCCEEEECC >Mature Secondary Structure MENFNMPRSTTFYALGLSYKKADAVIRGKFSLDAQAQSDLLLQAKAEGIESLVVTSTCNR CCCCCCCCCCEEEEEECCHHHHCCEEEECCCCCCCCCHHHHHHHHHHCHHEEEEECCCCC TEIYGFAHHPYELIKLLCENSNGSIEEFQQAAYIYKNEEAVSHMFRVGTGLDSQILGDFE CEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHH IISQIKTAFNNSKQEGLVNTFLDRLVNTVIQASKKVKTETKISSGATSVSFASVQYIIRN HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH VADIGSKNILLFGTGKIGRNTCENLVKHTKNSHITLINRTKNKAELLAGKLNVIVKDYAD HHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH LKQELHQADVLVVATGAQNPTIDKASLALQKPLLILDLSIPRNVDANVEEIPGVTLIHLD HHHHHHHCCEEEEEECCCCCCCCHHHHHHHCCEEEEEECCCCCCCCCHHHCCCEEEEEHH ALSQITDDTLERRKQHIPAAEAIIDDMKLELNTWVNGRKCAPTIHALKSKLNDIVSAEFA HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH FQKKKITHFDDAQMDLISSRIIQKLTNHFASHLKNENTSVDQSIEFIEKIFQIGQLAPNK HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCC TSSPIADKYKINLS CCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA