Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146300910

Identifier: 146300910

GI number: 146300910

Start: 3764288

End: 3765505

Strand: Direct

Name: 146300910

Synonym: Fjoh_3165

Alternate gene names: NA

Gene position: 3764288-3765505 (Clockwise)

Preceding gene: 146300909

Following gene: 146300911

Centisome position: 61.74

GC content: 37.11

Gene sequence:

>1218_bases
ATGAGAGAATTTGAACAAAAAAAAGCAGTTAATCACTCTCCTTCTACTTTTTTTGGGCCAAAAGTTCAAAAAAAACTGAC
TACAGGCACTGTTGGAGACAAATACGAAACAGAAGCTGATAGTGTTGCAGACAAAGTAGTTAACAAACGTAATACAGGAG
GTTTACTGCAATCTAAAAGTGAAAACACTGTACAGCAAAAACCTATTTCAGAAACTATTTCAACGGTTCAAAAACAAGAT
TTAGCACAAGAAAAGCCTTTACAAAAAAAGGGCAAAGAAAAAGAAGAAGATAAAAAAGTGCAAAAGAAATCCGATAAGGA
AGAAGATAAAAAGGTACAGAAAAAAGGAGAAAAAGAGGAAGACAAAAAGGTTCAAAAGAAATCCGATAAGGAAGAAGATA
AAAAAGTACAGAAAAAGGAAAAAAAAGAAGAAGACAAGAAAGTACAGAAAAAATGTGCCGATTGCGAAAACGAAGACAAG
AAGGCTCAGAAGAAAGAAGAAAAAAAAGACGAAAAACCAGTTCAGGCAAAGTTTAAGGAATCAAACTCAGTAAATGAAGG
AGTCGAAAATACTCTCAACAGCTCAAAAGGCGGCGGCAGTGCTATGGATAAAAATACAAAGCAGGAAATGGAATCTGGTT
TTGGTGCCGATTTCAGCAATGTAAACATCCATACAGACAGCAAAGCTGTACAAATGAGTGAAGAACTGGGCGCGCAGGCT
TTTACACACGGCAGCGATGTTTATTTCAATAAAGGAAAATACAACCCAGACTCTAAAGAAGGTAAACATTTGCTTGCGCA
TGAACTCACGCACACAATACAGCAAACAGGCAGTAAAGCCCGAAATAATGTTCAAAAAAAGGACATGCTGCAATTATCGA
CAATGCCCTGGAACATTAGCCGATGGACAACTCAGGTAAGAGAGTCTAATAATTTTACCGTGAGTAATGGCGGAACGGTT
ACAGTAACATCAAATTTAGCTTGGGATGGTCCGCCAAGATGCAGGGATATTGCCAGCACAATAGAAGTAAATATATATAG
AAAAAGATTTTTAATAGACAGCAAAGAACATAGCGCCTCAATTTCATTATCAGGAGGAAGTACTTCGGTTTCTAATTTAA
CTGATGGCACTTATTATGTAGAAATTGTCTTAAGCGGCTATAATGGCGATCCAACACATTGCAGTTTAGCAGGAAGAGTT
GACATTGATGCAACCTGA

Upstream 100 bases:

>100_bases
AGATAAAAAATGCATTAGAGAAAGAAGGTATTGTGGCGAGTAATGCACAGTTTGTTTAGTGAAACAAATTAGTAATCCAA
AATGGTAAAAAGGACTAATC

Downstream 100 bases:

>100_bases
TAACGAAATGATTTTCTGTAAAATATAATAATCAAATATGCCAGTTTTAACCAAAAAAACAAATACGAATCCTTCGCACT
CCTCGTCACACCATGACAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MREFEQKKAVNHSPSTFFGPKVQKKLTTGTVGDKYETEADSVADKVVNKRNTGGLLQSKSENTVQQKPISETISTVQKQD
LAQEKPLQKKGKEKEEDKKVQKKSDKEEDKKVQKKGEKEEDKKVQKKSDKEEDKKVQKKEKKEEDKKVQKKCADCENEDK
KAQKKEEKKDEKPVQAKFKESNSVNEGVENTLNSSKGGGSAMDKNTKQEMESGFGADFSNVNIHTDSKAVQMSEELGAQA
FTHGSDVYFNKGKYNPDSKEGKHLLAHELTHTIQQTGSKARNNVQKKDMLQLSTMPWNISRWTTQVRESNNFTVSNGGTV
TVTSNLAWDGPPRCRDIASTIEVNIYRKRFLIDSKEHSASISLSGGSTSVSNLTDGTYYVEIVLSGYNGDPTHCSLAGRV
DIDAT

Sequences:

>Translated_405_residues
MREFEQKKAVNHSPSTFFGPKVQKKLTTGTVGDKYETEADSVADKVVNKRNTGGLLQSKSENTVQQKPISETISTVQKQD
LAQEKPLQKKGKEKEEDKKVQKKSDKEEDKKVQKKGEKEEDKKVQKKSDKEEDKKVQKKEKKEEDKKVQKKCADCENEDK
KAQKKEEKKDEKPVQAKFKESNSVNEGVENTLNSSKGGGSAMDKNTKQEMESGFGADFSNVNIHTDSKAVQMSEELGAQA
FTHGSDVYFNKGKYNPDSKEGKHLLAHELTHTIQQTGSKARNNVQKKDMLQLSTMPWNISRWTTQVRESNNFTVSNGGTV
TVTSNLAWDGPPRCRDIASTIEVNIYRKRFLIDSKEHSASISLSGGSTSVSNLTDGTYYVEIVLSGYNGDPTHCSLAGRV
DIDAT
>Mature_405_residues
MREFEQKKAVNHSPSTFFGPKVQKKLTTGTVGDKYETEADSVADKVVNKRNTGGLLQSKSENTVQQKPISETISTVQKQD
LAQEKPLQKKGKEKEEDKKVQKKSDKEEDKKVQKKGEKEEDKKVQKKSDKEEDKKVQKKEKKEEDKKVQKKCADCENEDK
KAQKKEEKKDEKPVQAKFKESNSVNEGVENTLNSSKGGGSAMDKNTKQEMESGFGADFSNVNIHTDSKAVQMSEELGAQA
FTHGSDVYFNKGKYNPDSKEGKHLLAHELTHTIQQTGSKARNNVQKKDMLQLSTMPWNISRWTTQVRESNNFTVSNGGTV
TVTSNLAWDGPPRCRDIASTIEVNIYRKRFLIDSKEHSASISLSGGSTSVSNLTDGTYYVEIVLSGYNGDPTHCSLAGRV
DIDAT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45238; Mature: 45238

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREFEQKKAVNHSPSTFFGPKVQKKLTTGTVGDKYETEADSVADKVVNKRNTGGLLQSKS
CCHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC
ENTVQQKPISETISTVQKQDLAQEKPLQKKGKEKEEDKKVQKKSDKEEDKKVQKKGEKEE
CCHHHHCCHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHCCHHHHHHHHHCCCCHH
DKKVQKKSDKEEDKKVQKKEKKEEDKKVQKKCADCENEDKKAQKKEEKKDEKPVQAKFKE
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHH
SNSVNEGVENTLNSSKGGGSAMDKNTKQEMESGFGADFSNVNIHTDSKAVQMSEELGAQA
CCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHCHHH
FTHGSDVYFNKGKYNPDSKEGKHLLAHELTHTIQQTGSKARNNVQKKDMLQLSTMPWNIS
HCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHH
RWTTQVRESNNFTVSNGGTVTVTSNLAWDGPPRCRDIASTIEVNIYRKRFLIDSKEHSAS
HHHHHHHCCCCEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHEEHHHHEECCCCCCCE
ISLSGGSTSVSNLTDGTYYVEIVLSGYNGDPTHCSLAGRVDIDAT
EEECCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEECCEECCCC
>Mature Secondary Structure
MREFEQKKAVNHSPSTFFGPKVQKKLTTGTVGDKYETEADSVADKVVNKRNTGGLLQSKS
CCHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC
ENTVQQKPISETISTVQKQDLAQEKPLQKKGKEKEEDKKVQKKSDKEEDKKVQKKGEKEE
CCHHHHCCHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHCCHHHHHHHHHCCCCHH
DKKVQKKSDKEEDKKVQKKEKKEEDKKVQKKCADCENEDKKAQKKEEKKDEKPVQAKFKE
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHH
SNSVNEGVENTLNSSKGGGSAMDKNTKQEMESGFGADFSNVNIHTDSKAVQMSEELGAQA
CCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHCHHH
FTHGSDVYFNKGKYNPDSKEGKHLLAHELTHTIQQTGSKARNNVQKKDMLQLSTMPWNIS
HCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHH
RWTTQVRESNNFTVSNGGTVTVTSNLAWDGPPRCRDIASTIEVNIYRKRFLIDSKEHSAS
HHHHHHHCCCCEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHEEHHHHEECCCCCCCE
ISLSGGSTSVSNLTDGTYYVEIVLSGYNGDPTHCSLAGRVDIDAT
EEECCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEECCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA