Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
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Accession | NC_009441 |
Length | 6,096,872 |
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The map label for this gene is sglT [H]
Identifier: 146300861
GI number: 146300861
Start: 3690931
End: 3692499
Strand: Reverse
Name: sglT [H]
Synonym: Fjoh_3116
Alternate gene names: 146300861
Gene position: 3692499-3690931 (Counterclockwise)
Preceding gene: 146300862
Following gene: 146300860
Centisome position: 60.56
GC content: 37.22
Gene sequence:
>1569_bases ATGTATATTTACAGAAGCAAAAAAACTGCAGCGACCAGTTCAAACGAATACTTTTTAGCCGAAGGCTCACTTACCTGGTG GGCAATTGGAGCGTCGCTGATTGCTTCTAATATTTCAGCAGAACACTTTATTGGCATGAGTGGTTCGGGATTTGCCATCG GACTTGCCATTGCTTCTTACGAATGGATGTCTGCCGCTACTTTGATTATCGTAGCAATGTTTATCCTGCCCATTTATCTT AAGAATAAGATATTTACAATGCCGCAGTTTTTAGCCAAAAGATACAGCGGTACCGTAAGTACTATTATGGCAATTATATG GCTGTTGATTTACGTATTTGTTAATCTTACCTCTATCATTTATCTGGGTGCTCTGGCAATTTCGTCTATTGCGCCCGTTA GCTTTCAGTTTTGTGTTATCGGTTTGAGTTTATTCTCTGTTATTGTAACTTTAGGAGGAATGAAAGTCATAGGATATACT GATATGTTTCAGGTTATTGTGTTAATTCTTGGAGGATTAGTAACCACTTATTTGGCATTGACTTTACTTTCAGATCAGTT TGGTTTTGGAAAAGATATTCTAAAAGGTCTTGCTGTGATAGCAGATCAGGCGCCAGATCATCTACATATGATTTTAGACG AATCCAATCCGCATTATAATGAATTGCCGGGAATGTCAGTTTTAGTGGGCGGAATGTTAATCAATAATCTGGCCTATTGG GGATGTAATCAATATATTGTTCAAAGAGCTTTAGGAGCCGATTTGAAAACGGCAAGAAAAGGAATTTTATTTGCTGCTTT TCTAAAATTATTAGTTCCAATTATTGCTGTTTTGCCAGGTATTGCCATGTTTGTAATGCACCAAAATGGAGCTTTCCAAC AGGAAATGGTTGATGCTGCAGGAGTTTTAAAACCAGATCATGCATATCCAACTTTAATGAATTTGCTTCCTGCCGGATTA AAAGGTGTGGCTTTAGCAGCTTTAACAGCGGCAATTGTAGCTTCTTTAGCAGGAAAGGCCAATAGCATTTCGACTATTTT TTCTTTAGATATTTATAAAAAATATTTCAATTCGCAGGCATCAGAAAAAAAACTGGTTCGTACCGGAAGATGGTGTGTTG TAGTTTGTATGATTATCGCGGCTTTTGTAGCGCCGGCATTAAAAACTTTAGATCAGGCATATCAGTTTATTCAGGAATAT GTTGGTTTTTTCTCTCCAGGCGTTTTGGCGATTTTCTTATTGGGAATGTTTTGGAAAAAAACAACACCATCAGCTGGACT CGCAGGCGCATTATTGACAGTGCCAATTGCCGCGGTTTTAAAATTCCTCCCGATGTGGACAGAAGGTACTTTCCCTGATT ATCCATTTTTAGATAGAATGACTATTGTTTTCTTTATGATTGTATTCATAATGGTTGGTATTAGTTTAGCAAAACCAGCA TCTGAGGAAGAGTCTGAAATTCATAAAATAGATGTAGATAAATCAATGTTCAAAGTCTCTTCTGAATTTATTGTAGGTTC CTTTATTATCAGCGGGATATTAGTGGCTTTGTATACTGTTTTCTGGTAA
Upstream 100 bases:
>100_bases TTACTATCTAACCACACAATAACCACACATTATGAATGTATTACAAACCGCAGATTACATTGTTTTCTTTATTTATTTTG TCATAGTCACGGCTTATGGA
Downstream 100 bases:
>100_bases ATTTTATTGCCACAGATTTTAAGATTAGAAAGGATTTTTTTCACGCAGATTCTGCAGATTTTGGCAGATTAAATTAAATT TCTTTTAAAAAAATCCGTGG
Product: SSS family solute/sodium (Na+) symporter
Products: NA
Alternate protein names: Na(+)/glucose symporter [H]
Number of amino acids: Translated: 522; Mature: 522
Protein sequence:
>522_residues MYIYRSKKTAATSSNEYFLAEGSLTWWAIGASLIASNISAEHFIGMSGSGFAIGLAIASYEWMSAATLIIVAMFILPIYL KNKIFTMPQFLAKRYSGTVSTIMAIIWLLIYVFVNLTSIIYLGALAISSIAPVSFQFCVIGLSLFSVIVTLGGMKVIGYT DMFQVIVLILGGLVTTYLALTLLSDQFGFGKDILKGLAVIADQAPDHLHMILDESNPHYNELPGMSVLVGGMLINNLAYW GCNQYIVQRALGADLKTARKGILFAAFLKLLVPIIAVLPGIAMFVMHQNGAFQQEMVDAAGVLKPDHAYPTLMNLLPAGL KGVALAALTAAIVASLAGKANSISTIFSLDIYKKYFNSQASEKKLVRTGRWCVVVCMIIAAFVAPALKTLDQAYQFIQEY VGFFSPGVLAIFLLGMFWKKTTPSAGLAGALLTVPIAAVLKFLPMWTEGTFPDYPFLDRMTIVFFMIVFIMVGISLAKPA SEEESEIHKIDVDKSMFKVSSEFIVGSFIISGILVALYTVFW
Sequences:
>Translated_522_residues MYIYRSKKTAATSSNEYFLAEGSLTWWAIGASLIASNISAEHFIGMSGSGFAIGLAIASYEWMSAATLIIVAMFILPIYL KNKIFTMPQFLAKRYSGTVSTIMAIIWLLIYVFVNLTSIIYLGALAISSIAPVSFQFCVIGLSLFSVIVTLGGMKVIGYT DMFQVIVLILGGLVTTYLALTLLSDQFGFGKDILKGLAVIADQAPDHLHMILDESNPHYNELPGMSVLVGGMLINNLAYW GCNQYIVQRALGADLKTARKGILFAAFLKLLVPIIAVLPGIAMFVMHQNGAFQQEMVDAAGVLKPDHAYPTLMNLLPAGL KGVALAALTAAIVASLAGKANSISTIFSLDIYKKYFNSQASEKKLVRTGRWCVVVCMIIAAFVAPALKTLDQAYQFIQEY VGFFSPGVLAIFLLGMFWKKTTPSAGLAGALLTVPIAAVLKFLPMWTEGTFPDYPFLDRMTIVFFMIVFIMVGISLAKPA SEEESEIHKIDVDKSMFKVSSEFIVGSFIISGILVALYTVFW >Mature_522_residues MYIYRSKKTAATSSNEYFLAEGSLTWWAIGASLIASNISAEHFIGMSGSGFAIGLAIASYEWMSAATLIIVAMFILPIYL KNKIFTMPQFLAKRYSGTVSTIMAIIWLLIYVFVNLTSIIYLGALAISSIAPVSFQFCVIGLSLFSVIVTLGGMKVIGYT DMFQVIVLILGGLVTTYLALTLLSDQFGFGKDILKGLAVIADQAPDHLHMILDESNPHYNELPGMSVLVGGMLINNLAYW GCNQYIVQRALGADLKTARKGILFAAFLKLLVPIIAVLPGIAMFVMHQNGAFQQEMVDAAGVLKPDHAYPTLMNLLPAGL KGVALAALTAAIVASLAGKANSISTIFSLDIYKKYFNSQASEKKLVRTGRWCVVVCMIIAAFVAPALKTLDQAYQFIQEY VGFFSPGVLAIFLLGMFWKKTTPSAGLAGALLTVPIAAVLKFLPMWTEGTFPDYPFLDRMTIVFFMIVFIMVGISLAKPA SEEESEIHKIDVDKSMFKVSSEFIVGSFIISGILVALYTVFW
Specific function: Actively transports glucose into cells by Na(+) cotransport [H]
COG id: COG4146
COG function: function code R; Predicted symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI17941285, Length=440, Percent_Identity=32.2727272727273, Blast_Score=218, Evalue=1e-56, Organism=Homo sapiens, GI4507031, Length=427, Percent_Identity=31.1475409836066, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI110835708, Length=529, Percent_Identity=29.6786389413989, Blast_Score=196, Evalue=5e-50, Organism=Homo sapiens, GI14140236, Length=448, Percent_Identity=29.0178571428571, Blast_Score=196, Evalue=6e-50, Organism=Homo sapiens, GI4507033, Length=437, Percent_Identity=30.4347826086957, Blast_Score=179, Evalue=4e-45, Organism=Homo sapiens, GI109659836, Length=468, Percent_Identity=32.2649572649573, Blast_Score=178, Evalue=9e-45, Organism=Homo sapiens, GI109659839, Length=484, Percent_Identity=31.198347107438, Blast_Score=176, Evalue=7e-44, Organism=Homo sapiens, GI206597483, Length=446, Percent_Identity=29.5964125560538, Blast_Score=169, Evalue=6e-42, Organism=Homo sapiens, GI206597487, Length=471, Percent_Identity=28.6624203821656, Blast_Score=159, Evalue=8e-39, Organism=Homo sapiens, GI256985183, Length=432, Percent_Identity=23.8425925925926, Blast_Score=73, Evalue=5e-13, Organism=Homo sapiens, GI4507035, Length=428, Percent_Identity=23.3644859813084, Blast_Score=69, Evalue=8e-12, Organism=Homo sapiens, GI157671931, Length=361, Percent_Identity=22.4376731301939, Blast_Score=68, Evalue=2e-11, Organism=Escherichia coli, GI1790113, Length=513, Percent_Identity=30.0194931773879, Blast_Score=189, Evalue=3e-49, Organism=Caenorhabditis elegans, GI115533094, Length=424, Percent_Identity=20.7547169811321, Blast_Score=65, Evalue=7e-11, Organism=Drosophila melanogaster, GI161076631, Length=450, Percent_Identity=24.6666666666667, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI19920916, Length=459, Percent_Identity=24.6187363834423, Blast_Score=79, Evalue=7e-15, Organism=Drosophila melanogaster, GI28573698, Length=452, Percent_Identity=24.1150442477876, Blast_Score=79, Evalue=8e-15, Organism=Drosophila melanogaster, GI221379702, Length=408, Percent_Identity=23.7745098039216, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI24651741, Length=459, Percent_Identity=20.9150326797386, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI281364280, Length=436, Percent_Identity=22.9357798165138, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI24651739, Length=449, Percent_Identity=20.2672605790646, Blast_Score=65, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001734 - InterPro: IPR018212 - InterPro: IPR019900 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 56843; Mature: 56843
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYIYRSKKTAATSSNEYFLAEGSLTWWAIGASLIASNISAEHFIGMSGSGFAIGLAIASY CCEECCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCHHHEECCCCCCCEEHHHHHHH EWMSAATLIIVAMFILPIYLKNKIFTMPQFLAKRYSGTVSTIMAIIWLLIYVFVNLTSII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH YLGALAISSIAPVSFQFCVIGLSLFSVIVTLGGMKVIGYTDMFQVIVLILGGLVTTYLAL HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHH TLLSDQFGFGKDILKGLAVIADQAPDHLHMILDESNPHYNELPGMSVLVGGMLINNLAYW HHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH GCNQYIVQRALGADLKTARKGILFAAFLKLLVPIIAVLPGIAMFVMHQNGAFQQEMVDAA CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH GVLKPDHAYPTLMNLLPAGLKGVALAALTAAIVASLAGKANSISTIFSLDIYKKYFNSQA CCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC SEKKLVRTGRWCVVVCMIIAAFVAPALKTLDQAYQFIQEYVGFFSPGVLAIFLLGMFWKK HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHC TTPSAGLAGALLTVPIAAVLKFLPMWTEGTFPDYPFLDRMTIVFFMIVFIMVGISLAKPA CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC SEEESEIHKIDVDKSMFKVSSEFIVGSFIISGILVALYTVFW CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MYIYRSKKTAATSSNEYFLAEGSLTWWAIGASLIASNISAEHFIGMSGSGFAIGLAIASY CCEECCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCHHHEECCCCCCCEEHHHHHHH EWMSAATLIIVAMFILPIYLKNKIFTMPQFLAKRYSGTVSTIMAIIWLLIYVFVNLTSII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH YLGALAISSIAPVSFQFCVIGLSLFSVIVTLGGMKVIGYTDMFQVIVLILGGLVTTYLAL HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHH TLLSDQFGFGKDILKGLAVIADQAPDHLHMILDESNPHYNELPGMSVLVGGMLINNLAYW HHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH GCNQYIVQRALGADLKTARKGILFAAFLKLLVPIIAVLPGIAMFVMHQNGAFQQEMVDAA CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH GVLKPDHAYPTLMNLLPAGLKGVALAALTAAIVASLAGKANSISTIFSLDIYKKYFNSQA CCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC SEKKLVRTGRWCVVVCMIIAAFVAPALKTLDQAYQFIQEYVGFFSPGVLAIFLLGMFWKK HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHC TTPSAGLAGALLTVPIAAVLKFLPMWTEGTFPDYPFLDRMTIVFFMIVFIMVGISLAKPA CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC SEEESEIHKIDVDKSMFKVSSEFIVGSFIISGILVALYTVFW CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8652595; 10835424; 10757971 [H]