| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300877
Identifier: 146300877
GI number: 146300877
Start: 3722344
End: 3722904
Strand: Direct
Name: 146300877
Synonym: Fjoh_3132
Alternate gene names: NA
Gene position: 3722344-3722904 (Clockwise)
Preceding gene: 146300876
Following gene: 146300885
Centisome position: 61.05
GC content: 29.23
Gene sequence:
>561_bases ATGCAGTCAGAAAAATTTATTACGGCTCTTTTAGAGCAGACAGAAAAGATTATACAGCAAGCTGAAAAACTAAAAACGTA TGATTTAAAGGTATTAACATGGAAAGAAGATGAGATTTCCTGGAACATTCTTGAATGCCTCGAACATTTAAACAGGTACG GGAATTTTTATCTGCCGGAAATAGAAAAGAAAATCAAAAGTACTGACAGCAGATCTGAAATTGAATTTAAAAGCGGTTTA ATAGGTAGTTATTTTGCAAAAAGCATGCTGCCCAAAGAGAAATTAAACAAAATGAAAACTTTTAAGGATAAAAATCCTTT AAATGAAAAACTTGACAAAACAGTTATCGACCAATTTATAAAGCAGCAGTTCAAATTGCTTGATTTGTTAAAACAATCGC GAAATGTAAGTTTGAACAAAGTAAAAATTAAAATATCGATCTCAAGATTAATCACTCTAAAACTAGGCGATACTTTTGAA TTTTACATTAATCATATTATAAGACATTTAAAGCAGATAGAAAAAATACAATCGCTGGCTAAAATCTCTTATATAAATTG A
Upstream 100 bases:
>100_bases TAAGAATGAGTCCTGAAACTTTATCACGCCTGAAAAAGTCTTGATTTCAATCAAGATTTATAAAAATCTATTTTTTGACC TTTACATAAAAATTAAATTT
Downstream 100 bases:
>100_bases TAAACAGCTATAAGACTATAAAATACAAGCTTTAATTTTTTGGCAGGTAGATCCAAAAAGTTGTTCCCTTTCCTGGTATA CTGGTAAAATTAATGGTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MQSEKFITALLEQTEKIIQQAEKLKTYDLKVLTWKEDEISWNILECLEHLNRYGNFYLPEIEKKIKSTDSRSEIEFKSGL IGSYFAKSMLPKEKLNKMKTFKDKNPLNEKLDKTVIDQFIKQQFKLLDLLKQSRNVSLNKVKIKISISRLITLKLGDTFE FYINHIIRHLKQIEKIQSLAKISYIN
Sequences:
>Translated_186_residues MQSEKFITALLEQTEKIIQQAEKLKTYDLKVLTWKEDEISWNILECLEHLNRYGNFYLPEIEKKIKSTDSRSEIEFKSGL IGSYFAKSMLPKEKLNKMKTFKDKNPLNEKLDKTVIDQFIKQQFKLLDLLKQSRNVSLNKVKIKISISRLITLKLGDTFE FYINHIIRHLKQIEKIQSLAKISYIN >Mature_186_residues MQSEKFITALLEQTEKIIQQAEKLKTYDLKVLTWKEDEISWNILECLEHLNRYGNFYLPEIEKKIKSTDSRSEIEFKSGL IGSYFAKSMLPKEKLNKMKTFKDKNPLNEKLDKTVIDQFIKQQFKLLDLLKQSRNVSLNKVKIKISISRLITLKLGDTFE FYINHIIRHLKQIEKIQSLAKISYIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22044; Mature: 22044
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSEKFITALLEQTEKIIQQAEKLKTYDLKVLTWKEDEISWNILECLEHLNRYGNFYLPE CCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCHH IEKKIKSTDSRSEIEFKSGLIGSYFAKSMLPKEKLNKMKTFKDKNPLNEKLDKTVIDQFI HHHHHHCCCCCCHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHH KQQFKLLDLLKQSRNVSLNKVKIKISISRLITLKLGDTFEFYINHIIRHLKQIEKIQSLA HHHHHHHHHHHHHCCCCEEEEEEEEEHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH KISYIN HHHCCC >Mature Secondary Structure MQSEKFITALLEQTEKIIQQAEKLKTYDLKVLTWKEDEISWNILECLEHLNRYGNFYLPE CCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCHH IEKKIKSTDSRSEIEFKSGLIGSYFAKSMLPKEKLNKMKTFKDKNPLNEKLDKTVIDQFI HHHHHHCCCCCCHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHH KQQFKLLDLLKQSRNVSLNKVKIKISISRLITLKLGDTFEFYINHIIRHLKQIEKIQSLA HHHHHHHHHHHHHCCCCEEEEEEEEEHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH KISYIN HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA