| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is phoA [H]
Identifier: 146300932
GI number: 146300932
Start: 3797579
End: 3798985
Strand: Direct
Name: phoA [H]
Synonym: Fjoh_3187
Alternate gene names: 146300932
Gene position: 3797579-3798985 (Clockwise)
Preceding gene: 146300931
Following gene: 146300933
Centisome position: 62.29
GC content: 36.39
Gene sequence:
>1407_bases ATGAACAGACGCAGATTTCTTAAAGGCTCAACTTTATTAAGCGGATTGGCGGTTATGAGCCCAACGGTTATCTTTTCAAA TGATTTGGAATCCATTTCAAAGAAAAATAAAAAAGCCAAAAATATTATATTTCTAATCAGTGACGGAATGAGCACTGGAA CTCTGCAAATGGCGAATTTATATTCGCAGAATATTTTAAATAAAAATGGAAACTGGATGAATCTTTATGCAGAAAATAAA GTTTCCAGAGCCTTAATGGATACAGCTTCTGCAAGCTCGGCAGTAACTGATTCTGCTGCGGCAAGTTCTTCTTTTGGAGG CGGATATCGTGTTAGAAATGGTGTTTTAAATGTTGGACCAAATGGCGAAAAATACCTTCCAATCTGGCAGAAATTCAAAA ATGCAGGGAAAAAAGCCGGCTGTGTTACCACAGTTACTATTACACATGCAACTCCGGCGGGATTCTGCGTGAACTCTGAC AGCAGAAATGCTGAAAACGAAATTGCAGAAATGTATGCTGGTTTAGGATTAGACGTTCTGATGGGCGGCGGAGATGAATT TTTTAATCCTGATAAAAGATCAGATAAAAAAGATATTTATAAAATCTATCAGGAAAAAGGGTATAAAGTAGTAAAAGATA AAACTGAACTGGGAAATTTGAAAAAAGGCGCAAAAACTCTTGGAGTATTTTCTACAGGCGCATTGCCCTATTCTATTGAC AGAACCAATATTCCGGAATTACAGCATACACCAACGCTTGCCGAAATGAGCAAAGCTGCTATTGACCAAATGAAAGATCA CAAAGATGGTTTTGTTTTACTTATAGAAGGCGGAAAAGTAGACTGGGCAGCACATGCAAATGATATTGCAGCACTAATAC ACGATCAGCTGGCATTTGATGAAGCTGTAAAAACGGCCATTGATTTTGCTGAAAAAGATACAGAAACGCTTGTTATTATA ACTACTGACCACGGTAATGCCAATCCGGGGCTTATTTATGGCACAGATGCAACAAAAAAATTCAACAGCATTGCCGATTA TAAATACACTAATGAATACATTTTGAATGCTATTCACAGTAATTTTAATTTACAGCAGATAAAAGACTGGATTTACCAGA CCAACAAAATAAGCTTAAGCGATCAGGAAGCACAGCATTTACTTGATTTTTATTCTGGTTTGGAAAAAATGGAAGACGGA TTGTACAATTACAAAAAACTACCTTTTAAAGCTTACTCAGAAATACAAAAAAAGCATAATAACATTGGATGGATCAGTAT GGATCATTCTGGTGATTATGTAGAGTTAGCTGCTTTTGGTCCCGGAAGTGAACTTTTAAAACCTTTCGTAAAAAACACCG ATATGCATTATTTAATGCTCGAAGCCGCAATGCAGGATAAATTATAA
Upstream 100 bases:
>100_bases ATAAAATCATTCTAATAAAAAAATGACAATTAATTAACGCAACTATGTTTCATTAATTCCAAATTAAAAACTAAATTGCT GAAAATTTAAATGAAGCAAA
Downstream 100 bases:
>100_bases AATATTAATTTCGAGATATAAAAACAAACAGCCGGACAAGTTTTACGGCTGTTTTTTTGTTTATGAAAAACACAAAAGAT CTTTTTTTGTTTAATAACCT
Product: alkaline phosphatase
Products: NA
Alternate protein names: Alkaline phosphatase IV; APase IV [H]
Number of amino acids: Translated: 468; Mature: 468
Protein sequence:
>468_residues MNRRRFLKGSTLLSGLAVMSPTVIFSNDLESISKKNKKAKNIIFLISDGMSTGTLQMANLYSQNILNKNGNWMNLYAENK VSRALMDTASASSAVTDSAAASSSFGGGYRVRNGVLNVGPNGEKYLPIWQKFKNAGKKAGCVTTVTITHATPAGFCVNSD SRNAENEIAEMYAGLGLDVLMGGGDEFFNPDKRSDKKDIYKIYQEKGYKVVKDKTELGNLKKGAKTLGVFSTGALPYSID RTNIPELQHTPTLAEMSKAAIDQMKDHKDGFVLLIEGGKVDWAAHANDIAALIHDQLAFDEAVKTAIDFAEKDTETLVII TTDHGNANPGLIYGTDATKKFNSIADYKYTNEYILNAIHSNFNLQQIKDWIYQTNKISLSDQEAQHLLDFYSGLEKMEDG LYNYKKLPFKAYSEIQKKHNNIGWISMDHSGDYVELAAFGPGSELLKPFVKNTDMHYLMLEAAMQDKL
Sequences:
>Translated_468_residues MNRRRFLKGSTLLSGLAVMSPTVIFSNDLESISKKNKKAKNIIFLISDGMSTGTLQMANLYSQNILNKNGNWMNLYAENK VSRALMDTASASSAVTDSAAASSSFGGGYRVRNGVLNVGPNGEKYLPIWQKFKNAGKKAGCVTTVTITHATPAGFCVNSD SRNAENEIAEMYAGLGLDVLMGGGDEFFNPDKRSDKKDIYKIYQEKGYKVVKDKTELGNLKKGAKTLGVFSTGALPYSID RTNIPELQHTPTLAEMSKAAIDQMKDHKDGFVLLIEGGKVDWAAHANDIAALIHDQLAFDEAVKTAIDFAEKDTETLVII TTDHGNANPGLIYGTDATKKFNSIADYKYTNEYILNAIHSNFNLQQIKDWIYQTNKISLSDQEAQHLLDFYSGLEKMEDG LYNYKKLPFKAYSEIQKKHNNIGWISMDHSGDYVELAAFGPGSELLKPFVKNTDMHYLMLEAAMQDKL >Mature_468_residues MNRRRFLKGSTLLSGLAVMSPTVIFSNDLESISKKNKKAKNIIFLISDGMSTGTLQMANLYSQNILNKNGNWMNLYAENK VSRALMDTASASSAVTDSAAASSSFGGGYRVRNGVLNVGPNGEKYLPIWQKFKNAGKKAGCVTTVTITHATPAGFCVNSD SRNAENEIAEMYAGLGLDVLMGGGDEFFNPDKRSDKKDIYKIYQEKGYKVVKDKTELGNLKKGAKTLGVFSTGALPYSID RTNIPELQHTPTLAEMSKAAIDQMKDHKDGFVLLIEGGKVDWAAHANDIAALIHDQLAFDEAVKTAIDFAEKDTETLVII TTDHGNANPGLIYGTDATKKFNSIADYKYTNEYILNAIHSNFNLQQIKDWIYQTNKISLSDQEAQHLLDFYSGLEKMEDG LYNYKKLPFKAYSEIQKKHNNIGWISMDHSGDYVELAAFGPGSELLKPFVKNTDMHYLMLEAAMQDKL
Specific function: Unknown
COG id: COG1785
COG function: function code P; Alkaline phosphatase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alkaline phosphatase family [H]
Homologues:
Organism=Homo sapiens, GI116734717, Length=335, Percent_Identity=25.9701492537313, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI294660770, Length=330, Percent_Identity=25.1515151515152, Blast_Score=101, Evalue=1e-21, Organism=Homo sapiens, GI94721246, Length=335, Percent_Identity=25.0746268656716, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI157266296, Length=340, Percent_Identity=25, Blast_Score=100, Evalue=6e-21, Organism=Homo sapiens, GI157266292, Length=334, Percent_Identity=25.1497005988024, Blast_Score=96, Evalue=7e-20, Organism=Homo sapiens, GI294660772, Length=286, Percent_Identity=25.8741258741259, Blast_Score=93, Evalue=4e-19, Organism=Escherichia coli, GI48994877, Length=410, Percent_Identity=27.5609756097561, Blast_Score=121, Evalue=1e-28, Organism=Saccharomyces cerevisiae, GI6320689, Length=482, Percent_Identity=28.8381742738589, Blast_Score=152, Evalue=1e-37, Organism=Drosophila melanogaster, GI18859923, Length=323, Percent_Identity=30.3405572755418, Blast_Score=127, Evalue=1e-29, Organism=Drosophila melanogaster, GI19921912, Length=352, Percent_Identity=27.8409090909091, Blast_Score=122, Evalue=4e-28, Organism=Drosophila melanogaster, GI21355151, Length=335, Percent_Identity=27.7611940298507, Blast_Score=115, Evalue=9e-26, Organism=Drosophila melanogaster, GI21355149, Length=347, Percent_Identity=26.5129682997118, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI21358067, Length=478, Percent_Identity=25.1046025104602, Blast_Score=105, Evalue=7e-23, Organism=Drosophila melanogaster, GI21355981, Length=340, Percent_Identity=28.2352941176471, Blast_Score=104, Evalue=1e-22, Organism=Drosophila melanogaster, GI24651554, Length=479, Percent_Identity=24.6346555323591, Blast_Score=101, Evalue=1e-21, Organism=Drosophila melanogaster, GI85725200, Length=347, Percent_Identity=26.8011527377522, Blast_Score=99, Evalue=9e-21, Organism=Drosophila melanogaster, GI85815833, Length=347, Percent_Identity=26.8011527377522, Blast_Score=99, Evalue=9e-21, Organism=Drosophila melanogaster, GI24657835, Length=364, Percent_Identity=25.2747252747253, Blast_Score=98, Evalue=1e-20, Organism=Drosophila melanogaster, GI24657842, Length=506, Percent_Identity=23.7154150197628, Blast_Score=97, Evalue=3e-20, Organism=Drosophila melanogaster, GI24657827, Length=356, Percent_Identity=26.123595505618, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI24585213, Length=346, Percent_Identity=25.4335260115607, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI24651556, Length=466, Percent_Identity=23.3905579399142, Blast_Score=83, Evalue=5e-16,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR001952 - InterPro: IPR018299 - InterPro: IPR017850 [H]
Pfam domain/function: PF00245 Alk_phosphatase [H]
EC number: =3.1.3.1 [H]
Molecular weight: Translated: 51767; Mature: 51767
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRRRFLKGSTLLSGLAVMSPTVIFSNDLESISKKNKKAKNIIFLISDGMSTGTLQMANL CCCCCCCCCHHHHHHHHHHCCEEEECCCHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHH YSQNILNKNGNWMNLYAENKVSRALMDTASASSAVTDSAAASSSFGGGYRVRNGVLNVGP HHHHHHCCCCCEEEEEECCHHHHHHHHHCCCCHHHCCHHHCCCCCCCCEEEECCEEEECC NGEKYLPIWQKFKNAGKKAGCVTTVTITHATPAGFCVNSDSRNAENEIAEMYAGLGLDVL CCCEECHHHHHHHHCCCCCCCEEEEEEEECCCCCEEECCCCCCHHHHHHHHHHCCCEEEE MGGGDEFFNPDKRSDKKDIYKIYQEKGYKVVKDKTELGNLKKGAKTLGVFSTGALPYSID ECCCHHHCCCCCCCCHHHHHHHHHHCCCEEEECCHHHCCHHHCHHHHCEEECCCCCEECC RTNIPELQHTPTLAEMSKAAIDQMKDHKDGFVLLIEGGKVDWAAHANDIAALIHDQLAFD CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCEEEHHCHHHHHHHHHHHHHHH EAVKTAIDFAEKDTETLVIITTDHGNANPGLIYGTDATKKFNSIADYKYTNEYILNAIHS HHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEECCCCHHHHHHHHCCCCHHHHHHHHHHC NFNLQQIKDWIYQTNKISLSDQEAQHLLDFYSGLEKMEDGLYNYKKLPFKAYSEIQKKHN CCCHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC NIGWISMDHSGDYVELAAFGPGSELLKPFVKNTDMHYLMLEAAMQDKL CCCEEEECCCCCEEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MNRRRFLKGSTLLSGLAVMSPTVIFSNDLESISKKNKKAKNIIFLISDGMSTGTLQMANL CCCCCCCCCHHHHHHHHHHCCEEEECCCHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHH YSQNILNKNGNWMNLYAENKVSRALMDTASASSAVTDSAAASSSFGGGYRVRNGVLNVGP HHHHHHCCCCCEEEEEECCHHHHHHHHHCCCCHHHCCHHHCCCCCCCCEEEECCEEEECC NGEKYLPIWQKFKNAGKKAGCVTTVTITHATPAGFCVNSDSRNAENEIAEMYAGLGLDVL CCCEECHHHHHHHHCCCCCCCEEEEEEEECCCCCEEECCCCCCHHHHHHHHHHCCCEEEE MGGGDEFFNPDKRSDKKDIYKIYQEKGYKVVKDKTELGNLKKGAKTLGVFSTGALPYSID ECCCHHHCCCCCCCCHHHHHHHHHHCCCEEEECCHHHCCHHHCHHHHCEEECCCCCEECC RTNIPELQHTPTLAEMSKAAIDQMKDHKDGFVLLIEGGKVDWAAHANDIAALIHDQLAFD CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCEEEHHCHHHHHHHHHHHHHHH EAVKTAIDFAEKDTETLVIITTDHGNANPGLIYGTDATKKFNSIADYKYTNEYILNAIHS HHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEECCCCHHHHHHHHCCCCHHHHHHHHHHC NFNLQQIKDWIYQTNKISLSDQEAQHLLDFYSGLEKMEDGLYNYKKLPFKAYSEIQKKHN CCCHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC NIGWISMDHSGDYVELAAFGPGSELLKPFVKNTDMHYLMLEAAMQDKL CCCEEEECCCCCEEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8113174; 9579061; 9384377; 1898729; 2125017; 2105301; 8144469 [H]