Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146300853

Identifier: 146300853

GI number: 146300853

Start: 3676212

End: 3677048

Strand: Direct

Name: 146300853

Synonym: Fjoh_3108

Alternate gene names: NA

Gene position: 3676212-3677048 (Clockwise)

Preceding gene: 146300850

Following gene: 146300876

Centisome position: 60.3

GC content: 33.81

Gene sequence:

>837_bases
ATGAAAAAACTTTTCTTATCATCTGTACTGCTTTTTCCTATTCATTCCATTCTTTTTTTGACCCCTGTCCCTGTTCAGAG
CGCTGTTAATCTGGAAGCTGTATCCATTCAAAACTTTGAAGCTGACTTGCCTGCAAAATCAGTAAGTGTATTTGAAACGG
AGAGACACCGGGTATGGATTAACTTAACAAATACAAAGGGTCTTTTTAAACAAATTTTGATTGCATATATAACAGGAGCG
ACCAATGGATGGGATCATAATTATGATGCTCTCACAATGGATTCGAATCCCTATGCAGATTTTTACAGTATTAACGATGA
TAAAAAACTGGTTATTCAAGGACGCGCAGTTCCCTTTGACCCAGCAGATACTATACCTTTGGGCTACAAATCTAACATTA
CAGGTGATATGAATATAGCTATAGATCATGTAGAAGGCGAATTAACCAATAGGGCTATTTATTTACATGATAAACAAACC
GGGACTGTTCATAATTTAAAAAGCGGAGGTTATACATTCTCTACTCTAACAGGTGTTTTTACAGATCGTTTTGTTTTAAG
TTACAGTCCAGATAAAAACTTGGGATTAGATAATTTTGAAAATTCCCCATTGGGTCTTATTGTTACTTCTAAAAATAAAA
TCATAAAAATAAAATCTAACCAGTCACCTTTAAAACAGGTATCTGTTTTTGATGCTGCAGGAAAGCTGCTTTACATAGTG
CAAAAAATCGAAAAAGCTGAATTAGAGATTTCAAGCATTGAGTCAGGATCTCAAGTTTTATTTGTTAAAACAATACTGAA
TAATGGGAATACAATTACTAAGAAGATACTTTTCTAG

Upstream 100 bases:

>100_bases
AATATTTATTCTATTGTGTCTTCCTATTGATAATTTTTAAAATTTTAAAAGAACTAAAGTATCAGCGCATAGCTTTTATT
AATATTTAAATTATCGTATT

Downstream 100 bases:

>100_bases
TAAAATTAAGTCTTAAAAATGCCACGCGGATATTATAAAGATTCCGCGTGCTTTTTTATAATATACAAACTCGTGATTTT
ACTGATTTTACTTCCTTTAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MKKLFLSSVLLFPIHSILFLTPVPVQSAVNLEAVSIQNFEADLPAKSVSVFETERHRVWINLTNTKGLFKQILIAYITGA
TNGWDHNYDALTMDSNPYADFYSINDDKKLVIQGRAVPFDPADTIPLGYKSNITGDMNIAIDHVEGELTNRAIYLHDKQT
GTVHNLKSGGYTFSTLTGVFTDRFVLSYSPDKNLGLDNFENSPLGLIVTSKNKIIKIKSNQSPLKQVSVFDAAGKLLYIV
QKIEKAELEISSIESGSQVLFVKTILNNGNTITKKILF

Sequences:

>Translated_278_residues
MKKLFLSSVLLFPIHSILFLTPVPVQSAVNLEAVSIQNFEADLPAKSVSVFETERHRVWINLTNTKGLFKQILIAYITGA
TNGWDHNYDALTMDSNPYADFYSINDDKKLVIQGRAVPFDPADTIPLGYKSNITGDMNIAIDHVEGELTNRAIYLHDKQT
GTVHNLKSGGYTFSTLTGVFTDRFVLSYSPDKNLGLDNFENSPLGLIVTSKNKIIKIKSNQSPLKQVSVFDAAGKLLYIV
QKIEKAELEISSIESGSQVLFVKTILNNGNTITKKILF
>Mature_278_residues
MKKLFLSSVLLFPIHSILFLTPVPVQSAVNLEAVSIQNFEADLPAKSVSVFETERHRVWINLTNTKGLFKQILIAYITGA
TNGWDHNYDALTMDSNPYADFYSINDDKKLVIQGRAVPFDPADTIPLGYKSNITGDMNIAIDHVEGELTNRAIYLHDKQT
GTVHNLKSGGYTFSTLTGVFTDRFVLSYSPDKNLGLDNFENSPLGLIVTSKNKIIKIKSNQSPLKQVSVFDAAGKLLYIV
QKIEKAELEISSIESGSQVLFVKTILNNGNTITKKILF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30860; Mature: 30860

Theoretical pI: Translated: 7.89; Mature: 7.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLFLSSVLLFPIHSILFLTPVPVQSAVNLEAVSIQNFEADLPAKSVSVFETERHRVWI
CCHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCEEEEE
NLTNTKGLFKQILIAYITGATNGWDHNYDALTMDSNPYADFYSINDDKKLVIQGRAVPFD
EEECCHHHHHHHHHHHEECCCCCCCCCCCEEEECCCCCCEEEEECCCCEEEEECCCCCCC
PADTIPLGYKSNITGDMNIAIDHVEGELTNRAIYLHDKQTGTVHNLKSGGYTFSTLTGVF
CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCEEECCCCCEEEEHHHHHH
TDRFVLSYSPDKNLGLDNFENSPLGLIVTSKNKIIKIKSNQSPLKQVSVFDAAGKLLYIV
HCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHCCHHHHHH
QKIEKAELEISSIESGSQVLFVKTILNNGNTITKKILF
HHHHHHHEEEEECCCCCEEEEEEEEECCCCEEEEEECC
>Mature Secondary Structure
MKKLFLSSVLLFPIHSILFLTPVPVQSAVNLEAVSIQNFEADLPAKSVSVFETERHRVWI
CCHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCEEEEE
NLTNTKGLFKQILIAYITGATNGWDHNYDALTMDSNPYADFYSINDDKKLVIQGRAVPFD
EEECCHHHHHHHHHHHEECCCCCCCCCCCEEEECCCCCCEEEEECCCCEEEEECCCCCCC
PADTIPLGYKSNITGDMNIAIDHVEGELTNRAIYLHDKQTGTVHNLKSGGYTFSTLTGVF
CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCEEECCCCCEEEEHHHHHH
TDRFVLSYSPDKNLGLDNFENSPLGLIVTSKNKIIKIKSNQSPLKQVSVFDAAGKLLYIV
HCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHCCHHHHHH
QKIEKAELEISSIESGSQVLFVKTILNNGNTITKKILF
HHHHHHHEEEEECCCCCEEEEEEEEECCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA