| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300876
Identifier: 146300876
GI number: 146300876
Start: 3721781
End: 3722287
Strand: Direct
Name: 146300876
Synonym: Fjoh_3131
Alternate gene names: NA
Gene position: 3721781-3722287 (Clockwise)
Preceding gene: 146300853
Following gene: 146300877
Centisome position: 61.04
GC content: 33.33
Gene sequence:
>507_bases ATGAAAGAAATCATAGCGCTTTCAGACAAAGAGGTAACCATTAATAGAAATGAATTCCTAAAAGTAAATGGCAGTATAGA TACCAATTTATACTATATAGAAAGCGGCAGCATGAGAATTTTTGTTTTGGACGGCAGCGATGAACAAAACATTAGATTTG GATATACAGGAAATTTAATCGTTGCACTTGATTCTTTTCTAACGGGACAACCTTCTAATTTGTGCATTCAAGCCATAAAA AAAACAGTTTTAAAAGTGATAACCAAAAAACAGATTGATGAATTTTTAGCCTTAAAAAACAACCAAATTTTATGGATAGC AATTTTAGAAAATCTTGGAGTCCAACAGCTGGAACGCGAAATTGACCTTCTGAAAAATTCGCCGAAAGAAAGATATGAAA GAGTCTTAAAACGAAGTCCGCAGCTTTTTCAGGAAATTCCAAACAGGCACATTGCAAATTATTTAAGAATGAGTCCTGAA ACTTTATCACGCCTGAAAAAGTCTTGA
Upstream 100 bases:
>100_bases TAAATTCCGTTTGAAAGAAAACTAAATTTATGATGTGATATAAATCTAATTATAGATTTTTGTAATCAGAGTTGATCCCT AACCCACAAACAAAGACAAA
Downstream 100 bases:
>100_bases TTTCAATCAAGATTTATAAAAATCTATTTTTTGACCTTTACATAAAAATTAAATTTATGCAGTCAGAAAAATTTATTACG GCTCTTTTAGAGCAGACAGA
Product: cyclic nucleotide-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MKEIIALSDKEVTINRNEFLKVNGSIDTNLYYIESGSMRIFVLDGSDEQNIRFGYTGNLIVALDSFLTGQPSNLCIQAIK KTVLKVITKKQIDEFLALKNNQILWIAILENLGVQQLEREIDLLKNSPKERYERVLKRSPQLFQEIPNRHIANYLRMSPE TLSRLKKS
Sequences:
>Translated_168_residues MKEIIALSDKEVTINRNEFLKVNGSIDTNLYYIESGSMRIFVLDGSDEQNIRFGYTGNLIVALDSFLTGQPSNLCIQAIK KTVLKVITKKQIDEFLALKNNQILWIAILENLGVQQLEREIDLLKNSPKERYERVLKRSPQLFQEIPNRHIANYLRMSPE TLSRLKKS >Mature_168_residues MKEIIALSDKEVTINRNEFLKVNGSIDTNLYYIESGSMRIFVLDGSDEQNIRFGYTGNLIVALDSFLTGQPSNLCIQAIK KTVLKVITKKQIDEFLALKNNQILWIAILENLGVQQLEREIDLLKNSPKERYERVLKRSPQLFQEIPNRHIANYLRMSPE TLSRLKKS
Specific function: Unknown
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19398; Mature: 19398
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEIIALSDKEVTINRNEFLKVNGSIDTNLYYIESGSMRIFVLDGSDEQNIRFGYTGNLI CCCCEEECCCEEEECCCCEEEECCCCCCEEEEEECCCEEEEEEECCCCCCEEEECCCCEE VALDSFLTGQPSNLCIQAIKKTVLKVITKKQIDEFLALKNNQILWIAILENLGVQQLERE EEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHCCHHHHHHH IDLLKNSPKERYERVLKRSPQLFQEIPNRHIANYLRMSPETLSRLKKS HHHHHCCHHHHHHHHHHCCHHHHHHCCHHHHHHHHHCCHHHHHHHHCC >Mature Secondary Structure MKEIIALSDKEVTINRNEFLKVNGSIDTNLYYIESGSMRIFVLDGSDEQNIRFGYTGNLI CCCCEEECCCEEEECCCCEEEECCCCCCEEEEEECCCEEEEEEECCCCCCEEEECCCCEE VALDSFLTGQPSNLCIQAIKKTVLKVITKKQIDEFLALKNNQILWIAILENLGVQQLERE EEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHCCHHHHHHH IDLLKNSPKERYERVLKRSPQLFQEIPNRHIANYLRMSPETLSRLKKS HHHHHCCHHHHHHHHHHCCHHHHHHCCHHHHHHHHHCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA