Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146300839

Identifier: 146300839

GI number: 146300839

Start: 3662370

End: 3663086

Strand: Direct

Name: 146300839

Synonym: Fjoh_3094

Alternate gene names: NA

Gene position: 3662370-3663086 (Clockwise)

Preceding gene: 146300838

Following gene: 146300840

Centisome position: 60.07

GC content: 31.24

Gene sequence:

>717_bases
ATGATAGTCAAAATACTTGCGAGTAAAAAAATCTTATTACTTTTTATTAATTTATGTGTATTTCAATTATACGCACAGCA
AAAAAATAGCTTATCCCAACAGTTTCTAATGAATATTGAAATCAGACCAAGAGTCGAATATACTTCAAATTATTTTCTTC
CTCCCAACGATTCAATTGATCCTTATTTTATTATTACCCAGAGAAACAGAATTTCTATGCAGTATGCTAGAGAAAAATGG
CTTATTAAATCCGATTTACAGGAAATTCATCTTTGGGATGAAAACAGCAAAGCTTCCAAAGTTGGAAGCATTAATTTTTA
TCAATTGTATTTTGAGACTAAGATTAAATCTCTAAATGTACGATTGGGAAGGCAAAGTGTTTTATTAGATAATGGCAGAT
TATTTTCTGATGCTCCTTGGGCACAGCAAGGGAGAGCCCATGAAGGAATACGGATAATGAAATACTCAAAATATTTCTCT
AATGATTTTTTCTTTTTGTTTACCAGAAACTACAGCACTGAATTTGAGTCAGCCTACTCTCCTGTTGCATCAAATAGGTA
TAAATACCTGTTGATAAATAGTCTCAATTACAATAACAATCATGGATTTTCATTTAATTCATTGAATGCTGTTGATTTTT
TAGAAAACTCAAGTTCAGGGAAATTGTATACTCGTGCAACAGCAGGCGGAAGAATAGAATTTAAAACGAAACAATAG

Upstream 100 bases:

>100_bases
AGAACAAATTATAAATGCGGATTATCAAACGTAATTATAATATTGTAAATATGAATACTATTATTACTTTTATACACTAA
TTCTATAGGATATTAGAAGT

Downstream 100 bases:

>100_bases
TATTATACTTTAAATTCATATTGGCAGTTTGGACGTAATTCAAAAGGTCAAAAATTATTTACTTACTATTTTCAACCTGA
AGTTAAATTATCTCTATTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MIVKILASKKILLLFINLCVFQLYAQQKNSLSQQFLMNIEIRPRVEYTSNYFLPPNDSIDPYFIITQRNRISMQYAREKW
LIKSDLQEIHLWDENSKASKVGSINFYQLYFETKIKSLNVRLGRQSVLLDNGRLFSDAPWAQQGRAHEGIRIMKYSKYFS
NDFFFLFTRNYSTEFESAYSPVASNRYKYLLINSLNYNNNHGFSFNSLNAVDFLENSSSGKLYTRATAGGRIEFKTKQ

Sequences:

>Translated_238_residues
MIVKILASKKILLLFINLCVFQLYAQQKNSLSQQFLMNIEIRPRVEYTSNYFLPPNDSIDPYFIITQRNRISMQYAREKW
LIKSDLQEIHLWDENSKASKVGSINFYQLYFETKIKSLNVRLGRQSVLLDNGRLFSDAPWAQQGRAHEGIRIMKYSKYFS
NDFFFLFTRNYSTEFESAYSPVASNRYKYLLINSLNYNNNHGFSFNSLNAVDFLENSSSGKLYTRATAGGRIEFKTKQ
>Mature_238_residues
MIVKILASKKILLLFINLCVFQLYAQQKNSLSQQFLMNIEIRPRVEYTSNYFLPPNDSIDPYFIITQRNRISMQYAREKW
LIKSDLQEIHLWDENSKASKVGSINFYQLYFETKIKSLNVRLGRQSVLLDNGRLFSDAPWAQQGRAHEGIRIMKYSKYFS
NDFFFLFTRNYSTEFESAYSPVASNRYKYLLINSLNYNNNHGFSFNSLNAVDFLENSSSGKLYTRATAGGRIEFKTKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27947; Mature: 27947

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVKILASKKILLLFINLCVFQLYAQQKNSLSQQFLMNIEIRPRVEYTSNYFLPPNDSID
CEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEECCCEEECCCCCCC
PYFIITQRNRISMQYAREKWLIKSDLQEIHLWDENSKASKVGSINFYQLYFETKIKSLNV
CEEEEEECCCEEEHHHHHHHHHHHCHHEEEEECCCCCCCEECCCEEEEEEEEEEEEEEEE
RLGRQSVLLDNGRLFSDAPWAQQGRAHEGIRIMKYSKYFSNDFFFLFTRNYSTEFESAYS
EECCEEEEEECCEEECCCCCHHCCCCCCCEEEEEEEHHHCCCEEEEEEECCCCCHHHHCC
PVASNRYKYLLINSLNYNNNHGFSFNSLNAVDFLENSSSGKLYTRATAGGRIEFKTKQ
CHHCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCEEEEEECC
>Mature Secondary Structure
MIVKILASKKILLLFINLCVFQLYAQQKNSLSQQFLMNIEIRPRVEYTSNYFLPPNDSID
CEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEECCCEEECCCCCCC
PYFIITQRNRISMQYAREKWLIKSDLQEIHLWDENSKASKVGSINFYQLYFETKIKSLNV
CEEEEEECCCEEEHHHHHHHHHHHCHHEEEEECCCCCCCEECCCEEEEEEEEEEEEEEEE
RLGRQSVLLDNGRLFSDAPWAQQGRAHEGIRIMKYSKYFSNDFFFLFTRNYSTEFESAYS
EECCEEEEEECCEEECCCCCHHCCCCCCCEEEEEEEHHHCCCEEEEEEECCCCCHHHHCC
PVASNRYKYLLINSLNYNNNHGFSFNSLNAVDFLENSSSGKLYTRATAGGRIEFKTKQ
CHHCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA