| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is mhpC [C]
Identifier: 146300850
GI number: 146300850
Start: 3673586
End: 3674461
Strand: Direct
Name: mhpC [C]
Synonym: Fjoh_3105
Alternate gene names: 146300850
Gene position: 3673586-3674461 (Clockwise)
Preceding gene: 146300849
Following gene: 146300853
Centisome position: 60.25
GC content: 35.62
Gene sequence:
>876_bases ATGAATCTTTACAACGACGAATCTTTAATACAGCAGATACCCGGTTTTAAAAATAACTATACTACAGTAAATGGAGTCAA TTTGCACTATGTAACGGGAGGACAAGGCAGTCCATTAGTCTTAATTCCGGGATGGCCGCAAACTTGGTGGAGTTATCGTA AAATTATGCCCATTTTAGCAGAAAAGCACAGCCTTATTGTTGTTGATTTACGAGGAATGGGTTCATCGGAAAAACCTTTA GACGGCTACACTAAAAAAAATATGGCCCAGGATATTCAATTGTTAATTGCACATTTGGGATACAAAAAAATAAATATTGC AGGTCATGATATTGGAGCTGCAGTTGCTTTTAGTTATGCTGCTAACTTTCCTGAAAATACAGATAAACTTATCATTTTAG ATACTCCGCACCCCGACGAAAACATATACAAACTGCCAATGATGCCTATTGGAAATCCTGTATTTCCTTGGTGGCTTGCT TTTAACCAAGTAAAACAACTACCCGAAGAATTGCTGGAAGGACGTTATGATATATTGCAAAATTATATCTTTAATCACCT TTTGATTGACCCCGAAGCAATTAATGAGTTTGACAGAAAAGTCTATGCTGAGGCCTATAACAATAAAGATGCAATAAGAA GCTCTAATGGCTGGTACCAAGCCTTTACTGAAGACATTCAGGATATCAAACAATACAAAAAAGTCCAAATCCCTGCCATA GGAATTGGAAGTCAGGAAGGAGCAAAAATGCTTAGTTATTTCTTTTCTGTTTATCTTGAAAATTTTAGCATAGAAGAAAT AGAAAATTCCGGTCACTTTATACATGAAGAAAAACCGGAGCTTACAGCGTTACTGATAAATAATTTTTTAATCTAA
Upstream 100 bases:
>100_bases TGGATTTCTTTGAAAGGAGGTATTAGTTTAAATAGATAAGAACTGTAATTAAATCCAGACTTAATTTCTACGGATATAAC GAATAAATAAAAAAGCAAAA
Downstream 100 bases:
>100_bases AAATCTTAATCATCTAATGTCAAAACTATGCAAGCCCGCAGGAATAACATGTGGGCTTGCATAATCTACAATATTTGGTT TAAAATCTGCTTCAAGTTAC
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: SEH; Cytosolic epoxide hydrolase; cEH; Epoxide hydratase [H]
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MNLYNDESLIQQIPGFKNNYTTVNGVNLHYVTGGQGSPLVLIPGWPQTWWSYRKIMPILAEKHSLIVVDLRGMGSSEKPL DGYTKKNMAQDIQLLIAHLGYKKINIAGHDIGAAVAFSYAANFPENTDKLIILDTPHPDENIYKLPMMPIGNPVFPWWLA FNQVKQLPEELLEGRYDILQNYIFNHLLIDPEAINEFDRKVYAEAYNNKDAIRSSNGWYQAFTEDIQDIKQYKKVQIPAI GIGSQEGAKMLSYFFSVYLENFSIEEIENSGHFIHEEKPELTALLINNFLI
Sequences:
>Translated_291_residues MNLYNDESLIQQIPGFKNNYTTVNGVNLHYVTGGQGSPLVLIPGWPQTWWSYRKIMPILAEKHSLIVVDLRGMGSSEKPL DGYTKKNMAQDIQLLIAHLGYKKINIAGHDIGAAVAFSYAANFPENTDKLIILDTPHPDENIYKLPMMPIGNPVFPWWLA FNQVKQLPEELLEGRYDILQNYIFNHLLIDPEAINEFDRKVYAEAYNNKDAIRSSNGWYQAFTEDIQDIKQYKKVQIPAI GIGSQEGAKMLSYFFSVYLENFSIEEIENSGHFIHEEKPELTALLINNFLI >Mature_291_residues MNLYNDESLIQQIPGFKNNYTTVNGVNLHYVTGGQGSPLVLIPGWPQTWWSYRKIMPILAEKHSLIVVDLRGMGSSEKPL DGYTKKNMAQDIQLLIAHLGYKKINIAGHDIGAAVAFSYAANFPENTDKLIILDTPHPDENIYKLPMMPIGNPVFPWWLA FNQVKQLPEELLEGRYDILQNYIFNHLLIDPEAINEFDRKVYAEAYNNKDAIRSSNGWYQAFTEDIQDIKQYKKVQIPAI GIGSQEGAKMLSYFFSVYLENFSIEEIENSGHFIHEEKPELTALLINNFLI
Specific function: Involved in catabolic degradation of epoxides. Shows highest activity towards C6 and C7 carbocyclic epoxides. Also active towards linear 1,2-epoxyalkanes [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm. Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. Epoxide hydrolase family [H]
Homologues:
Organism=Homo sapiens, GI218777837, Length=282, Percent_Identity=23.758865248227, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI27597073, Length=305, Percent_Identity=23.6065573770492, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI218777840, Length=134, Percent_Identity=33.5820895522388, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI13376164, Length=134, Percent_Identity=33.5820895522388, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI18777795, Length=104, Percent_Identity=31.7307692307692, Blast_Score=65, Evalue=6e-11, Organism=Caenorhabditis elegans, GI17554012, Length=292, Percent_Identity=27.3972602739726, Blast_Score=98, Evalue=4e-21, Organism=Caenorhabditis elegans, GI17562298, Length=290, Percent_Identity=18.9655172413793, Blast_Score=79, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 - InterPro: IPR010497 [H]
Pfam domain/function: PF00561 Abhydrolase_1; PF06441 EHN [H]
EC number: =3.3.2.10 [H]
Molecular weight: Translated: 33271; Mature: 33271
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLYNDESLIQQIPGFKNNYTTVNGVNLHYVTGGQGSPLVLIPGWPQTWWSYRKIMPILA CCCCCHHHHHHHCCCCCCCCEEECCCEEEEEECCCCCCEEEECCCCHHHHHHHHHHHHHH EKHSLIVVDLRGMGSSEKPLDGYTKKNMAQDIQLLIAHLGYKKINIAGHDIGAAVAFSYA CCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH ANFPENTDKLIILDTPHPDENIYKLPMMPIGNPVFPWWLAFNQVKQLPEELLEGRYDILQ CCCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH NYIFNHLLIDPEAINEFDRKVYAEAYNNKDAIRSSNGWYQAFTEDIQDIKQYKKVQIPAI HHHHHHHEECHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEE GIGSQEGAKMLSYFFSVYLENFSIEEIENSGHFIHEEKPELTALLINNFLI ECCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEECCCCHHHHHHHHHHCC >Mature Secondary Structure MNLYNDESLIQQIPGFKNNYTTVNGVNLHYVTGGQGSPLVLIPGWPQTWWSYRKIMPILA CCCCCHHHHHHHCCCCCCCCEEECCCEEEEEECCCCCCEEEECCCCHHHHHHHHHHHHHH EKHSLIVVDLRGMGSSEKPLDGYTKKNMAQDIQLLIAHLGYKKINIAGHDIGAAVAFSYA CCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH ANFPENTDKLIILDTPHPDENIYKLPMMPIGNPVFPWWLAFNQVKQLPEELLEGRYDILQ CCCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH NYIFNHLLIDPEAINEFDRKVYAEAYNNKDAIRSSNGWYQAFTEDIQDIKQYKKVQIPAI HHHHHHHEECHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEE GIGSQEGAKMLSYFFSVYLENFSIEEIENSGHFIHEEKPELTALLINNFLI ECCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEECCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9578475 [H]